RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 AKAP11Q9UKA4 1901 aa18.21■□□□□ 0.51
CLRN1-203ENST00000328863 THSD7BQ9C0I4 1608 aa18.2■□□□□ 0.5
CLRN1-203ENST00000328863 CNTNAP1P78357 1384 aa18.2■□□□□ 0.5
CLRN1-203ENST00000328863 RAB11FIP3O75154 756 aa18.2■□□□□ 0.5
CLRN1-203ENST00000328863 LDHBP07195 334 aaKnown RBP18.2■□□□□ 0.5
CLRN1-203ENST00000328863 KLRG1Q96E93 195 aa18.2■□□□□ 0.5
CLRN1-203ENST00000328863 CDCA5Q96FF9 252 aa18.2■□□□□ 0.5
CLRN1-203ENST00000328863 DBNDD2Q9BQY9 259 aa18.2■□□□□ 0.5
CLRN1-203ENST00000328863 FMR1Q06787 632 aaKnown RBP eCLIP18.19■□□□□ 0.5
CLRN1-203ENST00000328863 TNFAIP1Q13829 316 aa18.19■□□□□ 0.5
CLRN1-203ENST00000328863 AACSQ86V21 672 aa18.19■□□□□ 0.5
CLRN1-203ENST00000328863 DZIP1Q86YF9 867 aaKnown RBP18.19■□□□□ 0.5
CLRN1-203ENST00000328863 CLASRPQ8N2M8 674 aaKnown RBP18.19■□□□□ 0.5
CLRN1-203ENST00000328863 RHPN1Q8TCX5 695 aa18.19■□□□□ 0.5
CLRN1-203ENST00000328863 CRBNQ96SW2 442 aa18.19■□□□□ 0.5
CLRN1-203ENST00000328863 VEZTQ9HBM0 779 aa18.19■□□□□ 0.5
CLRN1-203ENST00000328863 DBNLQ9UJU6 430 aaKnown RBP18.19■□□□□ 0.5
CLRN1-203ENST00000328863 PPP2R3BQ9Y5P8 575 aa18.19■□□□□ 0.5
CLRN1-203ENST00000328863 DOCK2Q92608 1830 aa18.19■□□□□ 0.5
CLRN1-203ENST00000328863 PRDX5P30044 214 aa18.18■□□□□ 0.5
CLRN1-203ENST00000328863 NF2P35240 595 aa18.18■□□□□ 0.5
CLRN1-203ENST00000328863 GRIK5Q16478 980 aa18.18■□□□□ 0.5
CLRN1-203ENST00000328863 SPTY2D1Q68D10 685 aaPredicted RBP18.18■□□□□ 0.5
CLRN1-203ENST00000328863 SPATA5Q8NB90 893 aa18.18■□□□□ 0.5
CLRN1-203ENST00000328863 TMOD2Q9NZR1 351 aa18.18■□□□□ 0.5
CLRN1-203ENST00000328863 ABCF2Q9UG63 623 aa18.18■□□□□ 0.5
CLRN1-203ENST00000328863 CLRN2A0PK11 232 aa18.17■□□□□ 0.5
CLRN1-203ENST00000328863 RASSF10A6NK89 507 aa18.17■□□□□ 0.5
CLRN1-203ENST00000328863 APBB1O00213 710 aa18.17■□□□□ 0.5
CLRN1-203ENST00000328863 AAMPQ13685 434 aa18.17■□□□□ 0.5
CLRN1-203ENST00000328863 SPDYE2Q495Y8 402 aa18.17■□□□□ 0.5
CLRN1-203ENST00000328863 EAF2Q96CJ1 260 aaPredicted RBP18.17■□□□□ 0.5
CLRN1-203ENST00000328863 PRMT6Q96LA8 375 aaPredicted RBP18.17■□□□□ 0.5
CLRN1-203ENST00000328863 ZDHHC15Q96MV8 337 aa18.17■□□□□ 0.5
CLRN1-203ENST00000328863 IL1RAPL2Q9NP60 686 aa18.17■□□□□ 0.5
CLRN1-203ENST00000328863 HMG20BQ9P0W2 317 aa18.17■□□□□ 0.5
CLRN1-203ENST00000328863 MKRN1Q9UHC7 482 aaKnown RBP18.17■□□□□ 0.5
CLRN1-203ENST00000328863 PCDHAC2Q9Y5I4 1007 aa18.17■□□□□ 0.5
CLRN1-203ENST00000328863 TLL2Q9Y6L7 1015 aa18.17■□□□□ 0.5
CLRN1-203ENST00000328863 MCAMP43121 646 aa18.16■□□□□ 0.5
CLRN1-203ENST00000328863 CST9Q5W186 159 aa18.16■□□□□ 0.5
CLRN1-203ENST00000328863 HHIPL2Q6UWX4 724 aa18.16■□□□□ 0.5
CLRN1-203ENST00000328863 SLF2Q8IX21 1173 aa18.16■□□□□ 0.5
CLRN1-203ENST00000328863 ZNF512BQ96KM6 892 aaPredicted RBP18.16■□□□□ 0.5
CLRN1-203ENST00000328863 MRIQ9BWK5 157 aa18.16■□□□□ 0.5
CLRN1-203ENST00000328863 CCDC8Q9H0W5 538 aaPredicted RBP18.16■□□□□ 0.5
CLRN1-203ENST00000328863 GBA2Q9HCG7 927 aaPredicted RBP18.16■□□□□ 0.5
CLRN1-203ENST00000328863 TLR7Q9NYK1 1049 aaKnown RBP18.16■□□□□ 0.5
CLRN1-203ENST00000328863 IFIT2P09913 472 aaKnown RBP18.15■□□□□ 0.5
CLRN1-203ENST00000328863 TNNI2P48788 182 aa18.15■□□□□ 0.5
CLRN1-203ENST00000328863 PAXIP1Q6ZW49 1069 aaPredicted RBP18.15■□□□□ 0.5
CLRN1-203ENST00000328863 ERICH6Q7L0X2 663 aa18.15■□□□□ 0.5
CLRN1-203ENST00000328863 C2orf69Q8N8R5 385 aa18.15■□□□□ 0.5
CLRN1-203ENST00000328863 LRRCC1Q9C099 1032 aa18.15■□□□□ 0.5
CLRN1-203ENST00000328863 MYO5AQ9Y4I1 1855 aaKnown RBP18.14■□□□□ 0.49
CLRN1-203ENST00000328863 ECE1P42892 770 aa18.14■□□□□ 0.49
CLRN1-203ENST00000328863 FKBP1BP68106 108 aa18.14■□□□□ 0.49
CLRN1-203ENST00000328863 PI16Q6UXB8 463 aa18.14■□□□□ 0.49
CLRN1-203ENST00000328863 SAPCD2Q86UD0 394 aa18.14■□□□□ 0.49
CLRN1-203ENST00000328863 TDRD3Q9H7E2 651 aaKnown RBP18.14■□□□□ 0.49
CLRN1-203ENST00000328863 ZNF70Q9UC06 446 aaPredicted RBP18.14■□□□□ 0.49
CLRN1-203ENST00000328863 SCAF8Q9UPN6 1271 aaKnown RBP18.14■□□□□ 0.49
CLRN1-203ENST00000328863 DIXDC1Q155Q3 683 aa18.13■□□□□ 0.49
CLRN1-203ENST00000328863 DEFB115Q30KQ5 88 aa18.13■□□□□ 0.49
CLRN1-203ENST00000328863 DNAJC5GQ8N7S2 189 aa18.13■□□□□ 0.49
CLRN1-203ENST00000328863 HHIPL1Q96JK4 782 aa18.13■□□□□ 0.49
CLRN1-203ENST00000328863 DEFB129Q9H1M3 183 aa18.13■□□□□ 0.49
CLRN1-203ENST00000328863 DAGLAQ9Y4D2 1042 aa18.13■□□□□ 0.49
CLRN1-203ENST00000328863 RPAP1Q9BWH6 1393 aaPredicted RBP18.13■□□□□ 0.49
CLRN1-203ENST00000328863 OTOFQ9HC10 1997 aa18.12■□□□□ 0.49
CLRN1-203ENST00000328863 IGSF3O75054 1194 aa18.12■□□□□ 0.49
CLRN1-203ENST00000328863 HUNKP57058 714 aa18.12■□□□□ 0.49
CLRN1-203ENST00000328863 GSTO1P78417 241 aa18.12■□□□□ 0.49
CLRN1-203ENST00000328863 DLK2Q6UY11 383 aa18.12■□□□□ 0.49
CLRN1-203ENST00000328863 RAI14Q9P0K7 980 aa18.12■□□□□ 0.49
CLRN1-203ENST00000328863 MROH7-TTC4A0A0A0MT08 1334 aa18.12■□□□□ 0.49
CLRN1-203ENST00000328863 GAKO14976 1311 aa18.12■□□□□ 0.49
CLRN1-203ENST00000328863 AOX1Q06278 1338 aa18.12■□□□□ 0.49
CLRN1-203ENST00000328863 SSC5DA1L4H1 1573 aa18.12■□□□□ 0.49
CLRN1-203ENST00000328863 TTLL12Q14166 644 aaPredicted RBP18.11■□□□□ 0.49
CLRN1-203ENST00000328863 APOBEC3HQ6NTF7 200 aaKnown RBP18.11■□□□□ 0.49
CLRN1-203ENST00000328863 LRP2BPQ9P2M1 347 aa18.11■□□□□ 0.49
CLRN1-203ENST00000328863 SUPT16HQ9Y5B9 1047 aaKnown RBP18.11■□□□□ 0.49
CLRN1-203ENST00000328863 PCDHB15Q9Y5E8 787 aa18.11■□□□□ 0.49
CLRN1-203ENST00000328863 MYH7P12883 1935 aa18.11■□□□□ 0.49
CLRN1-203ENST00000328863 AK9Q5TCS8 1911 aa18.1■□□□□ 0.49
CLRN1-203ENST00000328863 RASA3Q14644 834 aa18.1■□□□□ 0.49
CLRN1-203ENST00000328863 FKBP1CQ5VVH2 108 aa18.1■□□□□ 0.49
CLRN1-203ENST00000328863 BCL11AQ9H165 835 aa18.1■□□□□ 0.49
CLRN1-203ENST00000328863 DCTPP1Q9H773 170 aa18.1■□□□□ 0.49
CLRN1-203ENST00000328863 SNRKQ9NRH2 765 aa18.1■□□□□ 0.49
CLRN1-203ENST00000328863 TCP10L2B9ZVM9 353 aa18.09■□□□□ 0.49
CLRN1-203ENST00000328863 MECOMQ03112 1051 aa18.09■□□□□ 0.49
CLRN1-203ENST00000328863 SUPT20HL1Q3ZLR7 823 aa18.09■□□□□ 0.49
CLRN1-203ENST00000328863 PRAMEF18Q5VWM3 479 aa18.09■□□□□ 0.49
CLRN1-203ENST00000328863 ARMC9Q7Z3E5 817 aa18.09■□□□□ 0.49
CLRN1-203ENST00000328863 JMYQ8N9B5 988 aa18.09■□□□□ 0.49
CLRN1-203ENST00000328863 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.09■□□□□ 0.49
CLRN1-203ENST00000328863 GPATCH3Q96I76 525 aa18.09■□□□□ 0.49
CLRN1-203ENST00000328863 CAPNS2Q96L46 248 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms