RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 NAPBQ9H115 298 aa16.48■□□□□ 0.23
TRAIP-201ENST00000331456 NAP1L2Q9ULW6 460 aaPredicted RBP16.48■□□□□ 0.23
TRAIP-201ENST00000331456 ST5P78524 1137 aa16.48■□□□□ 0.23
TRAIP-201ENST00000331456 HMGN5P82970 282 aaKnown RBP16.48■□□□□ 0.23
TRAIP-201ENST00000331456 CHST3Q7LGC8 479 aa16.48■□□□□ 0.23
TRAIP-201ENST00000331456 FAM184AQ8NB25 1140 aa16.48■□□□□ 0.23
TRAIP-201ENST00000331456 GPT2Q8TD30 523 aa16.48■□□□□ 0.23
TRAIP-201ENST00000331456 ARMT1Q9H993 441 aa16.48■□□□□ 0.23
TRAIP-201ENST00000331456 RAI14Q9P0K7 980 aa16.48■□□□□ 0.23
TRAIP-201ENST00000331456 ABCF2Q9UG63 623 aa16.48■□□□□ 0.23
TRAIP-201ENST00000331456 CYP7A1P22680 504 aa16.47■□□□□ 0.23
TRAIP-201ENST00000331456 MRE11P49959 708 aa16.47■□□□□ 0.23
TRAIP-201ENST00000331456 RBM6P78332 1123 aaKnown RBP16.47■□□□□ 0.23
TRAIP-201ENST00000331456 GRAPQ13588 217 aa16.47■□□□□ 0.23
TRAIP-201ENST00000331456 USP48Q86UV5 1035 aa16.47■□□□□ 0.23
TRAIP-201ENST00000331456 IFNL3Q8IZI9 196 aa16.47■□□□□ 0.23
TRAIP-201ENST00000331456 GRAPLQ8TC17 118 aaPredicted RBP16.47■□□□□ 0.23
TRAIP-201ENST00000331456 PDS5AQ29RF7 1337 aaKnown RBP16.47■□□□□ 0.23
TRAIP-201ENST00000331456 GYS1P13807 737 aa16.46■□□□□ 0.23
TRAIP-201ENST00000331456 PDIA3P30101 505 aaKnown RBP16.46■□□□□ 0.23
TRAIP-201ENST00000331456 HIBADHP31937 336 aaKnown RBP16.46■□□□□ 0.23
TRAIP-201ENST00000331456 EVCP57679 992 aa16.46■□□□□ 0.23
TRAIP-201ENST00000331456 SMARCC2Q8TAQ2 1214 aa16.46■□□□□ 0.23
TRAIP-201ENST00000331456 PRR5LQ6MZQ0 368 aa16.46■□□□□ 0.23
TRAIP-201ENST00000331456 RPGRQ92834 1020 aaKnown RBP16.46■□□□□ 0.23
TRAIP-201ENST00000331456 SYAP1Q96A49 352 aaPredicted RBP16.46■□□□□ 0.23
TRAIP-201ENST00000331456 CNPY2Q9Y2B0 182 aa16.46■□□□□ 0.23
TRAIP-201ENST00000331456 SLC4A4Q9Y6R1 1079 aa16.46■□□□□ 0.23
TRAIP-201ENST00000331456 TNRC6CQ9HCJ0 1690 aaKnown RBP16.46■□□□□ 0.23
TRAIP-201ENST00000331456 JAK2O60674 1132 aa16.45■□□□□ 0.22
TRAIP-201ENST00000331456 DTNBO60941 627 aa16.45■□□□□ 0.22
TRAIP-201ENST00000331456 TBC1D10CQ8IV04 446 aa16.45■□□□□ 0.22
TRAIP-201ENST00000331456 WTIPA6NIX2 430 aaPredicted RBP16.45■□□□□ 0.22
TRAIP-201ENST00000331456 GSG1L2A8MUP6 293 aa16.45■□□□□ 0.22
TRAIP-201ENST00000331456 H3BQV1 296 aa16.45■□□□□ 0.22
TRAIP-201ENST00000331456 DHX16O60231 1041 aaKnown RBP16.45■□□□□ 0.22
TRAIP-201ENST00000331456 SERPINB2P05120 415 aa16.45■□□□□ 0.22
TRAIP-201ENST00000331456 TDO2P48775 406 aa16.45■□□□□ 0.22
TRAIP-201ENST00000331456 CCT2P78371 535 aaKnown RBP16.45■□□□□ 0.22
TRAIP-201ENST00000331456 TXNRD1Q16881 649 aa16.45■□□□□ 0.22
TRAIP-201ENST00000331456 IFFO2Q5TF58 517 aa16.45■□□□□ 0.22
TRAIP-201ENST00000331456 CDC37L1Q7L3B6 337 aa16.45■□□□□ 0.22
TRAIP-201ENST00000331456 LCORLQ8N3X6 602 aa16.45■□□□□ 0.22
TRAIP-201ENST00000331456 NSUN7Q8NE18 718 aaKnown RBP16.45■□□□□ 0.22
TRAIP-201ENST00000331456 NBPF3Q9H094 633 aa16.45■□□□□ 0.22
TRAIP-201ENST00000331456 GDPD2Q9HCC8 539 aa16.45■□□□□ 0.22
TRAIP-201ENST00000331456 MAGEB6P1A0A0J9YX57 407 aa16.44■□□□□ 0.22
TRAIP-201ENST00000331456 ANTXR2P58335 489 aa16.44■□□□□ 0.22
TRAIP-201ENST00000331456 ZNF445P59923 1031 aa16.44■□□□□ 0.22
TRAIP-201ENST00000331456 ZSCAN23Q3MJ62 389 aa16.44■□□□□ 0.22
TRAIP-201ENST00000331456 DDX11Q96FC9 970 aa16.44■□□□□ 0.22
TRAIP-201ENST00000331456 CNNM2Q9H8M5 875 aa16.44■□□□□ 0.22
TRAIP-201ENST00000331456 EPB41L4AQ9HCS5 686 aaPredicted RBP16.44■□□□□ 0.22
TRAIP-201ENST00000331456 ANKIB1Q9P2G1 1089 aa16.44■□□□□ 0.22
TRAIP-201ENST00000331456 LEMD3Q9Y2U8 911 aa16.44■□□□□ 0.22
TRAIP-201ENST00000331456 COL1A1P02452 1464 aaPredicted RBP16.44■□□□□ 0.22
TRAIP-201ENST00000331456 KLF18A0A0U1RQI7 1052 aa16.43■□□□□ 0.22
TRAIP-201ENST00000331456 PTPDC1A2A3K4 754 aa16.43■□□□□ 0.22
TRAIP-201ENST00000331456 ZBTB22O15209 634 aa16.43■□□□□ 0.22
TRAIP-201ENST00000331456 NAA16Q6N069 864 aaPredicted RBP16.43■□□□□ 0.22
TRAIP-201ENST00000331456 TMED8Q6PL24 325 aaPredicted RBP16.43■□□□□ 0.22
TRAIP-201ENST00000331456 MIGA1Q8NAN2 632 aa16.43■□□□□ 0.22
TRAIP-201ENST00000331456 GRPEL1Q9HAV7 217 aa16.43■□□□□ 0.22
TRAIP-201ENST00000331456 TFCP2L1Q9NZI6 479 aa16.43■□□□□ 0.22
TRAIP-201ENST00000331456 FIBPO43427 364 aa16.43■□□□□ 0.22
TRAIP-201ENST00000331456 KRT85P78386 507 aa16.43■□□□□ 0.22
TRAIP-201ENST00000331456 DNM1Q05193 864 aaKnown RBP16.43■□□□□ 0.22
TRAIP-201ENST00000331456 RBM17Q96I25 401 aaKnown RBP16.43■□□□□ 0.22
TRAIP-201ENST00000331456 TMEM87BQ96K49 555 aa16.43■□□□□ 0.22
TRAIP-201ENST00000331456 KRT23Q9C075 422 aa16.43■□□□□ 0.22
TRAIP-201ENST00000331456 UBE2HP62256 183 aa16.42■□□□□ 0.22
TRAIP-201ENST00000331456 ANGEL1Q9UNK9 670 aaKnown RBP16.42■□□□□ 0.22
TRAIP-201ENST00000331456 XDHP47989 1333 aa16.42■□□□□ 0.22
TRAIP-201ENST00000331456 GOLGA8BA8MQT2 603 aa16.41■□□□□ 0.22
TRAIP-201ENST00000331456 PRKAB2O43741 272 aa16.41■□□□□ 0.22
TRAIP-201ENST00000331456 CTDNEP1O95476 244 aa16.41■□□□□ 0.22
TRAIP-201ENST00000331456 XRCC6P12956 609 aaKnown RBP eCLIP16.41■□□□□ 0.22
TRAIP-201ENST00000331456 KLRK1P26718 216 aa16.41■□□□□ 0.22
TRAIP-201ENST00000331456 AKNAD1Q5T1N1 836 aa16.41■□□□□ 0.22
TRAIP-201ENST00000331456 MFSD6Q6ZSS7 791 aa16.41■□□□□ 0.22
TRAIP-201ENST00000331456 FERMT3Q86UX7 667 aa16.41■□□□□ 0.22
TRAIP-201ENST00000331456 ZSCAN16Q9H4T2 348 aaPredicted RBP16.41■□□□□ 0.22
TRAIP-201ENST00000331456 NCOA5Q9HCD5 579 aaKnown RBP16.41■□□□□ 0.22
TRAIP-201ENST00000331456 GPHNQ9NQX3 736 aaPredicted RBP16.41■□□□□ 0.22
TRAIP-201ENST00000331456 RBM27Q9P2N5 1060 aaKnown RBP16.41■□□□□ 0.22
TRAIP-201ENST00000331456 B4E1Z4 1266 aa16.41■□□□□ 0.22
TRAIP-201ENST00000331456 GADD45BO75293 160 aaPredicted RBP16.41■□□□□ 0.22
TRAIP-201ENST00000331456 CRY2Q49AN0 593 aa16.41■□□□□ 0.22
TRAIP-201ENST00000331456 SPTY2D1Q68D10 685 aaPredicted RBP16.41■□□□□ 0.22
TRAIP-201ENST00000331456 RNF41Q9H4P4 317 aaPredicted RBP16.41■□□□□ 0.22
TRAIP-201ENST00000331456 TMEM63CQ9P1W3 806 aa16.41■□□□□ 0.22
TRAIP-201ENST00000331456 RGS17Q9UGC6 210 aaPredicted RBP16.41■□□□□ 0.22
TRAIP-201ENST00000331456 BRPF3Q9ULD4 1205 aa16.41■□□□□ 0.22
TRAIP-201ENST00000331456 NSFL1CQ9UNZ2 370 aaKnown RBP16.41■□□□□ 0.22
TRAIP-201ENST00000331456 SH2B2O14492 632 aaPredicted RBP16.4■□□□□ 0.22
TRAIP-201ENST00000331456 PLSCR1O15162 318 aa16.4■□□□□ 0.22
TRAIP-201ENST00000331456 IGSF3O75054 1194 aa16.4■□□□□ 0.22
TRAIP-201ENST00000331456 CTDSPL2Q05D32 466 aa16.4■□□□□ 0.22
TRAIP-201ENST00000331456 CHAF1AQ13111 956 aaPredicted RBP16.4■□□□□ 0.22
TRAIP-201ENST00000331456 CYB5R4Q7L1T6 521 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms