RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 MAST1Q9Y2H9 1570 aa7.11□□□□□ -1.27
SSH1-202ENST00000326495 ATP8B1O43520 1251 aa7.11□□□□□ -1.27
SSH1-202ENST00000326495 CEP57Q86XR8 500 aa7.11□□□□□ -1.27
SSH1-202ENST00000326495 UIMC1Q96RL1 719 aa7.11□□□□□ -1.27
SSH1-202ENST00000326495 ORC3Q9UBD5 711 aaPredicted RBP7.11□□□□□ -1.27
SSH1-202ENST00000326495 MXRA7P84157 204 aa7.11□□□□□ -1.27
SSH1-202ENST00000326495 SLC8A1P32418 973 aa7.11□□□□□ -1.27
SSH1-202ENST00000326495 SYCP3Q8IZU3 236 aa7.11□□□□□ -1.27
SSH1-202ENST00000326495 MYRIPQ8NFW9 859 aa7.11□□□□□ -1.27
SSH1-202ENST00000326495 MYH3P11055 1940 aa7.11□□□□□ -1.27
SSH1-202ENST00000326495 ABCA5Q8WWZ7 1642 aa7.11□□□□□ -1.27
SSH1-202ENST00000326495 EIF3CLB5ME19 914 aaKnown RBP7.11□□□□□ -1.27
SSH1-202ENST00000326495 KRT13P13646 458 aa7.11□□□□□ -1.27
SSH1-202ENST00000326495 EIF3CQ99613 913 aaKnown RBP7.11□□□□□ -1.27
SSH1-202ENST00000326495 PSMA4P25789 261 aaKnown RBP7.1□□□□□ -1.27
SSH1-202ENST00000326495 CCDC51Q96ER9 411 aa7.1□□□□□ -1.27
SSH1-202ENST00000326495 SCLT1Q96NL6 688 aa7.1□□□□□ -1.27
SSH1-202ENST00000326495 POLR3DP05423 398 aaPredicted RBP7.1□□□□□ -1.27
SSH1-202ENST00000326495 SLC8A3P57103 927 aa7.1□□□□□ -1.27
SSH1-202ENST00000326495 GIMAP6Q6P9H5 292 aa7.1□□□□□ -1.27
SSH1-202ENST00000326495 TOM1L2Q6ZVM7 507 aa7.1□□□□□ -1.27
SSH1-202ENST00000326495 ESR2Q92731 530 aa7.1□□□□□ -1.27
SSH1-202ENST00000326495 STK10O94804 968 aaKnown RBP7.1□□□□□ -1.27
SSH1-202ENST00000326495 F13A1P00488 732 aa7.1□□□□□ -1.27
SSH1-202ENST00000326495 EVCP57679 992 aa7.1□□□□□ -1.27
SSH1-202ENST00000326495 ANKLE2Q86XL3 938 aa7.1□□□□□ -1.27
SSH1-202ENST00000326495 CCDC42Q96M95 316 aa7.1□□□□□ -1.27
SSH1-202ENST00000326495 SPAG5Q96R06 1193 aa7.1□□□□□ -1.27
SSH1-202ENST00000326495 VPS18Q9P253 973 aa7.1□□□□□ -1.27
SSH1-202ENST00000326495 USP16Q9Y5T5 823 aa7.1□□□□□ -1.27
SSH1-202ENST00000326495 SBNO1A3KN83 1393 aa7.1□□□□□ -1.27
SSH1-202ENST00000326495 HOXB7P09629 217 aa7.1□□□□□ -1.27
SSH1-202ENST00000326495 CALCOCO2Q13137 446 aa7.1□□□□□ -1.27
SSH1-202ENST00000326495 ZNF622Q969S3 477 aaKnown RBP eCLIP7.1□□□□□ -1.27
SSH1-202ENST00000326495 HOXC8P31273 242 aa7.1□□□□□ -1.27
SSH1-202ENST00000326495 FYB2Q5VWT5 728 aa7.1□□□□□ -1.27
SSH1-202ENST00000326495 PRDM11Q9NQV5 511 aa7.1□□□□□ -1.27
SSH1-202ENST00000326495 LCMT1Q9UIC8 334 aa7.1□□□□□ -1.27
SSH1-202ENST00000326495 ARHGAP31Q2M1Z3 1444 aa7.1□□□□□ -1.27
SSH1-202ENST00000326495 UBA5Q9GZZ9 404 aa7.1□□□□□ -1.27
SSH1-202ENST00000326495 IFT20Q8IY31 132 aa7.1□□□□□ -1.27
SSH1-202ENST00000326495 TNNQ9UQP3 1299 aa7.1□□□□□ -1.27
SSH1-202ENST00000326495 ABCC5O15440 1437 aa7.1□□□□□ -1.27
SSH1-202ENST00000326495 MAP2P11137 1827 aaKnown RBP7.1□□□□□ -1.27
SSH1-202ENST00000326495 PPP2R3AQ06190 1150 aa7.1□□□□□ -1.27
SSH1-202ENST00000326495 FLIIQ13045 1269 aa7.1□□□□□ -1.27
SSH1-202ENST00000326495 MAGEF1Q9HAY2 307 aa7.1□□□□□ -1.27
SSH1-202ENST00000326495 CWC25Q9NXE8 425 aaPredicted RBP7.1□□□□□ -1.27
SSH1-202ENST00000326495 MAN1A1P33908 653 aa7.1□□□□□ -1.27
SSH1-202ENST00000326495 UBL4BQ8N7F7 174 aa7.1□□□□□ -1.27
SSH1-202ENST00000326495 SEPT8Q92599 483 aa7.1□□□□□ -1.27
SSH1-202ENST00000326495 P3H4Q92791 437 aa7.1□□□□□ -1.27
SSH1-202ENST00000326495 DMRT2Q9Y5R5 561 aa7.1□□□□□ -1.27
SSH1-202ENST00000326495 RANBP6O60518 1105 aaKnown RBP7.09□□□□□ -1.27
SSH1-202ENST00000326495 GNA14O95837 355 aa7.09□□□□□ -1.27
SSH1-202ENST00000326495 PARD3Q8TEW0 1356 aa7.09□□□□□ -1.27
SSH1-202ENST00000326495 A0A1B0GVL5 298 aa7.09□□□□□ -1.27
SSH1-202ENST00000326495 DRC3Q9H069 523 aa7.09□□□□□ -1.27
SSH1-202ENST00000326495 UTP11Q9Y3A2 253 aaKnown RBP7.09□□□□□ -1.27
SSH1-202ENST00000326495 PDE4DIPQ5VU43 2346 aa7.09□□□□□ -1.27
SSH1-202ENST00000326495 ALDH1L1O75891 902 aa7.09□□□□□ -1.27
SSH1-202ENST00000326495 PRIM1P49642 420 aaKnown RBP7.09□□□□□ -1.27
SSH1-202ENST00000326495 NKIRAS1Q9NYS0 192 aa7.09□□□□□ -1.27
SSH1-202ENST00000326495 SDSP20132 328 aa7.09□□□□□ -1.27
SSH1-202ENST00000326495 TBC1D31Q96DN5 1066 aa7.09□□□□□ -1.27
SSH1-202ENST00000326495 SH2D4AQ9H788 454 aa7.09□□□□□ -1.27
SSH1-202ENST00000326495 BIN1O00499 593 aa7.09□□□□□ -1.27
SSH1-202ENST00000326495 RTN1Q16799 776 aa7.09□□□□□ -1.27
SSH1-202ENST00000326495 NEK11Q8NG66 645 aa7.09□□□□□ -1.27
SSH1-202ENST00000326495 CCDC160A6NGH7 325 aa7.09□□□□□ -1.27
SSH1-202ENST00000326495 AKR1B15C9JRZ8 316 aaPredicted RBP7.09□□□□□ -1.27
SSH1-202ENST00000326495 GBP7Q8N8V2 638 aaPredicted RBP7.09□□□□□ -1.27
SSH1-202ENST00000326495 ESYT1Q9BSJ8 1104 aa7.09□□□□□ -1.27
SSH1-202ENST00000326495 C6orf50Q9HD87 102 aa7.09□□□□□ -1.27
SSH1-202ENST00000326495 CNPY2Q9Y2B0 182 aa7.09□□□□□ -1.27
SSH1-202ENST00000326495 IBTKQ9P2D0 1353 aaPredicted RBP7.09□□□□□ -1.27
SSH1-202ENST00000326495 ZBTB43O43298 467 aa7.09□□□□□ -1.27
SSH1-202ENST00000326495 STX10O60499 249 aa7.09□□□□□ -1.27
SSH1-202ENST00000326495 RBM5P52756 815 aaKnown RBP eCLIP7.09□□□□□ -1.27
SSH1-202ENST00000326495 ZNF445P59923 1031 aa7.09□□□□□ -1.27
SSH1-202ENST00000326495 CCDC62Q6P9F0 684 aa7.09□□□□□ -1.27
SSH1-202ENST00000326495 MMRN2Q9H8L6 949 aa7.09□□□□□ -1.27
SSH1-202ENST00000326495 GIPC1O14908 333 aa7.09□□□□□ -1.27
SSH1-202ENST00000326495 CASQ2O14958 399 aaPredicted RBP7.09□□□□□ -1.27
SSH1-202ENST00000326495 THAP12O43422 761 aa7.09□□□□□ -1.27
SSH1-202ENST00000326495 IQUBQ8NA54 791 aa7.09□□□□□ -1.27
SSH1-202ENST00000326495 CCDC97Q96F63 343 aaPredicted RBP7.09□□□□□ -1.27
SSH1-202ENST00000326495 CAPZA3Q96KX2 299 aa7.09□□□□□ -1.27
SSH1-202ENST00000326495 SYNCQ9H7C4 482 aa7.09□□□□□ -1.27
SSH1-202ENST00000326495 TRIM35Q9UPQ4 493 aa7.09□□□□□ -1.27
SSH1-202ENST00000326495 MINDY4BA8MYZ0 360 aa7.09□□□□□ -1.28
SSH1-202ENST00000326495 PLCD1P51178 756 aa7.09□□□□□ -1.28
SSH1-202ENST00000326495 CCT2P78371 535 aaKnown RBP7.09□□□□□ -1.28
SSH1-202ENST00000326495 MUM1L1Q5H9M0 696 aa7.09□□□□□ -1.28
SSH1-202ENST00000326495 PRC1O43663 620 aa7.09□□□□□ -1.28
SSH1-202ENST00000326495 CDAN1Q8IWY9 1227 aa7.09□□□□□ -1.28
SSH1-202ENST00000326495 CRNKL1Q9BZJ0 848 aaKnown RBP7.09□□□□□ -1.28
SSH1-202ENST00000326495 MYO1AQ9UBC5 1043 aa7.09□□□□□ -1.28
SSH1-202ENST00000326495 PSDA5PKW4 1024 aaPredicted RBP7.08□□□□□ -1.28
SSH1-202ENST00000326495 MGEA5O60502 916 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms