RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 MECOMQ03112 1051 aa12.32□□□□□ -0.44
VIPAS39-201ENST00000327028 MFSD14BQ5SR56 506 aa12.32□□□□□ -0.44
VIPAS39-201ENST00000327028 NSUN4Q96CB9 384 aaKnown RBP12.32□□□□□ -0.44
VIPAS39-201ENST00000327028 USP26Q9BXU7 913 aa12.32□□□□□ -0.44
VIPAS39-201ENST00000327028 SUGT1Q9Y2Z0 365 aa12.32□□□□□ -0.44
VIPAS39-201ENST00000327028 STRIP1Q5VSL9 837 aa12.31□□□□□ -0.44
VIPAS39-201ENST00000327028 TTLL5Q6EMB2 1281 aa12.31□□□□□ -0.44
VIPAS39-201ENST00000327028 DZIP1Q86YF9 867 aaKnown RBP12.31□□□□□ -0.44
VIPAS39-201ENST00000327028 ZNF384Q8TF68 577 aa12.31□□□□□ -0.44
VIPAS39-201ENST00000327028 PUS7LQ9H0K6 701 aaKnown RBP12.31□□□□□ -0.44
VIPAS39-201ENST00000327028 CYP7A1P22680 504 aa12.31□□□□□ -0.44
VIPAS39-201ENST00000327028 NAA16Q6N069 864 aaPredicted RBP12.31□□□□□ -0.44
VIPAS39-201ENST00000327028 CCDC129Q6ZRS4 1044 aa12.31□□□□□ -0.44
VIPAS39-201ENST00000327028 NIM1KQ8IY84 436 aa12.31□□□□□ -0.44
VIPAS39-201ENST00000327028 C22orf23Q9BZE7 217 aa12.31□□□□□ -0.44
VIPAS39-201ENST00000327028 YDJCA8MPS7 323 aa12.3□□□□□ -0.44
VIPAS39-201ENST00000327028 GRIK5Q16478 980 aa12.3□□□□□ -0.44
VIPAS39-201ENST00000327028 FBXW7Q969H0 707 aa12.3□□□□□ -0.44
VIPAS39-201ENST00000327028 MYH2Q9UKX2 1941 aa12.3□□□□□ -0.44
VIPAS39-201ENST00000327028 USP17L3A6NCW0 530 aa12.3□□□□□ -0.44
VIPAS39-201ENST00000327028 USP17L4A6NCW7 530 aa12.3□□□□□ -0.44
VIPAS39-201ENST00000327028 RBM25P49756 843 aaKnown RBP12.3□□□□□ -0.44
VIPAS39-201ENST00000327028 GSTO1P78417 241 aa12.3□□□□□ -0.44
VIPAS39-201ENST00000327028 RASSF7Q02833 373 aa12.3□□□□□ -0.44
VIPAS39-201ENST00000327028 DACT2Q5SW24 774 aa12.3□□□□□ -0.44
VIPAS39-201ENST00000327028 USP17L1Q7RTZ2 530 aa12.3□□□□□ -0.44
VIPAS39-201ENST00000327028 CERS5Q8N5B7 392 aa12.3□□□□□ -0.44
VIPAS39-201ENST00000327028 GPAA1O43292 621 aa12.29□□□□□ -0.44
VIPAS39-201ENST00000327028 PTH1RQ03431 593 aa12.29□□□□□ -0.44
VIPAS39-201ENST00000327028 ADGRA1Q86SQ6 560 aa12.29□□□□□ -0.44
VIPAS39-201ENST00000327028 KCNQ5Q9NR82 932 aa12.29□□□□□ -0.44
VIPAS39-201ENST00000327028 ZNRF3Q9ULT6 936 aa12.29□□□□□ -0.44
VIPAS39-201ENST00000327028 DICER1Q9UPY3 1922 aaKnown RBP12.29□□□□□ -0.44
VIPAS39-201ENST00000327028 MBD4O95243 580 aa12.29□□□□□ -0.44
VIPAS39-201ENST00000327028 AIDAQ96BJ3 306 aa12.29□□□□□ -0.44
VIPAS39-201ENST00000327028 DSCC1Q9BVC3 393 aa12.29□□□□□ -0.44
VIPAS39-201ENST00000327028 MCCP23508 829 aa12.28□□□□□ -0.44
VIPAS39-201ENST00000327028 MAP4K1Q92918 833 aa12.28□□□□□ -0.44
VIPAS39-201ENST00000327028 MAGEB6P1A0A0J9YX57 407 aa12.28□□□□□ -0.44
VIPAS39-201ENST00000327028 LDHCP07864 332 aa12.28□□□□□ -0.44
VIPAS39-201ENST00000327028 SLF2Q8IX21 1173 aa12.28□□□□□ -0.44
VIPAS39-201ENST00000327028 JDP2Q8WYK2 163 aa12.28□□□□□ -0.44
VIPAS39-201ENST00000327028 STRBPQ96SI9 672 aaKnown RBP12.28□□□□□ -0.44
VIPAS39-201ENST00000327028 MROH7-TTC4A0A0A0MT08 1334 aa12.28□□□□□ -0.44
VIPAS39-201ENST00000327028 PRELPP51888 382 aa12.27□□□□□ -0.44
VIPAS39-201ENST00000327028 MIGA1Q8NAN2 632 aa12.27□□□□□ -0.44
VIPAS39-201ENST00000327028 RIOK1Q9BRS2 568 aaKnown RBP12.27□□□□□ -0.44
VIPAS39-201ENST00000327028 MXD3Q9BW11 206 aa12.27□□□□□ -0.44
VIPAS39-201ENST00000327028 RBM19Q9Y4C8 960 aaKnown RBP12.27□□□□□ -0.44
VIPAS39-201ENST00000327028 U3KPZ7 1027 aaPredicted RBP12.27□□□□□ -0.44
VIPAS39-201ENST00000327028 MYO3BQ8WXR4 1341 aa12.27□□□□□ -0.44
VIPAS39-201ENST00000327028 SBF1O95248 1867 aa12.27□□□□□ -0.44
VIPAS39-201ENST00000327028 HSPD1P10809 573 aaKnown RBP12.27□□□□□ -0.45
VIPAS39-201ENST00000327028 YBX3P16989 372 aaKnown RBP eCLIP12.27□□□□□ -0.45
VIPAS39-201ENST00000327028 GNAT2P19087 354 aa12.27□□□□□ -0.45
VIPAS39-201ENST00000327028 HSPA4P34932 840 aa12.27□□□□□ -0.45
VIPAS39-201ENST00000327028 DIXDC1Q155Q3 683 aa12.27□□□□□ -0.45
VIPAS39-201ENST00000327028 VPS53Q5VIR6 699 aa12.27□□□□□ -0.45
VIPAS39-201ENST00000327028 ARHGAP27Q6ZUM4 889 aa12.27□□□□□ -0.45
VIPAS39-201ENST00000327028 LCORLQ8N3X6 602 aa12.27□□□□□ -0.45
VIPAS39-201ENST00000327028 FAM163AQ96GL9 167 aaPredicted RBP12.27□□□□□ -0.45
VIPAS39-201ENST00000327028 ARMT1Q9H993 441 aa12.27□□□□□ -0.45
VIPAS39-201ENST00000327028 RBM8AQ9Y5S9 174 aaKnown RBP12.27□□□□□ -0.45
VIPAS39-201ENST00000327028 GAKO14976 1311 aa12.27□□□□□ -0.45
VIPAS39-201ENST00000327028 ADAMTSL1Q8N6G6 1762 aa12.27□□□□□ -0.45
VIPAS39-201ENST00000327028 FOXP2O15409 715 aa12.26□□□□□ -0.45
VIPAS39-201ENST00000327028 VIL1P09327 827 aaKnown RBP12.26□□□□□ -0.45
VIPAS39-201ENST00000327028 TTF2Q9UNY4 1162 aaKnown RBP12.26□□□□□ -0.45
VIPAS39-201ENST00000327028 LAMA4Q16363 1823 aa12.26□□□□□ -0.45
VIPAS39-201ENST00000327028 TIAM2Q8IVF5 1701 aa12.26□□□□□ -0.45
VIPAS39-201ENST00000327028 RPAP1Q9BWH6 1393 aaPredicted RBP12.26□□□□□ -0.45
VIPAS39-201ENST00000327028 RSBN1LQ6PCB5 846 aaPredicted RBP12.26□□□□□ -0.45
VIPAS39-201ENST00000327028 ZMYM6O95789 1325 aa12.25□□□□□ -0.45
VIPAS39-201ENST00000327028 PSMD14O00487 310 aa12.25□□□□□ -0.45
VIPAS39-201ENST00000327028 RAD17O75943 681 aa12.25□□□□□ -0.45
VIPAS39-201ENST00000327028 LMNB1P20700 586 aa12.25□□□□□ -0.45
VIPAS39-201ENST00000327028 CERS3Q8IU89 383 aa12.25□□□□□ -0.45
VIPAS39-201ENST00000327028 NOL10Q9BSC4 688 aaKnown RBP12.25□□□□□ -0.45
VIPAS39-201ENST00000327028 ANAPC15P60006 121 aa12.25□□□□□ -0.45
VIPAS39-201ENST00000327028 PPP4CP60510 307 aa12.25□□□□□ -0.45
VIPAS39-201ENST00000327028 DYNLL1P63167 89 aaKnown RBP12.25□□□□□ -0.45
VIPAS39-201ENST00000327028 HDLBPQ00341 1268 aaKnown RBP12.25□□□□□ -0.45
VIPAS39-201ENST00000327028 NECTIN1Q15223 517 aa12.25□□□□□ -0.45
VIPAS39-201ENST00000327028 KCNB2Q92953 911 aa12.25□□□□□ -0.45
VIPAS39-201ENST00000327028 IL17RAQ96F46 866 aa12.25□□□□□ -0.45
VIPAS39-201ENST00000327028 GPR75-ASB3A0A0A6YYF3 556 aa12.24□□□□□ -0.45
VIPAS39-201ENST00000327028 F8W031 263 aaPredicted RBP12.24□□□□□ -0.45
VIPAS39-201ENST00000327028 CXCL9Q07325 125 aa12.24□□□□□ -0.45
VIPAS39-201ENST00000327028 CIAPIN1Q6FI81 312 aa12.24□□□□□ -0.45
VIPAS39-201ENST00000327028 MRIQ9BWK5 157 aa12.24□□□□□ -0.45
VIPAS39-201ENST00000327028 AATFQ9NY61 560 aaKnown RBP eCLIP12.24□□□□□ -0.45
VIPAS39-201ENST00000327028 DAGLAQ9Y4D2 1042 aa12.24□□□□□ -0.45
VIPAS39-201ENST00000327028 CDK5RAP2Q96SN8 1893 aa12.24□□□□□ -0.45
VIPAS39-201ENST00000327028 PATL2C9JE40 543 aaKnown RBP12.24□□□□□ -0.45
VIPAS39-201ENST00000327028 FZD9O00144 591 aa12.24□□□□□ -0.45
VIPAS39-201ENST00000327028 BAG3O95817 575 aa12.24□□□□□ -0.45
VIPAS39-201ENST00000327028 BTDP43251 543 aa12.24□□□□□ -0.45
VIPAS39-201ENST00000327028 TNIP1Q15025 636 aa12.24□□□□□ -0.45
VIPAS39-201ENST00000327028 ALX1Q15699 326 aa12.24□□□□□ -0.45
VIPAS39-201ENST00000327028 CREB3L3Q68CJ9 461 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms