RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 TBC1D2Q9BYX2 928 aa10.79□□□□□ -0.68
FNDC3B-201ENST00000336824 GJB2P29033 226 aa10.79□□□□□ -0.68
FNDC3B-201ENST00000336824 GTF2IP78347 998 aa10.79□□□□□ -0.68
FNDC3B-201ENST00000336824 CAVIN1Q6NZI2 390 aaKnown RBP10.79□□□□□ -0.68
FNDC3B-201ENST00000336824 CCDC144CPQ8IYA2 1237 aa10.79□□□□□ -0.68
FNDC3B-201ENST00000336824 ARHGEF1Q92888 912 aaKnown RBP10.79□□□□□ -0.68
FNDC3B-201ENST00000336824 MAGEC2Q9UBF1 373 aaPredicted RBP10.79□□□□□ -0.68
FNDC3B-201ENST00000336824 NWD1Q149M9 1564 aa10.79□□□□□ -0.68
FNDC3B-201ENST00000336824 PARP4Q9UKK3 1724 aaKnown RBP10.79□□□□□ -0.68
FNDC3B-201ENST00000336824 SGSM2O43147 1006 aa10.79□□□□□ -0.68
FNDC3B-201ENST00000336824 RTKN2Q8IZC4 609 aa10.79□□□□□ -0.68
FNDC3B-201ENST00000336824 SNX21Q969T3 373 aa10.79□□□□□ -0.68
FNDC3B-201ENST00000336824 PYM1Q9BRP8 204 aaKnown RBP10.79□□□□□ -0.68
FNDC3B-201ENST00000336824 PICK1Q9NRD5 415 aa10.79□□□□□ -0.68
FNDC3B-201ENST00000336824 C8orf34Q49A92 452 aa10.79□□□□□ -0.68
FNDC3B-201ENST00000336824 ARHGEF10LQ9HCE6 1279 aa10.79□□□□□ -0.68
FNDC3B-201ENST00000336824 CCDC93Q567U6 631 aa10.79□□□□□ -0.68
FNDC3B-201ENST00000336824 DSCC1Q9BVC3 393 aa10.79□□□□□ -0.68
FNDC3B-201ENST00000336824 TTF2Q9UNY4 1162 aaKnown RBP10.79□□□□□ -0.68
FNDC3B-201ENST00000336824 COL14A1Q05707 1796 aaKnown RBP10.79□□□□□ -0.68
FNDC3B-201ENST00000336824 CCDC192P0DO97 292 aa10.78□□□□□ -0.68
FNDC3B-201ENST00000336824 EAF2Q96CJ1 260 aaPredicted RBP10.78□□□□□ -0.68
FNDC3B-201ENST00000336824 ARMT1Q9H993 441 aa10.78□□□□□ -0.68
FNDC3B-201ENST00000336824 CNTNAP4Q9C0A0 1308 aa10.78□□□□□ -0.68
FNDC3B-201ENST00000336824 MED1Q15648 1581 aaPredicted RBP10.78□□□□□ -0.68
FNDC3B-201ENST00000336824 TTLL5Q6EMB2 1281 aa10.78□□□□□ -0.68
FNDC3B-201ENST00000336824 USP26Q9BXU7 913 aa10.78□□□□□ -0.68
FNDC3B-201ENST00000336824 ARPP21Q9UBL0 812 aaPredicted RBP10.78□□□□□ -0.68
FNDC3B-201ENST00000336824 STX6O43752 255 aa10.78□□□□□ -0.68
FNDC3B-201ENST00000336824 CALML3P27482 149 aa10.78□□□□□ -0.68
FNDC3B-201ENST00000336824 TICAM2Q86XR7 235 aa10.78□□□□□ -0.68
FNDC3B-201ENST00000336824 OTUD7AQ8TE49 926 aaPredicted RBP10.78□□□□□ -0.68
FNDC3B-201ENST00000336824 CCDC39Q9UFE4 941 aa10.78□□□□□ -0.68
FNDC3B-201ENST00000336824 BMP15O95972 392 aa10.78□□□□□ -0.68
FNDC3B-201ENST00000336824 DALRD3Q5D0E6 543 aaKnown RBP10.78□□□□□ -0.68
FNDC3B-201ENST00000336824 STAP2Q9UGK3 403 aa10.78□□□□□ -0.68
FNDC3B-201ENST00000336824 B4DLN1 442 aa10.78□□□□□ -0.68
FNDC3B-201ENST00000336824 MRPL12P52815 198 aaKnown RBP10.78□□□□□ -0.68
FNDC3B-201ENST00000336824 WDR78Q5VTH9 848 aa10.78□□□□□ -0.68
FNDC3B-201ENST00000336824 TMED8Q6PL24 325 aaPredicted RBP10.78□□□□□ -0.68
FNDC3B-201ENST00000336824 SMC2O95347 1197 aa10.78□□□□□ -0.68
FNDC3B-201ENST00000336824 RBM25P49756 843 aaKnown RBP10.78□□□□□ -0.68
FNDC3B-201ENST00000336824 VAT1LQ9HCJ6 419 aa10.78□□□□□ -0.68
FNDC3B-201ENST00000336824 GYG1P46976 350 aa10.77□□□□□ -0.68
FNDC3B-201ENST00000336824 FILIP1LQ4L180 1135 aa10.77□□□□□ -0.68
FNDC3B-201ENST00000336824 TTLL6Q8N841 843 aa10.77□□□□□ -0.68
FNDC3B-201ENST00000336824 ISCA1Q9BUE6 129 aa10.77□□□□□ -0.68
FNDC3B-201ENST00000336824 TTLL11Q8NHH1 800 aa10.77□□□□□ -0.68
FNDC3B-201ENST00000336824 TMX3Q96JJ7 454 aa10.77□□□□□ -0.68
FNDC3B-201ENST00000336824 RRP36Q96EU6 259 aaKnown RBP10.77□□□□□ -0.69
FNDC3B-201ENST00000336824 BCAMP50895 628 aa10.77□□□□□ -0.69
FNDC3B-201ENST00000336824 TBC1D9BQ66K14 1250 aa10.77□□□□□ -0.69
FNDC3B-201ENST00000336824 PATL2C9JE40 543 aaKnown RBP10.77□□□□□ -0.69
FNDC3B-201ENST00000336824 ARHGAP27Q6ZUM4 889 aa10.77□□□□□ -0.69
FNDC3B-201ENST00000336824 POLA2Q14181 598 aa10.77□□□□□ -0.69
FNDC3B-201ENST00000336824 PCP11498 1178 aaKnown RBP10.76□□□□□ -0.69
FNDC3B-201ENST00000336824 TSPY26PQ9H489 355 aa10.76□□□□□ -0.69
FNDC3B-201ENST00000336824 DLG5Q8TDM6 1919 aa10.76□□□□□ -0.69
FNDC3B-201ENST00000336824 SAP30BPQ9UHR5 308 aaKnown RBP10.76□□□□□ -0.69
FNDC3B-201ENST00000336824 ROBO1Q9Y6N7 1651 aa10.76□□□□□ -0.69
FNDC3B-201ENST00000336824 PPP2R5BQ15173 497 aa10.76□□□□□ -0.69
FNDC3B-201ENST00000336824 IGKV5-2P06315 115 aa10.76□□□□□ -0.69
FNDC3B-201ENST00000336824 FAM227BQ96M60 508 aa10.76□□□□□ -0.69
FNDC3B-201ENST00000336824 OSBPL3Q9H4L5 887 aa10.76□□□□□ -0.69
FNDC3B-201ENST00000336824 SLC27A2O14975 620 aa10.76□□□□□ -0.69
FNDC3B-201ENST00000336824 EN1Q05925 392 aaPredicted RBP10.76□□□□□ -0.69
FNDC3B-201ENST00000336824 ALG1Q9BT22 464 aa10.76□□□□□ -0.69
FNDC3B-201ENST00000336824 MTX1Q13505 466 aa10.75□□□□□ -0.69
FNDC3B-201ENST00000336824 UBE3CQ15386 1083 aa10.75□□□□□ -0.69
FNDC3B-201ENST00000336824 FNBP4Q8N3X1 1017 aaPredicted RBP10.75□□□□□ -0.69
FNDC3B-201ENST00000336824 NUP62CLQ9H1M0 184 aa10.75□□□□□ -0.69
FNDC3B-201ENST00000336824 TCP11L1Q9NUJ3 509 aa10.75□□□□□ -0.69
FNDC3B-201ENST00000336824 RPS6KB1P23443 525 aa10.75□□□□□ -0.69
FNDC3B-201ENST00000336824 GUCY1B3Q02153 619 aa10.75□□□□□ -0.69
FNDC3B-201ENST00000336824 PTPN12Q05209 780 aaKnown RBP10.75□□□□□ -0.69
FNDC3B-201ENST00000336824 DHX8Q14562 1220 aaKnown RBP10.75□□□□□ -0.69
FNDC3B-201ENST00000336824 SEC31BQ9NQW1 1179 aa10.75□□□□□ -0.69
FNDC3B-201ENST00000336824 PIM2Q9P1W9 311 aa10.75□□□□□ -0.69
FNDC3B-201ENST00000336824 PARP1P09874 1014 aaKnown RBP10.75□□□□□ -0.69
FNDC3B-201ENST00000336824 FERMT3Q86UX7 667 aa10.75□□□□□ -0.69
FNDC3B-201ENST00000336824 HOMER1Q86YM7 354 aa10.75□□□□□ -0.69
FNDC3B-201ENST00000336824 FBXO41Q8TF61 875 aa10.75□□□□□ -0.69
FNDC3B-201ENST00000336824 ANGEL1Q9UNK9 670 aaKnown RBP10.75□□□□□ -0.69
FNDC3B-201ENST00000336824 ADCY9O60503 1353 aa10.75□□□□□ -0.69
FNDC3B-201ENST00000336824 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.75□□□□□ -0.69
FNDC3B-201ENST00000336824 AK9Q5TCS8 1911 aa10.75□□□□□ -0.69
FNDC3B-201ENST00000336824 TOPAZ1Q8N9V7 1692 aa10.75□□□□□ -0.69
FNDC3B-201ENST00000336824 SLIT3O75094 1523 aa10.75□□□□□ -0.69
FNDC3B-201ENST00000336824 PDE6AP16499 860 aa10.75□□□□□ -0.69
FNDC3B-201ENST00000336824 LRRC2Q9BYS8 371 aa10.75□□□□□ -0.69
FNDC3B-201ENST00000336824 ZHX3Q9H4I2 956 aa10.75□□□□□ -0.69
FNDC3B-201ENST00000336824 INTS4Q96HW7 963 aaKnown RBP10.75□□□□□ -0.69
FNDC3B-201ENST00000336824 GNA11P29992 359 aa10.74□□□□□ -0.69
FNDC3B-201ENST00000336824 PPP4R3AQ6IN85 833 aa10.74□□□□□ -0.69
FNDC3B-201ENST00000336824 CCDC125Q86Z20 511 aa10.74□□□□□ -0.69
FNDC3B-201ENST00000336824 DBNLQ9UJU6 430 aaKnown RBP10.74□□□□□ -0.69
FNDC3B-201ENST00000336824 CCDC129Q6ZRS4 1044 aa10.74□□□□□ -0.69
FNDC3B-201ENST00000336824 HEATR3Q7Z4Q2 680 aa10.74□□□□□ -0.69
FNDC3B-201ENST00000336824 PUS3Q9BZE2 481 aaKnown RBP10.74□□□□□ -0.69
FNDC3B-201ENST00000336824 NBPF26B4DH59 902 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms