RNA–Protein interactions for RNA: ENST00000337908.4

MS4A4A-201, Transcript of membrane spanning 4-domains A4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MS4A4A, Length 1,604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-201ENST00000337908 C6orf229H3BNL8 230 aa12.9□□□□□ -0.34
MS4A4A-201ENST00000337908 ZBTB22O15209 634 aa12.9□□□□□ -0.34
MS4A4A-201ENST00000337908 FGAP02671 866 aa12.9□□□□□ -0.34
MS4A4A-201ENST00000337908 RAB3GAP1Q15042 981 aa12.9□□□□□ -0.34
MS4A4A-201ENST00000337908 DHX32Q7L7V1 743 aaKnown RBP12.9□□□□□ -0.34
MS4A4A-201ENST00000337908 DZIP1Q86YF9 867 aaKnown RBP12.9□□□□□ -0.34
MS4A4A-201ENST00000337908 STRBPQ96SI9 672 aaKnown RBP12.9□□□□□ -0.34
MS4A4A-201ENST00000337908 ANO8Q9HCE9 1232 aaPredicted RBP12.9□□□□□ -0.34
MS4A4A-201ENST00000337908 SMC3Q9UQE7 1217 aa12.9□□□□□ -0.34
MS4A4A-201ENST00000337908 LAMA4Q16363 1823 aa12.9□□□□□ -0.34
MS4A4A-201ENST00000337908 LRRC37AA6NMS7 1700 aa12.9□□□□□ -0.34
MS4A4A-201ENST00000337908 COL1A1P02452 1464 aaPredicted RBP12.89□□□□□ -0.35
MS4A4A-201ENST00000337908 H0YIN7 160 aa12.89□□□□□ -0.35
MS4A4A-201ENST00000337908 GOLGA6L22H0YM25 854 aa12.89□□□□□ -0.35
MS4A4A-201ENST00000337908 SRGNP10124 158 aa12.89□□□□□ -0.35
MS4A4A-201ENST00000337908 PTMSP20962 102 aa12.89□□□□□ -0.35
MS4A4A-201ENST00000337908 TDO2P48775 406 aa12.89□□□□□ -0.35
MS4A4A-201ENST00000337908 Q6ZUG5 572 aa12.89□□□□□ -0.35
MS4A4A-201ENST00000337908 C2CD5Q86YS7 1000 aa12.89□□□□□ -0.35
MS4A4A-201ENST00000337908 NCOA7Q8NI08 942 aa12.89□□□□□ -0.35
MS4A4A-201ENST00000337908 ZNF622Q969S3 477 aaKnown RBP eCLIP12.89□□□□□ -0.35
MS4A4A-201ENST00000337908 CHMP4CQ96CF2 233 aa12.89□□□□□ -0.35
MS4A4A-201ENST00000337908 NOL10Q9BSC4 688 aaKnown RBP12.89□□□□□ -0.35
MS4A4A-201ENST00000337908 ARMT1Q9H993 441 aa12.89□□□□□ -0.35
MS4A4A-201ENST00000337908 PODXL2Q9NZ53 605 aa12.89□□□□□ -0.35
MS4A4A-201ENST00000337908 ATP6V0A2Q9Y487 856 aa12.89□□□□□ -0.35
MS4A4A-201ENST00000337908 SLC4A4Q9Y6R1 1079 aa12.89□□□□□ -0.35
MS4A4A-201ENST00000337908 ZMYM6O95789 1325 aa12.89□□□□□ -0.35
MS4A4A-201ENST00000337908 WTIPA6NIX2 430 aaPredicted RBP12.88□□□□□ -0.35
MS4A4A-201ENST00000337908 DDX11L8A8MPP1 907 aa12.88□□□□□ -0.35
MS4A4A-201ENST00000337908 HAND2P61296 217 aa12.88□□□□□ -0.35
MS4A4A-201ENST00000337908 GSTO1P78417 241 aa12.88□□□□□ -0.35
MS4A4A-201ENST00000337908 ALX1Q15699 326 aa12.88□□□□□ -0.35
MS4A4A-201ENST00000337908 TTLL5Q6EMB2 1281 aa12.88□□□□□ -0.35
MS4A4A-201ENST00000337908 G3V3G9 751 aa12.88□□□□□ -0.35
MS4A4A-201ENST00000337908 LDHBP07195 334 aaKnown RBP12.88□□□□□ -0.35
MS4A4A-201ENST00000337908 DCAF8Q5TAQ9 597 aa12.88□□□□□ -0.35
MS4A4A-201ENST00000337908 CCDC125Q86Z20 511 aa12.88□□□□□ -0.35
MS4A4A-201ENST00000337908 CCDC83Q8IWF9 413 aa12.88□□□□□ -0.35
MS4A4A-201ENST00000337908 MIGA1Q8NAN2 632 aa12.88□□□□□ -0.35
MS4A4A-201ENST00000337908 TCEANC2Q96MN5 208 aa12.88□□□□□ -0.35
MS4A4A-201ENST00000337908 LARP6Q9BRS8 491 aaKnown RBP12.88□□□□□ -0.35
MS4A4A-201ENST00000337908 TAF6LQ9Y6J9 622 aa12.88□□□□□ -0.35
MS4A4A-201ENST00000337908 COL11A2P13942 1736 aaPredicted RBP12.87□□□□□ -0.35
MS4A4A-201ENST00000337908 SALL1Q9NSC2 1324 aa12.87□□□□□ -0.35
MS4A4A-201ENST00000337908 MCM5P33992 734 aa12.87□□□□□ -0.35
MS4A4A-201ENST00000337908 STYK1Q6J9G0 422 aa12.87□□□□□ -0.35
MS4A4A-201ENST00000337908 DPP8Q6V1X1 898 aaPredicted RBP12.87□□□□□ -0.35
MS4A4A-201ENST00000337908 STOX1Q6ZVD7 989 aa12.87□□□□□ -0.35
MS4A4A-201ENST00000337908 TXNRD3Q86VQ6 643 aa12.87□□□□□ -0.35
MS4A4A-201ENST00000337908 IFNL3Q8IZI9 196 aa12.87□□□□□ -0.35
MS4A4A-201ENST00000337908 LCORLQ8N3X6 602 aa12.87□□□□□ -0.35
MS4A4A-201ENST00000337908 MPNDQ8N594 471 aa12.87□□□□□ -0.35
MS4A4A-201ENST00000337908 TDRD7Q8NHU6 1098 aaKnown RBP12.87□□□□□ -0.35
MS4A4A-201ENST00000337908 TBC1D16Q8TBP0 767 aa12.87□□□□□ -0.35
MS4A4A-201ENST00000337908 TNPO1Q92973 898 aaKnown RBP12.87□□□□□ -0.35
MS4A4A-201ENST00000337908 EYA3Q99504 573 aa12.87□□□□□ -0.35
MS4A4A-201ENST00000337908 IRS2Q9Y4H2 1338 aa12.87□□□□□ -0.35
MS4A4A-201ENST00000337908 CACNA1SQ13698 1873 aa12.86□□□□□ -0.35
MS4A4A-201ENST00000337908 LDHCP07864 332 aa12.86□□□□□ -0.35
MS4A4A-201ENST00000337908 MECOMQ03112 1051 aa12.86□□□□□ -0.35
MS4A4A-201ENST00000337908 DEFB132Q7Z7B7 95 aa12.86□□□□□ -0.35
MS4A4A-201ENST00000337908 CNKSR1Q969H4 720 aa12.86□□□□□ -0.35
MS4A4A-201ENST00000337908 CNNM2Q9H8M5 875 aa12.86□□□□□ -0.35
MS4A4A-201ENST00000337908 CD209Q9NNX6 404 aa12.86□□□□□ -0.35
MS4A4A-201ENST00000337908 TPCN1Q9ULQ1 816 aa12.86□□□□□ -0.35
MS4A4A-201ENST00000337908 NAP1L2Q9ULW6 460 aaPredicted RBP12.86□□□□□ -0.35
MS4A4A-201ENST00000337908 WDR19Q8NEZ3 1342 aa12.86□□□□□ -0.35
MS4A4A-201ENST00000337908 FOXP2O15409 715 aa12.85□□□□□ -0.35
MS4A4A-201ENST00000337908 PDIA4P13667 645 aaKnown RBP12.85□□□□□ -0.35
MS4A4A-201ENST00000337908 MCM4P33991 863 aa12.85□□□□□ -0.35
MS4A4A-201ENST00000337908 TOB2Q14106 344 aaPredicted RBP12.85□□□□□ -0.35
MS4A4A-201ENST00000337908 ME3Q16798 604 aa12.85□□□□□ -0.35
MS4A4A-201ENST00000337908 SLF2Q8IX21 1173 aa12.85□□□□□ -0.35
MS4A4A-201ENST00000337908 SLC16A10Q8TF71 515 aa12.85□□□□□ -0.35
MS4A4A-201ENST00000337908 TBC1D22AQ8WUA7 517 aa12.85□□□□□ -0.35
MS4A4A-201ENST00000337908 BRF1Q92994 677 aa12.85□□□□□ -0.35
MS4A4A-201ENST00000337908 NSUN4Q96CB9 384 aaKnown RBP12.85□□□□□ -0.35
MS4A4A-201ENST00000337908 CRNKL1Q9BZJ0 848 aaKnown RBP12.85□□□□□ -0.35
MS4A4A-201ENST00000337908 ZC3H12CQ9C0D7 883 aaKnown RBP12.85□□□□□ -0.35
MS4A4A-201ENST00000337908 RNF41Q9H4P4 317 aaPredicted RBP12.85□□□□□ -0.35
MS4A4A-201ENST00000337908 CHD4Q14839 1912 aa12.85□□□□□ -0.35
MS4A4A-201ENST00000337908 KIAA1551Q9HCM1 1747 aa12.85□□□□□ -0.35
MS4A4A-201ENST00000337908 WDR33Q9C0J8 1336 aaKnown RBP12.85□□□□□ -0.35
MS4A4A-201ENST00000337908 IL1R1P14778 569 aa12.84□□□□□ -0.35
MS4A4A-201ENST00000337908 CERS3Q8IU89 383 aa12.84□□□□□ -0.35
MS4A4A-201ENST00000337908 GPR101Q96P66 508 aaPredicted RBP12.84□□□□□ -0.35
MS4A4A-201ENST00000337908 KRT23Q9C075 422 aa12.84□□□□□ -0.35
MS4A4A-201ENST00000337908 COA1Q9GZY4 146 aa12.84□□□□□ -0.35
MS4A4A-201ENST00000337908 JAG2Q9Y219 1238 aa12.84□□□□□ -0.35
MS4A4A-201ENST00000337908 GSG1L2A8MUP6 293 aa12.84□□□□□ -0.35
MS4A4A-201ENST00000337908 PRC1O43663 620 aa12.84□□□□□ -0.35
MS4A4A-201ENST00000337908 LARGE1O95461 756 aa12.84□□□□□ -0.35
MS4A4A-201ENST00000337908 BAG3O95817 575 aa12.84□□□□□ -0.35
MS4A4A-201ENST00000337908 PRDX5P30044 214 aa12.84□□□□□ -0.35
MS4A4A-201ENST00000337908 EXOSC10Q01780 885 aaKnown RBP12.84□□□□□ -0.35
MS4A4A-201ENST00000337908 STK3Q13188 491 aa12.84□□□□□ -0.35
MS4A4A-201ENST00000337908 MFSD6Q6ZSS7 791 aa12.84□□□□□ -0.35
MS4A4A-201ENST00000337908 NECAB1Q8N987 351 aa12.84□□□□□ -0.35
MS4A4A-201ENST00000337908 LRRC2Q9BYS8 371 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms