RNA–Protein interactions for RNA: ENST00000334475.10

TREM1-202, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM1, Length 1,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-202ENST00000334475 ITPK1Q13572 414 aa10.6□□□□□ -0.71
TREM1-202ENST00000334475 PUM3Q15397 648 aaKnown RBP10.6□□□□□ -0.71
TREM1-202ENST00000334475 CCDC152Q4G0S7 254 aa10.6□□□□□ -0.71
TREM1-202ENST00000334475 CCDC129Q6ZRS4 1044 aa10.6□□□□□ -0.71
TREM1-202ENST00000334475 DHX32Q7L7V1 743 aaKnown RBP10.6□□□□□ -0.71
TREM1-202ENST00000334475 LINC00116Q8NCU8 138 aa10.6□□□□□ -0.71
TREM1-202ENST00000334475 LPIN2Q92539 896 aa10.6□□□□□ -0.71
TREM1-202ENST00000334475 GTF3C6Q969F1 213 aa10.6□□□□□ -0.71
TREM1-202ENST00000334475 TMEM106CQ9BVX2 250 aa10.6□□□□□ -0.71
TREM1-202ENST00000334475 GPBP1L1Q9HC44 474 aaPredicted RBP10.6□□□□□ -0.71
TREM1-202ENST00000334475 TBC1D2BQ9UPU7 963 aa10.6□□□□□ -0.71
TREM1-202ENST00000334475 KIF3AQ9Y496 699 aa10.6□□□□□ -0.71
TREM1-202ENST00000334475 WDR19Q8NEZ3 1342 aa10.59□□□□□ -0.71
TREM1-202ENST00000334475 LETM1O95202 739 aaPredicted RBP10.59□□□□□ -0.71
TREM1-202ENST00000334475 SLC5A1P13866 664 aa10.59□□□□□ -0.71
TREM1-202ENST00000334475 FGFR2P21802 821 aa10.59□□□□□ -0.71
TREM1-202ENST00000334475 ADORA1P30542 326 aa10.59□□□□□ -0.71
TREM1-202ENST00000334475 HTRA3P83110 453 aa10.59□□□□□ -0.71
TREM1-202ENST00000334475 UBE3CQ15386 1083 aa10.59□□□□□ -0.71
TREM1-202ENST00000334475 LRSAM1Q6UWE0 723 aa10.59□□□□□ -0.71
TREM1-202ENST00000334475 FAM43AQ8N2R8 423 aa10.59□□□□□ -0.71
TREM1-202ENST00000334475 ANP32BQ92688 251 aaKnown RBP10.59□□□□□ -0.71
TREM1-202ENST00000334475 NDUFB9Q9Y6M9 179 aa10.59□□□□□ -0.71
TREM1-202ENST00000334475 MYO5AQ9Y4I1 1855 aaKnown RBP10.59□□□□□ -0.71
TREM1-202ENST00000334475 ZMYM6O95789 1325 aa10.58□□□□□ -0.71
TREM1-202ENST00000334475 M0R2C6 588 aa10.58□□□□□ -0.72
TREM1-202ENST00000334475 PFKFB2O60825 505 aa10.58□□□□□ -0.72
TREM1-202ENST00000334475 NTSR2O95665 410 aa10.58□□□□□ -0.72
TREM1-202ENST00000334475 UBE2HP62256 183 aa10.58□□□□□ -0.72
TREM1-202ENST00000334475 HMGN5P82970 282 aaKnown RBP10.58□□□□□ -0.72
TREM1-202ENST00000334475 EXOSC10Q01780 885 aaKnown RBP10.58□□□□□ -0.72
TREM1-202ENST00000334475 FKBP4Q02790 459 aaKnown RBP eCLIP10.58□□□□□ -0.72
TREM1-202ENST00000334475 CCDC173Q0VFZ6 552 aa10.58□□□□□ -0.72
TREM1-202ENST00000334475 IMMTQ16891 758 aaKnown RBP10.58□□□□□ -0.72
TREM1-202ENST00000334475 IER5LQ5T953 404 aa10.58□□□□□ -0.72
TREM1-202ENST00000334475 SUSD4Q5VX71 490 aa10.58□□□□□ -0.72
TREM1-202ENST00000334475 LARP1BQ659C4 914 aaKnown RBP10.58□□□□□ -0.72
TREM1-202ENST00000334475 Q6ZUG5 572 aa10.58□□□□□ -0.72
TREM1-202ENST00000334475 GAS2L3Q86XJ1 694 aa10.58□□□□□ -0.72
TREM1-202ENST00000334475 RGS22Q8NE09 1264 aa10.58□□□□□ -0.72
TREM1-202ENST00000334475 PCDHB8Q9UN66 801 aa10.58□□□□□ -0.72
TREM1-202ENST00000334475 TIAM2Q8IVF5 1701 aa10.58□□□□□ -0.72
TREM1-202ENST00000334475 ELP1O95163 1332 aa10.58□□□□□ -0.72
TREM1-202ENST00000334475 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.57□□□□□ -0.72
TREM1-202ENST00000334475 E7EWF7 191 aa10.57□□□□□ -0.72
TREM1-202ENST00000334475 ADD2P35612 726 aa10.57□□□□□ -0.72
TREM1-202ENST00000334475 IGHMBP2P38935 993 aaKnown RBP10.57□□□□□ -0.72
TREM1-202ENST00000334475 MCAMP43121 646 aa10.57□□□□□ -0.72
TREM1-202ENST00000334475 ZAP70P43403 619 aa10.57□□□□□ -0.72
TREM1-202ENST00000334475 EVCP57679 992 aa10.57□□□□□ -0.72
TREM1-202ENST00000334475 KRT85P78386 507 aa10.57□□□□□ -0.72
TREM1-202ENST00000334475 WASHC4Q2M389 1173 aa10.57□□□□□ -0.72
TREM1-202ENST00000334475 RC3H1Q5TC82 1133 aaKnown RBP10.57□□□□□ -0.72
TREM1-202ENST00000334475 FOXD4L5Q5VV16 416 aaPredicted RBP10.57□□□□□ -0.72
TREM1-202ENST00000334475 STOX1Q6ZVD7 989 aa10.57□□□□□ -0.72
TREM1-202ENST00000334475 USP48Q86UV5 1035 aa10.57□□□□□ -0.72
TREM1-202ENST00000334475 NECAB1Q8N987 351 aa10.57□□□□□ -0.72
TREM1-202ENST00000334475 SMARCC2Q8TAQ2 1214 aa10.57□□□□□ -0.72
TREM1-202ENST00000334475 FOXD4L4Q8WXT5 416 aaPredicted RBP10.57□□□□□ -0.72
TREM1-202ENST00000334475 OSBP2Q969R2 916 aa10.57□□□□□ -0.72
TREM1-202ENST00000334475 ZNF274Q96GC6 653 aaPredicted RBP10.57□□□□□ -0.72
TREM1-202ENST00000334475 CCDC85AQ96PX6 553 aaPredicted RBP10.57□□□□□ -0.72
TREM1-202ENST00000334475 CDC5LQ99459 802 aaKnown RBP10.57□□□□□ -0.72
TREM1-202ENST00000334475 MPHOSPH8Q99549 860 aa10.57□□□□□ -0.72
TREM1-202ENST00000334475 TMEM63CQ9P1W3 806 aa10.57□□□□□ -0.72
TREM1-202ENST00000334475 TAF6LQ9Y6J9 622 aa10.57□□□□□ -0.72
TREM1-202ENST00000334475 CARMIL3Q8ND23 1372 aa10.56□□□□□ -0.72
TREM1-202ENST00000334475 POTEB2H3BUK9 544 aa10.56□□□□□ -0.72
TREM1-202ENST00000334475 ECM2O94769 699 aaPredicted RBP10.56□□□□□ -0.72
TREM1-202ENST00000334475 NASPP49321 788 aaPredicted RBP10.56□□□□□ -0.72
TREM1-202ENST00000334475 FGD1P98174 961 aa10.56□□□□□ -0.72
TREM1-202ENST00000334475 SCARF1Q14162 830 aa10.56□□□□□ -0.72
TREM1-202ENST00000334475 CCDC102BQ68D86 513 aa10.56□□□□□ -0.72
TREM1-202ENST00000334475 SYNE4Q8N205 404 aa10.56□□□□□ -0.72
TREM1-202ENST00000334475 LARP6Q9BRS8 491 aaKnown RBP10.56□□□□□ -0.72
TREM1-202ENST00000334475 ZSCAN16Q9H4T2 348 aaPredicted RBP10.56□□□□□ -0.72
TREM1-202ENST00000334475 NIP7Q9Y221 180 aaKnown RBP eCLIP10.56□□□□□ -0.72
TREM1-202ENST00000334475 MYH13Q9UKX3 1938 aa10.56□□□□□ -0.72
TREM1-202ENST00000334475 KIF13BQ9NQT8 1826 aa10.56□□□□□ -0.72
TREM1-202ENST00000334475 MAST2Q6P0Q8 1798 aa10.55□□□□□ -0.72
TREM1-202ENST00000334475 VPS37CA5D8V6 355 aaPredicted RBP10.55□□□□□ -0.72
TREM1-202ENST00000334475 GPAA1O43292 621 aa10.55□□□□□ -0.72
TREM1-202ENST00000334475 SF3B3Q15393 1217 aaKnown RBP10.55□□□□□ -0.72
TREM1-202ENST00000334475 CCDC183Q5T5S1 534 aa10.55□□□□□ -0.72
TREM1-202ENST00000334475 FAM184AQ8NB25 1140 aa10.55□□□□□ -0.72
TREM1-202ENST00000334475 NCOA7Q8NI08 942 aa10.55□□□□□ -0.72
TREM1-202ENST00000334475 BRF1Q92994 677 aa10.55□□□□□ -0.72
TREM1-202ENST00000334475 PPP1R9BQ96SB3 815 aa10.55□□□□□ -0.72
TREM1-202ENST00000334475 SCAND2PQ9GZW5 306 aaPredicted RBP10.55□□□□□ -0.72
TREM1-202ENST00000334475 NMRK2Q9NPI5 230 aa10.55□□□□□ -0.72
TREM1-202ENST00000334475 CNPY2Q9Y2B0 182 aa10.55□□□□□ -0.72
TREM1-202ENST00000334475 PCNTO95613 3336 aa10.55□□□□□ -0.72
TREM1-202ENST00000334475 C4AP0C0L4 1744 aa10.55□□□□□ -0.72
TREM1-202ENST00000334475 A0A0G2JLW4 131 aa10.54□□□□□ -0.72
TREM1-202ENST00000334475 CHGBP05060 677 aa10.54□□□□□ -0.72
TREM1-202ENST00000334475 MCM5P33992 734 aa10.54□□□□□ -0.72
TREM1-202ENST00000334475 MAP3K12Q12852 859 aa10.54□□□□□ -0.72
TREM1-202ENST00000334475 ALX1Q15699 326 aa10.54□□□□□ -0.72
TREM1-202ENST00000334475 SLC10A5Q5PT55 438 aa10.54□□□□□ -0.72
TREM1-202ENST00000334475 ATL3Q6DD88 541 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms