RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 ADGRA1Q86SQ6 560 aa14.51□□□□□ -0.09
TRIM49B-201ENST00000332682 TBC1D22AQ8WUA7 517 aa14.51□□□□□ -0.09
TRIM49B-201ENST00000332682 NSUN4Q96CB9 384 aaKnown RBP14.51□□□□□ -0.09
TRIM49B-201ENST00000332682 ZNF277Q9NRM2 450 aaPredicted RBP14.51□□□□□ -0.09
TRIM49B-201ENST00000332682 NFKBIEO00221 500 aa14.51□□□□□ -0.09
TRIM49B-201ENST00000332682 GPAA1O43292 621 aa14.51□□□□□ -0.09
TRIM49B-201ENST00000332682 LDHBP07195 334 aaKnown RBP14.51□□□□□ -0.09
TRIM49B-201ENST00000332682 GRIK5Q16478 980 aa14.51□□□□□ -0.09
TRIM49B-201ENST00000332682 TMED8Q6PL24 325 aaPredicted RBP14.51□□□□□ -0.09
TRIM49B-201ENST00000332682 MAP4K1Q92918 833 aa14.51□□□□□ -0.09
TRIM49B-201ENST00000332682 VPS33BQ9H267 617 aa14.51□□□□□ -0.09
TRIM49B-201ENST00000332682 TAOK3Q9H2K8 898 aa14.51□□□□□ -0.09
TRIM49B-201ENST00000332682 FOXP2O15409 715 aa14.5□□□□□ -0.09
TRIM49B-201ENST00000332682 CYP7A1P22680 504 aa14.5□□□□□ -0.09
TRIM49B-201ENST00000332682 HSPA4P34932 840 aa14.5□□□□□ -0.09
TRIM49B-201ENST00000332682 VPS53Q5VIR6 699 aa14.5□□□□□ -0.09
TRIM49B-201ENST00000332682 TTLL5Q6EMB2 1281 aa14.5□□□□□ -0.09
TRIM49B-201ENST00000332682 NAA16Q6N069 864 aaPredicted RBP14.5□□□□□ -0.09
TRIM49B-201ENST00000332682 DZIP1Q86YF9 867 aaKnown RBP14.5□□□□□ -0.09
TRIM49B-201ENST00000332682 KIF2CQ99661 725 aa14.5□□□□□ -0.09
TRIM49B-201ENST00000332682 SYT17Q9BSW7 474 aa14.5□□□□□ -0.09
TRIM49B-201ENST00000332682 MYH2Q9UKX2 1941 aa14.49□□□□□ -0.09
TRIM49B-201ENST00000332682 LTBP3Q9NS15 1303 aa14.49□□□□□ -0.09
TRIM49B-201ENST00000332682 YDJCA8MPS7 323 aa14.49□□□□□ -0.09
TRIM49B-201ENST00000332682 MBD4O95243 580 aa14.49□□□□□ -0.09
TRIM49B-201ENST00000332682 HSPD1P10809 573 aaKnown RBP14.49□□□□□ -0.09
TRIM49B-201ENST00000332682 LARGE2Q8N3Y3 721 aa14.49□□□□□ -0.09
TRIM49B-201ENST00000332682 CERS5Q8N5B7 392 aa14.49□□□□□ -0.09
TRIM49B-201ENST00000332682 FBXW7Q969H0 707 aa14.49□□□□□ -0.09
TRIM49B-201ENST00000332682 AIDAQ96BJ3 306 aa14.49□□□□□ -0.09
TRIM49B-201ENST00000332682 DSCC1Q9BVC3 393 aa14.49□□□□□ -0.09
TRIM49B-201ENST00000332682 KCNQ5Q9NR82 932 aa14.49□□□□□ -0.09
TRIM49B-201ENST00000332682 PALD1Q9ULE6 856 aa14.49□□□□□ -0.09
TRIM49B-201ENST00000332682 RBM8AQ9Y5S9 174 aaKnown RBP14.49□□□□□ -0.09
TRIM49B-201ENST00000332682 SOCS7O14512 581 aa14.48□□□□□ -0.09
TRIM49B-201ENST00000332682 MCCP23508 829 aa14.48□□□□□ -0.09
TRIM49B-201ENST00000332682 IARSP41252 1262 aaKnown RBP14.48□□□□□ -0.09
TRIM49B-201ENST00000332682 STRIP1Q5VSL9 837 aa14.48□□□□□ -0.09
TRIM49B-201ENST00000332682 MIGA1Q8NAN2 632 aa14.48□□□□□ -0.09
TRIM49B-201ENST00000332682 STRBPQ96SI9 672 aaKnown RBP14.48□□□□□ -0.09
TRIM49B-201ENST00000332682 SUGT1Q9Y2Z0 365 aa14.48□□□□□ -0.09
TRIM49B-201ENST00000332682 NECTIN1Q15223 517 aa14.47□□□□□ -0.09
TRIM49B-201ENST00000332682 DACT2Q5SW24 774 aa14.47□□□□□ -0.09
TRIM49B-201ENST00000332682 LCORLQ8N3X6 602 aa14.47□□□□□ -0.09
TRIM49B-201ENST00000332682 RIOK1Q9BRS2 568 aaKnown RBP14.47□□□□□ -0.09
TRIM49B-201ENST00000332682 MXD3Q9BW11 206 aa14.47□□□□□ -0.09
TRIM49B-201ENST00000332682 ARMT1Q9H993 441 aa14.47□□□□□ -0.09
TRIM49B-201ENST00000332682 MAGEB6P1A0A0J9YX57 407 aa14.46□□□□□ -0.09
TRIM49B-201ENST00000332682 USP17L3A6NCW0 530 aa14.46□□□□□ -0.09
TRIM49B-201ENST00000332682 USP17L4A6NCW7 530 aa14.46□□□□□ -0.09
TRIM49B-201ENST00000332682 ANP32AP39687 249 aaKnown RBP14.46□□□□□ -0.09
TRIM49B-201ENST00000332682 ANAPC15P60006 121 aa14.46□□□□□ -0.09
TRIM49B-201ENST00000332682 FKBP1AP62942 108 aaKnown RBP14.46□□□□□ -0.09
TRIM49B-201ENST00000332682 DIXDC1Q155Q3 683 aa14.46□□□□□ -0.09
TRIM49B-201ENST00000332682 USP17L1Q7RTZ2 530 aa14.46□□□□□ -0.09
TRIM49B-201ENST00000332682 KCNB2Q92953 911 aa14.46□□□□□ -0.09
TRIM49B-201ENST00000332682 IL17RAQ96F46 866 aa14.46□□□□□ -0.09
TRIM49B-201ENST00000332682 U3KPZ7 1027 aaPredicted RBP14.46□□□□□ -0.09
TRIM49B-201ENST00000332682 SRCAPQ6ZRS2 3230 aa14.46□□□□□ -0.09
TRIM49B-201ENST00000332682 GSTO1P78417 241 aa14.46□□□□□ -0.1
TRIM49B-201ENST00000332682 RASSF7Q02833 373 aa14.46□□□□□ -0.1
TRIM49B-201ENST00000332682 NIM1KQ8IY84 436 aa14.46□□□□□ -0.1
TRIM49B-201ENST00000332682 LAMA4Q16363 1823 aa14.45□□□□□ -0.1
TRIM49B-201ENST00000332682 ADAMTSL1Q8N6G6 1762 aa14.45□□□□□ -0.1
TRIM49B-201ENST00000332682 MROH7-TTC4A0A0A0MT08 1334 aa14.45□□□□□ -0.1
TRIM49B-201ENST00000332682 GNAT2P19087 354 aa14.45□□□□□ -0.1
TRIM49B-201ENST00000332682 CREB3L3Q68CJ9 461 aa14.45□□□□□ -0.1
TRIM49B-201ENST00000332682 RASEFQ8IZ41 740 aa14.45□□□□□ -0.1
TRIM49B-201ENST00000332682 ZNRF3Q9ULT6 936 aa14.45□□□□□ -0.1
TRIM49B-201ENST00000332682 SNX14Q9Y5W7 946 aa14.45□□□□□ -0.1
TRIM49B-201ENST00000332682 GAKO14976 1311 aa14.44□□□□□ -0.1
TRIM49B-201ENST00000332682 SLC27A2O14975 620 aa14.44□□□□□ -0.1
TRIM49B-201ENST00000332682 LDHCP07864 332 aa14.44□□□□□ -0.1
TRIM49B-201ENST00000332682 PRELPP51888 382 aa14.44□□□□□ -0.1
TRIM49B-201ENST00000332682 DYNLL1P63167 89 aaKnown RBP14.44□□□□□ -0.1
TRIM49B-201ENST00000332682 FAM163AQ96GL9 167 aaPredicted RBP14.44□□□□□ -0.1
TRIM49B-201ENST00000332682 EPB41L4AQ9HCS5 686 aaPredicted RBP14.44□□□□□ -0.1
TRIM49B-201ENST00000332682 AATFQ9NY61 560 aaKnown RBP eCLIP14.44□□□□□ -0.1
TRIM49B-201ENST00000332682 TTF2Q9UNY4 1162 aaKnown RBP14.44□□□□□ -0.1
TRIM49B-201ENST00000332682 ZMYM6O95789 1325 aa14.43□□□□□ -0.1
TRIM49B-201ENST00000332682 GSG1L2A8MUP6 293 aa14.43□□□□□ -0.1
TRIM49B-201ENST00000332682 F8W031 263 aaPredicted RBP14.43□□□□□ -0.1
TRIM49B-201ENST00000332682 PRKAB2O43741 272 aa14.43□□□□□ -0.1
TRIM49B-201ENST00000332682 FGAP02671 866 aa14.43□□□□□ -0.1
TRIM49B-201ENST00000332682 CYP21A2P08686 494 aa14.43□□□□□ -0.1
TRIM49B-201ENST00000332682 RNF20Q5VTR2 975 aa14.43□□□□□ -0.1
TRIM49B-201ENST00000332682 SLF2Q8IX21 1173 aa14.43□□□□□ -0.1
TRIM49B-201ENST00000332682 TAF6LQ9Y6J9 622 aa14.43□□□□□ -0.1
TRIM49B-201ENST00000332682 SLC4A4Q9Y6R1 1079 aa14.43□□□□□ -0.1
TRIM49B-201ENST00000332682 CDK5RAP2Q96SN8 1893 aa14.43□□□□□ -0.1
TRIM49B-201ENST00000332682 RPAP1Q9BWH6 1393 aaPredicted RBP14.43□□□□□ -0.1
TRIM49B-201ENST00000332682 GPR75-ASB3A0A0A6YYF3 556 aa14.42□□□□□ -0.1
TRIM49B-201ENST00000332682 PATL2C9JE40 543 aaKnown RBP14.42□□□□□ -0.1
TRIM49B-201ENST00000332682 RAD17O75943 681 aa14.42□□□□□ -0.1
TRIM49B-201ENST00000332682 ZKSCAN1P17029 563 aaPredicted RBP14.42□□□□□ -0.1
TRIM49B-201ENST00000332682 PPP4CP60510 307 aa14.42□□□□□ -0.1
TRIM49B-201ENST00000332682 RABEP1Q15276 862 aa14.42□□□□□ -0.1
TRIM49B-201ENST00000332682 JDP2Q8WYK2 163 aa14.42□□□□□ -0.1
TRIM49B-201ENST00000332682 CTNNA3Q9UI47 895 aa14.42□□□□□ -0.1
TRIM49B-201ENST00000332682 DAGLAQ9Y4D2 1042 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms