RNA–Protein interactions for RNA: ENST00000326039.3

GRTP1-201, Transcript of growth hormone regulated TBC protein 1, humanhuman

TSL 1 (best) BASIC

Gene GRTP1, Length 1,294 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRTP1-201ENST00000326039 ZNF408Q9H9D4 720 aa25.32■■□□□ 1.64
GRTP1-201ENST00000326039 COL1A1P02452 1464 aaPredicted RBP25.32■■□□□ 1.64
GRTP1-201ENST00000326039 AOX1Q06278 1338 aa25.32■■□□□ 1.64
GRTP1-201ENST00000326039 WDR33Q9C0J8 1336 aaKnown RBP25.32■■□□□ 1.64
GRTP1-201ENST00000326039 CYP4F22Q6NT55 531 aa25.31■■□□□ 1.64
GRTP1-201ENST00000326039 ERC1Q8IUD2 1116 aa25.31■■□□□ 1.64
GRTP1-201ENST00000326039 EAF2Q96CJ1 260 aaPredicted RBP25.31■■□□□ 1.64
GRTP1-201ENST00000326039 CDCA5Q96FF9 252 aa25.31■■□□□ 1.64
GRTP1-201ENST00000326039 TLL2Q9Y6L7 1015 aa25.31■■□□□ 1.64
GRTP1-201ENST00000326039 TRPM7Q96QT4 1865 aa25.31■■□□□ 1.64
GRTP1-201ENST00000326039 SALL1Q9NSC2 1324 aa25.31■■□□□ 1.64
GRTP1-201ENST00000326039 TNS4Q8IZW8 715 aa25.3■■□□□ 1.64
GRTP1-201ENST00000326039 DBNDD2Q9BQY9 259 aa25.3■■□□□ 1.64
GRTP1-201ENST00000326039 PDS5AQ29RF7 1337 aaKnown RBP25.3■■□□□ 1.64
GRTP1-201ENST00000326039 MYO1BO43795 1136 aa25.29■■□□□ 1.64
GRTP1-201ENST00000326039 ARID4AP29374 1257 aaPredicted RBP25.29■■□□□ 1.64
GRTP1-201ENST00000326039 PRAMEF18Q5VWM3 479 aa25.29■■□□□ 1.64
GRTP1-201ENST00000326039 SAPCD2Q86UD0 394 aa25.29■■□□□ 1.64
GRTP1-201ENST00000326039 APOBEC3FQ8IUX4 373 aaKnown RBP25.29■■□□□ 1.64
GRTP1-201ENST00000326039 RHPN1Q8TCX5 695 aa25.29■■□□□ 1.64
GRTP1-201ENST00000326039 HMG20BQ9P0W2 317 aa25.29■■□□□ 1.64
GRTP1-201ENST00000326039 CLRN2A0PK11 232 aa25.28■■□□□ 1.64
GRTP1-201ENST00000326039 CAPN15O75808 1086 aa25.28■■□□□ 1.64
GRTP1-201ENST00000326039 PRDX5P30044 214 aa25.28■■□□□ 1.64
GRTP1-201ENST00000326039 TEKT1Q969V4 418 aa25.28■■□□□ 1.64
GRTP1-201ENST00000326039 CAPNS2Q96L46 248 aa25.28■■□□□ 1.64
GRTP1-201ENST00000326039 CCDC8Q9H0W5 538 aaPredicted RBP25.28■■□□□ 1.64
GRTP1-201ENST00000326039 LDHBP07195 334 aaKnown RBP25.27■■□□□ 1.64
GRTP1-201ENST00000326039 UQCRFS1P1P0C7P4 283 aa25.27■■□□□ 1.64
GRTP1-201ENST00000326039 HHIPL2Q6UWX4 724 aa25.27■■□□□ 1.64
GRTP1-201ENST00000326039 SPATA5Q8NB90 893 aa25.27■■□□□ 1.64
GRTP1-201ENST00000326039 ZDHHC15Q96MV8 337 aa25.27■■□□□ 1.64
GRTP1-201ENST00000326039 TDRD3Q9H7E2 651 aaKnown RBP25.27■■□□□ 1.64
GRTP1-201ENST00000326039 WBP1LQ9NX94 342 aa25.27■■□□□ 1.64
GRTP1-201ENST00000326039 ZNF70Q9UC06 446 aaPredicted RBP25.27■■□□□ 1.64
GRTP1-201ENST00000326039 DBNLQ9UJU6 430 aaKnown RBP25.27■■□□□ 1.64
GRTP1-201ENST00000326039 MAST3O60307 1309 aa25.27■■□□□ 1.64
GRTP1-201ENST00000326039 RAB11FIP3O75154 756 aa25.26■■□□□ 1.63
GRTP1-201ENST00000326039 CCDC158Q5M9N0 1113 aa25.26■■□□□ 1.63
GRTP1-201ENST00000326039 APOBEC3HQ6NTF7 200 aaKnown RBP25.26■■□□□ 1.63
GRTP1-201ENST00000326039 CRBNQ96SW2 442 aa25.26■■□□□ 1.63
GRTP1-201ENST00000326039 DEFB129Q9H1M3 183 aa25.26■■□□□ 1.63
GRTP1-201ENST00000326039 GBA2Q9HCG7 927 aaPredicted RBP25.26■■□□□ 1.63
GRTP1-201ENST00000326039 TLR7Q9NYK1 1049 aaKnown RBP25.26■■□□□ 1.63
GRTP1-201ENST00000326039 MCAMP43121 646 aa25.25■■□□□ 1.63
GRTP1-201ENST00000326039 SPDYE2Q495Y8 402 aa25.25■■□□□ 1.63
GRTP1-201ENST00000326039 PI16Q6UXB8 463 aa25.25■■□□□ 1.63
GRTP1-201ENST00000326039 ZGPATQ8N5A5 531 aaKnown RBP25.25■■□□□ 1.63
GRTP1-201ENST00000326039 C2orf69Q8N8R5 385 aa25.25■■□□□ 1.63
GRTP1-201ENST00000326039 KIF1BPQ96EK5 621 aa25.25■■□□□ 1.63
GRTP1-201ENST00000326039 ZNF512BQ96KM6 892 aaPredicted RBP25.25■■□□□ 1.63
GRTP1-201ENST00000326039 IL1RAPL2Q9NP60 686 aa25.25■■□□□ 1.63
GRTP1-201ENST00000326039 PCDHB15Q9Y5E8 787 aa25.25■■□□□ 1.63
GRTP1-201ENST00000326039 APBB1O00213 710 aa25.24■■□□□ 1.63
GRTP1-201ENST00000326039 AOC2O75106 756 aa25.24■■□□□ 1.63
GRTP1-201ENST00000326039 TTC39AQ5SRH9 613 aa25.24■■□□□ 1.63
GRTP1-201ENST00000326039 VEZTQ9HBM0 779 aa25.24■■□□□ 1.63
GRTP1-201ENST00000326039 ABCF2Q9UG63 623 aa25.24■■□□□ 1.63
GRTP1-201ENST00000326039 DIXDC1Q155Q3 683 aa25.23■■□□□ 1.63
GRTP1-201ENST00000326039 SPTY2D1Q68D10 685 aaPredicted RBP25.23■■□□□ 1.63
GRTP1-201ENST00000326039 AACSQ86V21 672 aa25.23■■□□□ 1.63
GRTP1-201ENST00000326039 AIDAQ96BJ3 306 aa25.23■■□□□ 1.63
GRTP1-201ENST00000326039 HHIPL1Q96JK4 782 aa25.23■■□□□ 1.63
GRTP1-201ENST00000326039 POLR2AP24928 1970 aaKnown RBP25.22■■□□□ 1.63
GRTP1-201ENST00000326039 TBC1D9Q6ZT07 1266 aa25.22■■□□□ 1.63
GRTP1-201ENST00000326039 LBX1P52954 281 aa25.21■■□□□ 1.63
GRTP1-201ENST00000326039 HUNKP57058 714 aa25.21■■□□□ 1.63
GRTP1-201ENST00000326039 RASA3Q14644 834 aa25.21■■□□□ 1.63
GRTP1-201ENST00000326039 CLASRPQ8N2M8 674 aaKnown RBP25.21■■□□□ 1.63
GRTP1-201ENST00000326039 DCTPP1Q9H773 170 aa25.21■■□□□ 1.63
GRTP1-201ENST00000326039 SNRKQ9NRH2 765 aa25.21■■□□□ 1.63
GRTP1-201ENST00000326039 PPP2R3BQ9Y5P8 575 aa25.21■■□□□ 1.63
GRTP1-201ENST00000326039 THSD7BQ9C0I4 1608 aa25.21■■□□□ 1.63
GRTP1-201ENST00000326039 FKBP1BP68106 108 aa25.2■■□□□ 1.62
GRTP1-201ENST00000326039 FAM163AQ96GL9 167 aaPredicted RBP25.2■■□□□ 1.62
GRTP1-201ENST00000326039 DAGLAQ9Y4D2 1042 aa25.2■■□□□ 1.62
GRTP1-201ENST00000326039 SUPT16HQ9Y5B9 1047 aaKnown RBP25.2■■□□□ 1.62
GRTP1-201ENST00000326039 CTCFP49711 727 aaPredicted RBP25.19■■□□□ 1.62
GRTP1-201ENST00000326039 ERICH6Q7L0X2 663 aa25.19■■□□□ 1.62
GRTP1-201ENST00000326039 ARAP2Q8WZ64 1704 aa25.19■■□□□ 1.62
GRTP1-201ENST00000326039 TCP10L2B9ZVM9 353 aa25.18■■□□□ 1.62
GRTP1-201ENST00000326039 HSPA8P11142 646 aaKnown RBP25.18■■□□□ 1.62
GRTP1-201ENST00000326039 ECE1P42892 770 aa25.18■■□□□ 1.62
GRTP1-201ENST00000326039 MECOMQ03112 1051 aa25.18■■□□□ 1.62
GRTP1-201ENST00000326039 MOB2Q70IA6 237 aa25.18■■□□□ 1.62
GRTP1-201ENST00000326039 ZNF384Q8TF68 577 aa25.18■■□□□ 1.62
GRTP1-201ENST00000326039 CYP2E1P05181 493 aaPredicted RBP25.17■■□□□ 1.62
GRTP1-201ENST00000326039 NF2P35240 595 aa25.17■■□□□ 1.62
GRTP1-201ENST00000326039 ZAP70P43403 619 aa25.17■■□□□ 1.62
GRTP1-201ENST00000326039 CACNB3P54284 484 aa25.17■■□□□ 1.62
GRTP1-201ENST00000326039 TNFAIP1Q13829 316 aa25.17■■□□□ 1.62
GRTP1-201ENST00000326039 FKBP1CQ5VVH2 108 aa25.17■■□□□ 1.62
GRTP1-201ENST00000326039 CDC42EP5Q6NZY7 148 aa25.17■■□□□ 1.62
GRTP1-201ENST00000326039 DZIP1Q86YF9 867 aaKnown RBP25.17■■□□□ 1.62
GRTP1-201ENST00000326039 TSKSQ9UJT2 592 aa25.17■■□□□ 1.62
GRTP1-201ENST00000326039 MAP2K1Q02750 393 aaPredicted RBP25.16■■□□□ 1.62
GRTP1-201ENST00000326039 SUPT20HL1Q3ZLR7 823 aa25.16■■□□□ 1.62
GRTP1-201ENST00000326039 NBPF12Q5TAG4 269 aaPredicted RBP25.16■■□□□ 1.62
GRTP1-201ENST00000326039 SLF2Q8IX21 1173 aa25.16■■□□□ 1.62
GRTP1-201ENST00000326039 NSUN4Q96CB9 384 aaKnown RBP25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms