RNA–Protein interactions for RNA: ENST00000327956.6

SCN5A-201, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best)

Gene SCN5A, Length 335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-201ENST00000327956 WNK4Q96J92 1243 aa21.73■■□□□ 1.07
SCN5A-201ENST00000327956 USP44Q9H0E7 712 aa21.73■■□□□ 1.07
SCN5A-201ENST00000327956 TDRD3Q9H7E2 651 aaKnown RBP21.73■■□□□ 1.07
SCN5A-201ENST00000327956 FZD1Q9UP38 647 aa21.73■■□□□ 1.07
SCN5A-201ENST00000327956 UBTFL1P0CB47 393 aaPredicted RBP21.72■■□□□ 1.07
SCN5A-201ENST00000327956 SLC5A1P13866 664 aa21.72■■□□□ 1.07
SCN5A-201ENST00000327956 FBXO33Q7Z6M2 555 aa21.72■■□□□ 1.07
SCN5A-201ENST00000327956 HDLBPQ00341 1268 aaKnown RBP21.71■■□□□ 1.07
SCN5A-201ENST00000327956 HOOK2Q96ED9 719 aa21.71■■□□□ 1.07
SCN5A-201ENST00000327956 CLMNQ96JQ2 1002 aa21.71■■□□□ 1.07
SCN5A-201ENST00000327956 CFHR5Q9BXR6 569 aa21.71■■□□□ 1.07
SCN5A-201ENST00000327956 KIF16BQ96L93 1317 aa21.71■■□□□ 1.07
SCN5A-201ENST00000327956 SSC5DA1L4H1 1573 aa21.7■■□□□ 1.06
SCN5A-201ENST00000327956 TCP10L2B9ZVM9 353 aa21.7■■□□□ 1.06
SCN5A-201ENST00000327956 IFNL1Q8IU54 200 aa21.7■■□□□ 1.06
SCN5A-201ENST00000327956 KLHDC4Q8TBB5 520 aa21.7■■□□□ 1.06
SCN5A-201ENST00000327956 API5Q9BZZ5 524 aaKnown RBP21.7■■□□□ 1.06
SCN5A-201ENST00000327956 SUGT1Q9Y2Z0 365 aa21.7■■□□□ 1.06
SCN5A-201ENST00000327956 EYA2O00167 538 aa21.69■■□□□ 1.06
SCN5A-201ENST00000327956 SOX10P56693 466 aa21.69■■□□□ 1.06
SCN5A-201ENST00000327956 HPS5Q9UPZ3 1129 aa21.69■■□□□ 1.06
SCN5A-201ENST00000327956 CSADQ9Y600 493 aa21.69■■□□□ 1.06
SCN5A-201ENST00000327956 USP2O75604 605 aaPredicted RBP21.68■■□□□ 1.06
SCN5A-201ENST00000327956 BCAMP50895 628 aa21.68■■□□□ 1.06
SCN5A-201ENST00000327956 VGLL2Q8N8G2 317 aa21.68■■□□□ 1.06
SCN5A-201ENST00000327956 LPIN2Q92539 896 aa21.68■■□□□ 1.06
SCN5A-201ENST00000327956 CDCA7LQ96GN5 454 aa21.68■■□□□ 1.06
SCN5A-201ENST00000327956 GNL3LQ9NVN8 582 aaKnown RBP21.68■■□□□ 1.06
SCN5A-201ENST00000327956 WDHD1O75717 1129 aaPredicted RBP21.67■■□□□ 1.06
SCN5A-201ENST00000327956 FBXO46Q6PJ61 603 aaPredicted RBP21.67■■□□□ 1.06
SCN5A-201ENST00000327956 WDR66Q8TBY9 1149 aa21.67■■□□□ 1.06
SCN5A-201ENST00000327956 ELP3Q9H9T3 547 aa21.67■■□□□ 1.06
SCN5A-201ENST00000327956 FBXO3Q9UK99 471 aa21.67■■□□□ 1.06
SCN5A-201ENST00000327956 AOX1Q06278 1338 aa21.66■■□□□ 1.06
SCN5A-201ENST00000327956 TMEM39BQ9GZU3 492 aa21.66■■□□□ 1.06
SCN5A-201ENST00000327956 CEP126Q9P2H0 1117 aa21.66■■□□□ 1.06
SCN5A-201ENST00000327956 MYH13Q9UKX3 1938 aa21.65■■□□□ 1.06
SCN5A-201ENST00000327956 OPTNQ96CV9 577 aa21.65■■□□□ 1.06
SCN5A-201ENST00000327956 ERO1AQ96HE7 468 aa21.65■■□□□ 1.06
SCN5A-201ENST00000327956 ZDHHC15Q96MV8 337 aa21.65■■□□□ 1.06
SCN5A-201ENST00000327956 MRIQ9BWK5 157 aa21.65■■□□□ 1.06
SCN5A-201ENST00000327956 NOB1Q9ULX3 412 aaKnown RBP21.65■■□□□ 1.06
SCN5A-201ENST00000327956 CCER2I3L3R5 266 aa21.64■■□□□ 1.05
SCN5A-201ENST00000327956 CIAO1O76071 339 aa21.64■■□□□ 1.05
SCN5A-201ENST00000327956 MAP3K9P80192 1104 aa21.64■■□□□ 1.05
SCN5A-201ENST00000327956 SIL1Q9H173 461 aa21.64■■□□□ 1.05
SCN5A-201ENST00000327956 FGFR2P21802 821 aa21.63■■□□□ 1.05
SCN5A-201ENST00000327956 ATP2B3Q16720 1220 aa21.63■■□□□ 1.05
SCN5A-201ENST00000327956 DCAF15Q66K64 600 aa21.63■■□□□ 1.05
SCN5A-201ENST00000327956 HHIPL2Q6UWX4 724 aa21.63■■□□□ 1.05
SCN5A-201ENST00000327956 LAMB1P07942 1786 aa21.62■■□□□ 1.05
SCN5A-201ENST00000327956 IGF2BP3O00425 579 aaKnown RBP eCLIP21.62■■□□□ 1.05
SCN5A-201ENST00000327956 GTF2A2P52657 109 aa21.62■■□□□ 1.05
SCN5A-201ENST00000327956 ARHGEF6Q15052 776 aa21.62■■□□□ 1.05
SCN5A-201ENST00000327956 FKBP1CQ5VVH2 108 aa21.62■■□□□ 1.05
SCN5A-201ENST00000327956 FAM83AQ86UY5 434 aa21.62■■□□□ 1.05
SCN5A-201ENST00000327956 TEPSINQ96N21 525 aa21.62■■□□□ 1.05
SCN5A-201ENST00000327956 TRIM17Q9Y577 477 aa21.62■■□□□ 1.05
SCN5A-201ENST00000327956 OTOFQ9HC10 1997 aa21.61■■□□□ 1.05
SCN5A-201ENST00000327956 IL15P40933 162 aaPredicted RBP21.61■■□□□ 1.05
SCN5A-201ENST00000327956 RFX5P48382 616 aaPredicted RBP21.61■■□□□ 1.05
SCN5A-201ENST00000327956 CACNB3P54284 484 aa21.61■■□□□ 1.05
SCN5A-201ENST00000327956 VGLL4Q14135 290 aa21.61■■□□□ 1.05
SCN5A-201ENST00000327956 TRMT2AQ8IZ69 625 aaKnown RBP21.61■■□□□ 1.05
SCN5A-201ENST00000327956 CRHR2Q13324 411 aa21.6■■□□□ 1.05
SCN5A-201ENST00000327956 GRIK5Q16478 980 aa21.6■■□□□ 1.05
SCN5A-201ENST00000327956 OTUD5Q96G74 571 aa21.6■■□□□ 1.05
SCN5A-201ENST00000327956 R3HDMLQ9H3Y0 253 aa21.6■■□□□ 1.05
SCN5A-201ENST00000327956 LRRFIP2Q9Y608 721 aaKnown RBP21.6■■□□□ 1.05
SCN5A-201ENST00000327956 CCL15-CCL14A0A0B4J2E2 113 aa21.59■■□□□ 1.05
SCN5A-201ENST00000327956 SEMA3EO15041 775 aa21.59■■□□□ 1.05
SCN5A-201ENST00000327956 IPO8O15397 1037 aaKnown RBP21.59■■□□□ 1.05
SCN5A-201ENST00000327956 LDHBP07195 334 aaKnown RBP21.59■■□□□ 1.05
SCN5A-201ENST00000327956 GNAI3P08754 354 aa21.59■■□□□ 1.05
SCN5A-201ENST00000327956 CCL15Q16663 113 aa21.59■■□□□ 1.05
SCN5A-201ENST00000327956 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.59■■□□□ 1.05
SCN5A-201ENST00000327956 ZGPATQ8N5A5 531 aaKnown RBP21.59■■□□□ 1.05
SCN5A-201ENST00000327956 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.59■■□□□ 1.05
SCN5A-201ENST00000327956 WRNIP1Q96S55 665 aa21.59■■□□□ 1.05
SCN5A-201ENST00000327956 DENND2AQ9ULE3 1009 aa21.59■■□□□ 1.05
SCN5A-201ENST00000327956 TESPA1A2RU30 521 aaPredicted RBP21.58■■□□□ 1.05
SCN5A-201ENST00000327956 GJA5P36382 358 aa21.58■■□□□ 1.05
SCN5A-201ENST00000327956 TAF1CQ15572 869 aaPredicted RBP21.58■■□□□ 1.05
SCN5A-201ENST00000327956 ATG9AQ7Z3C6 839 aa21.58■■□□□ 1.05
SCN5A-201ENST00000327956 ZFYVE28Q9HCC9 887 aa21.58■■□□□ 1.05
SCN5A-201ENST00000327956 RPAP1Q9BWH6 1393 aaPredicted RBP21.58■■□□□ 1.04
SCN5A-201ENST00000327956 CETPP11597 493 aa21.57■■□□□ 1.04
SCN5A-201ENST00000327956 SP3Q02447 781 aa21.57■■□□□ 1.04
SCN5A-201ENST00000327956 APOBEC3HQ6NTF7 200 aaKnown RBP21.57■■□□□ 1.04
SCN5A-201ENST00000327956 ERO1BQ86YB8 467 aa21.57■■□□□ 1.04
SCN5A-201ENST00000327956 CDAN1Q8IWY9 1227 aa21.57■■□□□ 1.04
SCN5A-201ENST00000327956 ARHGAP45Q92619 1136 aa21.57■■□□□ 1.04
SCN5A-201ENST00000327956 ZNF341Q9BYN7 854 aa21.57■■□□□ 1.04
SCN5A-201ENST00000327956 INTS3Q68E01 1043 aaKnown RBP21.56■■□□□ 1.04
SCN5A-201ENST00000327956 OTOP1Q7RTM1 612 aa21.56■■□□□ 1.04
SCN5A-201ENST00000327956 SLF2Q8IX21 1173 aa21.56■■□□□ 1.04
SCN5A-201ENST00000327956 EFCC1Q9HA90 598 aa21.56■■□□□ 1.04
SCN5A-201ENST00000327956 AKAP2Q9Y2D5 859 aa21.56■■□□□ 1.04
SCN5A-201ENST00000327956 SPDYE5A6NIY4 337 aa21.55■■□□□ 1.04
SCN5A-201ENST00000327956 RARSP54136 660 aaKnown RBP21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms