RNA–Protein interactions for RNA: ENST00000323848.13

SRRM1-201, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRRM1, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-201ENST00000323848 GTF3C6Q969F1 213 aa15.8■□□□□ 0.12
SRRM1-201ENST00000323848 TMX1Q9H3N1 280 aa15.8■□□□□ 0.12
SRRM1-201ENST00000323848 NRXN3Q9Y4C0 1643 aa15.79■□□□□ 0.12
SRRM1-201ENST00000323848 CUL4AQ13619 759 aa15.79■□□□□ 0.12
SRRM1-201ENST00000323848 PTF1AQ7RTS3 328 aa15.79■□□□□ 0.12
SRRM1-201ENST00000323848 LEO1Q8WVC0 666 aaPredicted RBP15.79■□□□□ 0.12
SRRM1-201ENST00000323848 ZBTB9Q96C00 473 aa15.79■□□□□ 0.12
SRRM1-201ENST00000323848 USP28Q96RU2 1077 aa15.79■□□□□ 0.12
SRRM1-201ENST00000323848 SLIT1O75093 1534 aa15.79■□□□□ 0.12
SRRM1-201ENST00000323848 RPS8P62241 208 aaKnown RBP15.79■□□□□ 0.12
SRRM1-201ENST00000323848 RTN1Q16799 776 aa15.79■□□□□ 0.12
SRRM1-201ENST00000323848 ZMYM1Q5SVZ6 1142 aa15.79■□□□□ 0.12
SRRM1-201ENST00000323848 STOX1Q6ZVD7 989 aa15.79■□□□□ 0.12
SRRM1-201ENST00000323848 ZNF444Q8N0Y2 327 aaPredicted RBP15.79■□□□□ 0.12
SRRM1-201ENST00000323848 CTCFLQ8NI51 663 aaPredicted RBP15.79■□□□□ 0.12
SRRM1-201ENST00000323848 MST1RQ04912 1400 aa15.79■□□□□ 0.12
SRRM1-201ENST00000323848 NR1I2O75469 434 aa15.79■□□□□ 0.12
SRRM1-201ENST00000323848 CYP2E1P05181 493 aaPredicted RBP15.79■□□□□ 0.12
SRRM1-201ENST00000323848 IL6STP40189 918 aaPredicted RBP15.79■□□□□ 0.12
SRRM1-201ENST00000323848 IFIT1BQ5T764 474 aaKnown RBP15.79■□□□□ 0.12
SRRM1-201ENST00000323848 CNBD1Q8NA66 436 aa15.79■□□□□ 0.12
SRRM1-201ENST00000323848 PLIN2Q99541 437 aa15.79■□□□□ 0.12
SRRM1-201ENST00000323848 BRMS1Q9HCU9 246 aa15.79■□□□□ 0.12
SRRM1-201ENST00000323848 AFMP43652 599 aa15.78■□□□□ 0.12
SRRM1-201ENST00000323848 TYRO3Q06418 890 aa15.78■□□□□ 0.12
SRRM1-201ENST00000323848 TOB2Q14106 344 aaPredicted RBP15.78■□□□□ 0.12
SRRM1-201ENST00000323848 RFX5P48382 616 aaPredicted RBP15.78■□□□□ 0.12
SRRM1-201ENST00000323848 CCDC34Q96HJ3 373 aa15.78■□□□□ 0.12
SRRM1-201ENST00000323848 PCMTD1Q96MG8 357 aaPredicted RBP15.78■□□□□ 0.12
SRRM1-201ENST00000323848 USP17L12C9JPN9 530 aa15.78■□□□□ 0.12
SRRM1-201ENST00000323848 USP17L21D6R901 530 aa15.78■□□□□ 0.12
SRRM1-201ENST00000323848 OLFM4Q6UX06 510 aa15.78■□□□□ 0.12
SRRM1-201ENST00000323848 NLRP5P59047 1200 aa15.78■□□□□ 0.12
SRRM1-201ENST00000323848 HIBADHP31937 336 aaKnown RBP15.77■□□□□ 0.12
SRRM1-201ENST00000323848 PTPN21Q16825 1174 aa15.77■□□□□ 0.12
SRRM1-201ENST00000323848 CATIPQ7Z7H3 387 aa15.77■□□□□ 0.12
SRRM1-201ENST00000323848 STAMQ92783 540 aa15.77■□□□□ 0.12
SRRM1-201ENST00000323848 CELF1Q92879 486 aaKnown RBP15.77■□□□□ 0.12
SRRM1-201ENST00000323848 TM6SF1Q9BZW5 370 aa15.77■□□□□ 0.12
SRRM1-201ENST00000323848 ANGEL1Q9UNK9 670 aaKnown RBP15.77■□□□□ 0.12
SRRM1-201ENST00000323848 SSBP05455 408 aaKnown RBP eCLIP15.77■□□□□ 0.11
SRRM1-201ENST00000323848 PDIA3P30101 505 aaKnown RBP15.77■□□□□ 0.11
SRRM1-201ENST00000323848 ITPK1Q13572 414 aa15.77■□□□□ 0.11
SRRM1-201ENST00000323848 CEP57L1Q8IYX8 460 aa15.77■□□□□ 0.11
SRRM1-201ENST00000323848 UFL1O94874 794 aa15.77■□□□□ 0.11
SRRM1-201ENST00000323848 PDE4CQ08493 712 aa15.77■□□□□ 0.11
SRRM1-201ENST00000323848 PALLDQ8WX93 1383 aa15.76■□□□□ 0.11
SRRM1-201ENST00000323848 LMOD1P29536 600 aaPredicted RBP15.76■□□□□ 0.11
SRRM1-201ENST00000323848 IFNL3Q8IZI9 196 aa15.76■□□□□ 0.11
SRRM1-201ENST00000323848 LCORLQ8N3X6 602 aa15.76■□□□□ 0.11
SRRM1-201ENST00000323848 JMYQ8N9B5 988 aa15.76■□□□□ 0.11
SRRM1-201ENST00000323848 CNNM3Q8NE01 707 aa15.76■□□□□ 0.11
SRRM1-201ENST00000323848 C16orf45Q96MC5 204 aaPredicted RBP15.76■□□□□ 0.11
SRRM1-201ENST00000323848 ISCA1Q9BUE6 129 aa15.76■□□□□ 0.11
SRRM1-201ENST00000323848 CFAP100Q494V2 611 aa15.76■□□□□ 0.11
SRRM1-201ENST00000323848 PARP10Q53GL7 1025 aa15.76■□□□□ 0.11
SRRM1-201ENST00000323848 TTC14Q96N46 770 aa15.76■□□□□ 0.11
SRRM1-201ENST00000323848 NAT10Q9H0A0 1025 aaKnown RBP15.76■□□□□ 0.11
SRRM1-201ENST00000323848 SALL3Q9BXA9 1300 aa15.76■□□□□ 0.11
SRRM1-201ENST00000323848 BAZ2BQ9UIF8 2168 aaKnown RBP15.76■□□□□ 0.11
SRRM1-201ENST00000323848 CCDC186Q7Z3E2 898 aa15.76■□□□□ 0.11
SRRM1-201ENST00000323848 MAPKAPK5Q8IW41 473 aa15.76■□□□□ 0.11
SRRM1-201ENST00000323848 CPLX3Q8WVH0 158 aa15.76■□□□□ 0.11
SRRM1-201ENST00000323848 ESR2Q92731 530 aa15.76■□□□□ 0.11
SRRM1-201ENST00000323848 ZHX3Q9H4I2 956 aa15.76■□□□□ 0.11
SRRM1-201ENST00000323848 V9GY48 417 aaPredicted RBP15.76■□□□□ 0.11
SRRM1-201ENST00000323848 SOS2Q07890 1332 aaPredicted RBP15.76■□□□□ 0.11
SRRM1-201ENST00000323848 SPTLC2O15270 562 aa15.75■□□□□ 0.11
SRRM1-201ENST00000323848 ERBB4Q15303 1308 aa15.75■□□□□ 0.11
SRRM1-201ENST00000323848 RNF41Q9H4P4 317 aaPredicted RBP15.75■□□□□ 0.11
SRRM1-201ENST00000323848 CABP5Q9NP86 173 aa15.75■□□□□ 0.11
SRRM1-201ENST00000323848 PEAK1Q9H792 1746 aa15.75■□□□□ 0.11
SRRM1-201ENST00000323848 AOPEPQ8N6M6 819 aa15.75■□□□□ 0.11
SRRM1-201ENST00000323848 DSCC1Q9BVC3 393 aa15.75■□□□□ 0.11
SRRM1-201ENST00000323848 ZSCAN16Q9H4T2 348 aaPredicted RBP15.75■□□□□ 0.11
SRRM1-201ENST00000323848 CLIP2Q9UDT6 1046 aa15.75■□□□□ 0.11
SRRM1-201ENST00000323848 SLC4A9Q96Q91 983 aa15.74■□□□□ 0.11
SRRM1-201ENST00000323848 NCAPD2Q15021 1401 aa15.74■□□□□ 0.11
SRRM1-201ENST00000323848 DIXDC1Q155Q3 683 aa15.74■□□□□ 0.11
SRRM1-201ENST00000323848 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.74■□□□□ 0.11
SRRM1-201ENST00000323848 CRNKL1Q9BZJ0 848 aaKnown RBP15.74■□□□□ 0.11
SRRM1-201ENST00000323848 DLG5Q8TDM6 1919 aa15.74■□□□□ 0.11
SRRM1-201ENST00000323848 RABL6Q3YEC7 729 aaPredicted RBP15.74■□□□□ 0.11
SRRM1-201ENST00000323848 TBC1D9BQ66K14 1250 aa15.74■□□□□ 0.11
SRRM1-201ENST00000323848 DDX19AQ9NUU7 478 aaKnown RBP15.74■□□□□ 0.11
SRRM1-201ENST00000323848 VPS54Q9P1Q0 977 aa15.73■□□□□ 0.11
SRRM1-201ENST00000323848 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.73■□□□□ 0.11
SRRM1-201ENST00000323848 SYKP43405 635 aa15.73■□□□□ 0.11
SRRM1-201ENST00000323848 TSPY3P0CV98 308 aa15.73■□□□□ 0.11
SRRM1-201ENST00000323848 TSPY8P0CW00 308 aa15.73■□□□□ 0.11
SRRM1-201ENST00000323848 NOC3LQ8WTT2 800 aaKnown RBP15.73■□□□□ 0.11
SRRM1-201ENST00000323848 LDHBP07195 334 aaKnown RBP15.72■□□□□ 0.11
SRRM1-201ENST00000323848 MAPK8IP2Q13387 824 aaPredicted RBP15.72■□□□□ 0.11
SRRM1-201ENST00000323848 CRACR2BQ8N4Y2 399 aaPredicted RBP15.72■□□□□ 0.11
SRRM1-201ENST00000323848 TGFBRAP1Q8WUH2 860 aa15.72■□□□□ 0.11
SRRM1-201ENST00000323848 CLIC6Q96NY7 704 aa15.72■□□□□ 0.11
SRRM1-201ENST00000323848 PTGS1P23219 599 aa15.72■□□□□ 0.11
SRRM1-201ENST00000323848 STX17P56962 302 aa15.72■□□□□ 0.11
SRRM1-201ENST00000323848 KRT40Q6A162 431 aa15.72■□□□□ 0.11
SRRM1-201ENST00000323848 NSUN7Q8NE18 718 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms