RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 GYG1P46976 350 aa19.74■□□□□ 0.75
LINC01116-202ENST00000339037 IFNLR1Q8IU57 520 aaPredicted RBP19.74■□□□□ 0.75
LINC01116-202ENST00000339037 TDRD7Q8NHU6 1098 aaKnown RBP19.74■□□□□ 0.75
LINC01116-202ENST00000339037 SERPINA10Q9UK55 444 aa19.74■□□□□ 0.75
LINC01116-202ENST00000339037 TTF2Q9UNY4 1162 aaKnown RBP19.74■□□□□ 0.75
LINC01116-202ENST00000339037 ANKRD13AQ8IZ07 590 aa19.73■□□□□ 0.75
LINC01116-202ENST00000339037 USP2O75604 605 aaPredicted RBP19.72■□□□□ 0.75
LINC01116-202ENST00000339037 OTUD7BQ6GQQ9 843 aa19.72■□□□□ 0.75
LINC01116-202ENST00000339037 SUCLG2Q96I99 432 aa19.72■□□□□ 0.75
LINC01116-202ENST00000339037 FAM84BQ96KN1 310 aaPredicted RBP19.72■□□□□ 0.75
LINC01116-202ENST00000339037 PUS3Q9BZE2 481 aaKnown RBP19.72■□□□□ 0.75
LINC01116-202ENST00000339037 ZNF70Q9UC06 446 aaPredicted RBP19.72■□□□□ 0.75
LINC01116-202ENST00000339037 TRIM17Q9Y577 477 aa19.72■□□□□ 0.75
LINC01116-202ENST00000339037 GJA5P36382 358 aa19.71■□□□□ 0.75
LINC01116-202ENST00000339037 KAZALD1Q96I82 304 aa19.71■□□□□ 0.75
LINC01116-202ENST00000339037 MROH5Q6ZUA9 1318 aa19.71■□□□□ 0.75
LINC01116-202ENST00000339037 NBPF7P0C2Y1 421 aaPredicted RBP19.7■□□□□ 0.74
LINC01116-202ENST00000339037 OTOP1Q7RTM1 612 aa19.7■□□□□ 0.74
LINC01116-202ENST00000339037 VPS37DQ86XT2 251 aa19.7■□□□□ 0.74
LINC01116-202ENST00000339037 DZIP1LQ8IYY4 767 aaKnown RBP19.7■□□□□ 0.74
LINC01116-202ENST00000339037 TDRD3Q9H7E2 651 aaKnown RBP19.7■□□□□ 0.74
LINC01116-202ENST00000339037 RIPOR2Q9Y4F9 1068 aa19.7■□□□□ 0.74
LINC01116-202ENST00000339037 CRKP46108 304 aa19.69■□□□□ 0.74
LINC01116-202ENST00000339037 CRHR2Q13324 411 aa19.69■□□□□ 0.74
LINC01116-202ENST00000339037 FAM9BQ8IZU0 186 aa19.69■□□□□ 0.74
LINC01116-202ENST00000339037 OPTNQ96CV9 577 aa19.69■□□□□ 0.74
LINC01116-202ENST00000339037 ERO1AQ96HE7 468 aa19.69■□□□□ 0.74
LINC01116-202ENST00000339037 BICC1Q9H694 974 aaKnown RBP19.69■□□□□ 0.74
LINC01116-202ENST00000339037 ELP3Q9H9T3 547 aa19.69■□□□□ 0.74
LINC01116-202ENST00000339037 LAMB1P07942 1786 aa19.69■□□□□ 0.74
LINC01116-202ENST00000339037 UTYO14607 1347 aa19.69■□□□□ 0.74
LINC01116-202ENST00000339037 TNNI2P48788 182 aa19.68■□□□□ 0.74
LINC01116-202ENST00000339037 CDAN1Q8IWY9 1227 aa19.68■□□□□ 0.74
LINC01116-202ENST00000339037 TEPSINQ96N21 525 aa19.68■□□□□ 0.74
LINC01116-202ENST00000339037 ARAP2Q8WZ64 1704 aa19.68■□□□□ 0.74
LINC01116-202ENST00000339037 TESPA1A2RU30 521 aaPredicted RBP19.67■□□□□ 0.74
LINC01116-202ENST00000339037 TCP10L2B9ZVM9 353 aa19.67■□□□□ 0.74
LINC01116-202ENST00000339037 RABL6Q3YEC7 729 aaPredicted RBP19.67■□□□□ 0.74
LINC01116-202ENST00000339037 CAVIN4Q5BKX8 364 aa19.67■□□□□ 0.74
LINC01116-202ENST00000339037 METTL24Q5JXM2 366 aa19.67■□□□□ 0.74
LINC01116-202ENST00000339037 PTPN18Q99952 460 aa19.67■□□□□ 0.74
LINC01116-202ENST00000339037 TMEM39BQ9GZU3 492 aa19.67■□□□□ 0.74
LINC01116-202ENST00000339037 IQSEC3Q9UPP2 1182 aaPredicted RBP19.67■□□□□ 0.74
LINC01116-202ENST00000339037 FRAT2O75474 233 aaPredicted RBP19.66■□□□□ 0.74
LINC01116-202ENST00000339037 CHAF1AQ13111 956 aaPredicted RBP19.66■□□□□ 0.74
LINC01116-202ENST00000339037 INTS3Q68E01 1043 aaKnown RBP19.66■□□□□ 0.74
LINC01116-202ENST00000339037 FBXO33Q7Z6M2 555 aa19.66■□□□□ 0.74
LINC01116-202ENST00000339037 CD99L2Q8TCZ2 262 aa19.66■□□□□ 0.74
LINC01116-202ENST00000339037 TBC1D22AQ8WUA7 517 aa19.66■□□□□ 0.74
LINC01116-202ENST00000339037 OTOFQ9HC10 1997 aa19.66■□□□□ 0.74
LINC01116-202ENST00000339037 SP3Q02447 781 aa19.65■□□□□ 0.74
LINC01116-202ENST00000339037 GRIK5Q16478 980 aa19.65■□□□□ 0.74
LINC01116-202ENST00000339037 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.65■□□□□ 0.74
LINC01116-202ENST00000339037 PCDH10Q9P2E7 1040 aa19.65■□□□□ 0.74
LINC01116-202ENST00000339037 CSADQ9Y600 493 aa19.65■□□□□ 0.74
LINC01116-202ENST00000339037 KIAA0100Q14667 2235 aaKnown RBP19.64■□□□□ 0.74
LINC01116-202ENST00000339037 HDLBPQ00341 1268 aaKnown RBP19.64■□□□□ 0.73
LINC01116-202ENST00000339037 VGLL4Q14135 290 aa19.64■□□□□ 0.73
LINC01116-202ENST00000339037 LRRC24Q50LG9 513 aa19.64■□□□□ 0.73
LINC01116-202ENST00000339037 ANKRD44Q8N8A2 993 aa19.64■□□□□ 0.73
LINC01116-202ENST00000339037 TEKT1Q969V4 418 aa19.64■□□□□ 0.73
LINC01116-202ENST00000339037 MS4A4AQ96JQ5 239 aa19.64■□□□□ 0.73
LINC01116-202ENST00000339037 EFCC1Q9HA90 598 aa19.64■□□□□ 0.73
LINC01116-202ENST00000339037 PTPN22Q9Y2R2 807 aa19.64■□□□□ 0.73
LINC01116-202ENST00000339037 ZNF521Q96K83 1311 aa19.64■□□□□ 0.73
LINC01116-202ENST00000339037 PTPRCP08575 1304 aa19.63■□□□□ 0.73
LINC01116-202ENST00000339037 PDE8BO95263 885 aa19.63■□□□□ 0.73
LINC01116-202ENST00000339037 MAP3K9P80192 1104 aa19.63■□□□□ 0.73
LINC01116-202ENST00000339037 VGLL2Q8N8G2 317 aa19.63■□□□□ 0.73
LINC01116-202ENST00000339037 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.63■□□□□ 0.73
LINC01116-202ENST00000339037 BRI3BPQ8WY22 251 aa19.63■□□□□ 0.73
LINC01116-202ENST00000339037 CCL15-CCL14A0A0B4J2E2 113 aa19.62■□□□□ 0.73
LINC01116-202ENST00000339037 GTF2A2P52657 109 aa19.62■□□□□ 0.73
LINC01116-202ENST00000339037 CACNB3P54284 484 aa19.62■□□□□ 0.73
LINC01116-202ENST00000339037 CCL15Q16663 113 aa19.62■□□□□ 0.73
LINC01116-202ENST00000339037 MRPL50Q8N5N7 158 aaKnown RBP19.62■□□□□ 0.73
LINC01116-202ENST00000339037 OTUD5Q96G74 571 aa19.62■□□□□ 0.73
LINC01116-202ENST00000339037 TMOD2Q9NZR1 351 aa19.62■□□□□ 0.73
LINC01116-202ENST00000339037 POTEFA5A3E0 1075 aa19.61■□□□□ 0.73
LINC01116-202ENST00000339037 BCAMP50895 628 aa19.61■□□□□ 0.73
LINC01116-202ENST00000339037 TAF1CQ15572 869 aaPredicted RBP19.61■□□□□ 0.73
LINC01116-202ENST00000339037 KLHDC4Q8TBB5 520 aa19.61■□□□□ 0.73
LINC01116-202ENST00000339037 ZDHHC15Q96MV8 337 aa19.61■□□□□ 0.73
LINC01116-202ENST00000339037 MAST3O60307 1309 aa19.6■□□□□ 0.73
LINC01116-202ENST00000339037 KIF16BQ96L93 1317 aa19.6■□□□□ 0.73
LINC01116-202ENST00000339037 PUM3Q15397 648 aaKnown RBP19.6■□□□□ 0.73
LINC01116-202ENST00000339037 ARMC5Q96C12 935 aa19.6■□□□□ 0.73
LINC01116-202ENST00000339037 ZFYVE28Q9HCC9 887 aa19.6■□□□□ 0.73
LINC01116-202ENST00000339037 SPDYE5A6NIY4 337 aa19.59■□□□□ 0.73
LINC01116-202ENST00000339037 IFIT1P09914 478 aaKnown RBP19.59■□□□□ 0.73
LINC01116-202ENST00000339037 CAP1Q01518 475 aa19.59■□□□□ 0.73
LINC01116-202ENST00000339037 ARHGEF6Q15052 776 aa19.59■□□□□ 0.73
LINC01116-202ENST00000339037 FAM83AQ86UY5 434 aa19.59■□□□□ 0.73
LINC01116-202ENST00000339037 HOOK2Q96ED9 719 aa19.59■□□□□ 0.73
LINC01116-202ENST00000339037 WRNIP1Q96S55 665 aa19.59■□□□□ 0.73
LINC01116-202ENST00000339037 SUGT1Q9Y2Z0 365 aa19.59■□□□□ 0.73
LINC01116-202ENST00000339037 WDHD1O75717 1129 aaPredicted RBP19.58■□□□□ 0.72
LINC01116-202ENST00000339037 FKBP1CQ5VVH2 108 aa19.58■□□□□ 0.72
LINC01116-202ENST00000339037 APOBEC3HQ6NTF7 200 aaKnown RBP19.58■□□□□ 0.72
LINC01116-202ENST00000339037 FAM43AQ8N2R8 423 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms