RNA–Protein interactions for RNA: ENST00000328619.9

PCP4-201, Transcript of Purkinje cell protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCP4, Length 660 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4-201ENST00000328619 MBD4O95243 580 aa11.69□□□□□ -0.54
PCP4-201ENST00000328619 CYP7A1P22680 504 aa11.69□□□□□ -0.54
PCP4-201ENST00000328619 EXOSC10Q01780 885 aaKnown RBP11.69□□□□□ -0.54
PCP4-201ENST00000328619 OLFM4Q6UX06 510 aa11.69□□□□□ -0.54
PCP4-201ENST00000328619 ERICH6Q7L0X2 663 aa11.69□□□□□ -0.54
PCP4-201ENST00000328619 MPNDQ8N594 471 aa11.69□□□□□ -0.54
PCP4-201ENST00000328619 CNKSR1Q969H4 720 aa11.69□□□□□ -0.54
PCP4-201ENST00000328619 AIDAQ96BJ3 306 aa11.69□□□□□ -0.54
PCP4-201ENST00000328619 INTS4Q96HW7 963 aaKnown RBP11.69□□□□□ -0.54
PCP4-201ENST00000328619 NEK1Q96PY6 1258 aa11.69□□□□□ -0.54
PCP4-201ENST00000328619 SLKQ9H2G2 1235 aaPredicted RBP11.69□□□□□ -0.54
PCP4-201ENST00000328619 EPB41L4AQ9HCS5 686 aaPredicted RBP11.69□□□□□ -0.54
PCP4-201ENST00000328619 RAI14Q9P0K7 980 aa11.69□□□□□ -0.54
PCP4-201ENST00000328619 ABCF2Q9UG63 623 aa11.69□□□□□ -0.54
PCP4-201ENST00000328619 CIZ1Q9ULV3 898 aaPredicted RBP11.69□□□□□ -0.54
PCP4-201ENST00000328619 ZNF646O15015 1829 aaPredicted RBP11.69□□□□□ -0.54
PCP4-201ENST00000328619 MYH2Q9UKX2 1941 aa11.68□□□□□ -0.54
PCP4-201ENST00000328619 FAM205AQ6ZU69 1335 aa11.68□□□□□ -0.54
PCP4-201ENST00000328619 E7EWF7 191 aa11.68□□□□□ -0.54
PCP4-201ENST00000328619 GNAT2P19087 354 aa11.68□□□□□ -0.54
PCP4-201ENST00000328619 CHRNA5P30532 468 aa11.68□□□□□ -0.54
PCP4-201ENST00000328619 MECOMQ03112 1051 aa11.68□□□□□ -0.54
PCP4-201ENST00000328619 SPTY2D1Q68D10 685 aaPredicted RBP11.68□□□□□ -0.54
PCP4-201ENST00000328619 BLOC1S2Q6QNY1 142 aa11.68□□□□□ -0.54
PCP4-201ENST00000328619 LCORLQ8N3X6 602 aa11.68□□□□□ -0.54
PCP4-201ENST00000328619 FBXL16Q8N461 479 aa11.68□□□□□ -0.54
PCP4-201ENST00000328619 ZGPATQ8N5A5 531 aaKnown RBP11.68□□□□□ -0.54
PCP4-201ENST00000328619 SPRYD3Q8NCJ5 442 aa11.68□□□□□ -0.54
PCP4-201ENST00000328619 RTFDC1Q9BY42 306 aaPredicted RBP11.68□□□□□ -0.54
PCP4-201ENST00000328619 AGXT2Q9BYV1 514 aa11.68□□□□□ -0.54
PCP4-201ENST00000328619 NBPF3Q9H094 633 aa11.68□□□□□ -0.54
PCP4-201ENST00000328619 ARMT1Q9H993 441 aa11.68□□□□□ -0.54
PCP4-201ENST00000328619 PDRG1Q9NUG6 133 aa11.68□□□□□ -0.54
PCP4-201ENST00000328619 CHMP5Q9NZZ3 219 aa11.68□□□□□ -0.54
PCP4-201ENST00000328619 TIAM2Q8IVF5 1701 aa11.68□□□□□ -0.54
PCP4-201ENST00000328619 FRAT2O75474 233 aaPredicted RBP11.67□□□□□ -0.54
PCP4-201ENST00000328619 HMGB1P09429 215 aaKnown RBP11.67□□□□□ -0.54
PCP4-201ENST00000328619 KCNA3P22001 575 aa11.67□□□□□ -0.54
PCP4-201ENST00000328619 PRDX5P30044 214 aa11.67□□□□□ -0.54
PCP4-201ENST00000328619 CHAF1AQ13111 956 aaPredicted RBP11.67□□□□□ -0.54
PCP4-201ENST00000328619 TOB2Q14106 344 aaPredicted RBP11.67□□□□□ -0.54
PCP4-201ENST00000328619 IMMTQ16891 758 aaKnown RBP11.67□□□□□ -0.54
PCP4-201ENST00000328619 NAA16Q6N069 864 aaPredicted RBP11.67□□□□□ -0.54
PCP4-201ENST00000328619 IFNL3Q8IZI9 196 aa11.67□□□□□ -0.54
PCP4-201ENST00000328619 UPF1Q92900 1129 aaKnown RBP eCLIP11.67□□□□□ -0.54
PCP4-201ENST00000328619 ZNF622Q969S3 477 aaKnown RBP eCLIP11.67□□□□□ -0.54
PCP4-201ENST00000328619 COA1Q9GZY4 146 aa11.67□□□□□ -0.54
PCP4-201ENST00000328619 LIMCH1Q9UPQ0 1083 aa11.67□□□□□ -0.54
PCP4-201ENST00000328619 BAZ2AQ9UIF9 1905 aaKnown RBP11.66□□□□□ -0.54
PCP4-201ENST00000328619 BRCA1P38398 1863 aaKnown RBP11.66□□□□□ -0.54
PCP4-201ENST00000328619 CDK5RAP2Q96SN8 1893 aa11.66□□□□□ -0.54
PCP4-201ENST00000328619 MAGEB6P1A0A0J9YX57 407 aa11.66□□□□□ -0.54
PCP4-201ENST00000328619 C6orf229H3BNL8 230 aa11.66□□□□□ -0.54
PCP4-201ENST00000328619 PRKAB2O43741 272 aa11.66□□□□□ -0.54
PCP4-201ENST00000328619 GRIK5Q16478 980 aa11.66□□□□□ -0.54
PCP4-201ENST00000328619 CC2D2BQ6DHV5 1058 aa11.66□□□□□ -0.54
PCP4-201ENST00000328619 DPP8Q6V1X1 898 aaPredicted RBP11.66□□□□□ -0.54
PCP4-201ENST00000328619 DHX32Q7L7V1 743 aaKnown RBP11.66□□□□□ -0.54
PCP4-201ENST00000328619 MIGA1Q8NAN2 632 aa11.66□□□□□ -0.54
PCP4-201ENST00000328619 ZSCAN31Q96LW9 406 aaPredicted RBP11.66□□□□□ -0.54
PCP4-201ENST00000328619 CWC22Q9HCG8 908 aaKnown RBP11.66□□□□□ -0.54
PCP4-201ENST00000328619 SCN9AQ15858 1988 aa11.66□□□□□ -0.54
PCP4-201ENST00000328619 ZNF213O14771 459 aa11.65□□□□□ -0.54
PCP4-201ENST00000328619 LARGE1O95461 756 aa11.65□□□□□ -0.54
PCP4-201ENST00000328619 PPP4CP60510 307 aa11.65□□□□□ -0.54
PCP4-201ENST00000328619 ST3GAL1Q11201 340 aa11.65□□□□□ -0.54
PCP4-201ENST00000328619 ANKRD1Q15327 319 aa11.65□□□□□ -0.54
PCP4-201ENST00000328619 GIMAP6Q6P9H5 292 aa11.65□□□□□ -0.54
PCP4-201ENST00000328619 MB21D2Q8IYB1 491 aaPredicted RBP11.65□□□□□ -0.54
PCP4-201ENST00000328619 SGIP1Q9BQI5 828 aa11.65□□□□□ -0.54
PCP4-201ENST00000328619 MTFR1LQ9H019 292 aa11.65□□□□□ -0.54
PCP4-201ENST00000328619 SH2B1Q9NRF2 756 aaPredicted RBP11.65□□□□□ -0.54
PCP4-201ENST00000328619 TPCN1Q9ULQ1 816 aa11.65□□□□□ -0.54
PCP4-201ENST00000328619 JAG2Q9Y219 1238 aa11.65□□□□□ -0.54
PCP4-201ENST00000328619 SLC4A4Q9Y6R1 1079 aa11.65□□□□□ -0.54
PCP4-201ENST00000328619 WDR19Q8NEZ3 1342 aa11.64□□□□□ -0.55
PCP4-201ENST00000328619 LDHBP07195 334 aaKnown RBP11.64□□□□□ -0.55
PCP4-201ENST00000328619 EVCP57679 992 aa11.64□□□□□ -0.55
PCP4-201ENST00000328619 HAND2P61296 217 aa11.64□□□□□ -0.55
PCP4-201ENST00000328619 DYNLL1P63167 89 aaKnown RBP11.64□□□□□ -0.55
PCP4-201ENST00000328619 RAB3GAP1Q15042 981 aa11.64□□□□□ -0.55
PCP4-201ENST00000328619 ME3Q16798 604 aa11.64□□□□□ -0.55
PCP4-201ENST00000328619 GRIPAP1Q4V328 841 aa11.64□□□□□ -0.55
PCP4-201ENST00000328619 TBC1D10CQ8IV04 446 aa11.64□□□□□ -0.55
PCP4-201ENST00000328619 TBC1D22AQ8WUA7 517 aa11.64□□□□□ -0.55
PCP4-201ENST00000328619 FAM163AQ96GL9 167 aaPredicted RBP11.64□□□□□ -0.55
PCP4-201ENST00000328619 TCEANC2Q96MN5 208 aa11.64□□□□□ -0.55
PCP4-201ENST00000328619 EYA3Q99504 573 aa11.64□□□□□ -0.55
PCP4-201ENST00000328619 ZC3H12CQ9C0D7 883 aaKnown RBP11.64□□□□□ -0.55
PCP4-201ENST00000328619 ANAPC4Q9UJX5 808 aa11.64□□□□□ -0.55
PCP4-201ENST00000328619 SUGT1Q9Y2Z0 365 aa11.64□□□□□ -0.55
PCP4-201ENST00000328619 TACC3Q9Y6A5 838 aa11.64□□□□□ -0.55
PCP4-201ENST00000328619 PSME4Q14997 1843 aa11.64□□□□□ -0.55
PCP4-201ENST00000328619 FOCADQ5VW36 1801 aa11.63□□□□□ -0.55
PCP4-201ENST00000328619 RIMBP2O15034 1052 aa11.63□□□□□ -0.55
PCP4-201ENST00000328619 APPP05067 770 aa11.63□□□□□ -0.55
PCP4-201ENST00000328619 HSP90AA1P07900 732 aaKnown RBP11.63□□□□□ -0.55
PCP4-201ENST00000328619 DPEP1P16444 411 aa11.63□□□□□ -0.55
PCP4-201ENST00000328619 ANTXR2P58335 489 aa11.63□□□□□ -0.55
PCP4-201ENST00000328619 Q6ZUG5 572 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms