RNA–Protein interactions for RNA: ENST00000323829.9

SH3TC2-201, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 7,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-201ENST00000323829 CETN3O15182 167 aa9.93□□□□□ -0.82
SH3TC2-201ENST00000323829 HLA-DOAP06340 250 aa9.93□□□□□ -0.82
SH3TC2-201ENST00000323829 TSR2Q969E8 191 aaKnown RBP9.93□□□□□ -0.82
SH3TC2-201ENST00000323829 SYTL2Q9HCH5 934 aa9.93□□□□□ -0.82
SH3TC2-201ENST00000323829 DNMBPQ6XZF7 1577 aa9.93□□□□□ -0.82
SH3TC2-201ENST00000323829 SUPT6HQ7KZ85 1726 aaKnown RBP9.93□□□□□ -0.82
SH3TC2-201ENST00000323829 BAG6P46379 1132 aa9.93□□□□□ -0.82
SH3TC2-201ENST00000323829 SSRP1Q08945 709 aaKnown RBP9.93□□□□□ -0.82
SH3TC2-201ENST00000323829 CASC4Q6P4E1 433 aa9.93□□□□□ -0.82
SH3TC2-201ENST00000323829 FAM200AQ8TCP9 573 aa9.93□□□□□ -0.82
SH3TC2-201ENST00000323829 UBLCP1Q8WVY7 318 aaPredicted RBP9.93□□□□□ -0.82
SH3TC2-201ENST00000323829 IFT81Q8WYA0 676 aa9.93□□□□□ -0.82
SH3TC2-201ENST00000323829 BMP2KLQ5H9B9 411 aa9.93□□□□□ -0.82
SH3TC2-201ENST00000323829 NXNQ6DKJ4 435 aa9.93□□□□□ -0.82
SH3TC2-201ENST00000323829 UBE3BQ7Z3V4 1068 aa9.93□□□□□ -0.82
SH3TC2-201ENST00000323829 CAPZA3Q96KX2 299 aa9.93□□□□□ -0.82
SH3TC2-201ENST00000323829 USH1CQ9Y6N9 552 aa9.93□□□□□ -0.82
SH3TC2-201ENST00000323829 CNGA1P29973 690 aa9.92□□□□□ -0.82
SH3TC2-201ENST00000323829 BRD3Q15059 726 aa9.92□□□□□ -0.82
SH3TC2-201ENST00000323829 TMCO5AQ8N6Q1 288 aa9.92□□□□□ -0.82
SH3TC2-201ENST00000323829 CTCFLQ8NI51 663 aaPredicted RBP9.92□□□□□ -0.82
SH3TC2-201ENST00000323829 ATP6V1E2Q96A05 226 aa9.92□□□□□ -0.82
SH3TC2-201ENST00000323829 SLC8A3P57103 927 aa9.92□□□□□ -0.82
SH3TC2-201ENST00000323829 RNF168Q8IYW5 571 aaPredicted RBP9.92□□□□□ -0.82
SH3TC2-201ENST00000323829 CCDC12Q8WUD4 166 aaPredicted RBP9.92□□□□□ -0.82
SH3TC2-201ENST00000323829 GOLGA1Q92805 767 aa9.92□□□□□ -0.82
SH3TC2-201ENST00000323829 CALM1P0DP23 149 aa9.92□□□□□ -0.82
SH3TC2-201ENST00000323829 CALM2P0DP24 149 aa9.92□□□□□ -0.82
SH3TC2-201ENST00000323829 CALM3P0DP25 149 aa9.92□□□□□ -0.82
SH3TC2-201ENST00000323829 GBP1P32455 592 aa9.92□□□□□ -0.82
SH3TC2-201ENST00000323829 NUB1Q9Y5A7 615 aa9.92□□□□□ -0.82
SH3TC2-201ENST00000323829 F8W031 263 aaPredicted RBP9.92□□□□□ -0.82
SH3TC2-201ENST00000323829 MCM7P33993 719 aa9.92□□□□□ -0.82
SH3TC2-201ENST00000323829 AMPD3Q01432 767 aa9.92□□□□□ -0.82
SH3TC2-201ENST00000323829 VEZTQ9HBM0 779 aa9.92□□□□□ -0.82
SH3TC2-201ENST00000323829 SERPINI2O75830 405 aa9.92□□□□□ -0.82
SH3TC2-201ENST00000323829 KIF22Q14807 665 aa9.92□□□□□ -0.82
SH3TC2-201ENST00000323829 HSP90AA4PQ58FG1 418 aa9.92□□□□□ -0.82
SH3TC2-201ENST00000323829 NUDCD3Q8IVD9 361 aa9.92□□□□□ -0.82
SH3TC2-201ENST00000323829 KRT222Q8N1A0 295 aa9.92□□□□□ -0.82
SH3TC2-201ENST00000323829 NAP1L4Q99733 375 aaKnown RBP9.92□□□□□ -0.82
SH3TC2-201ENST00000323829 RTCBQ9Y3I0 505 aaKnown RBP9.92□□□□□ -0.82
SH3TC2-201ENST00000323829 ADCY5O95622 1261 aa9.92□□□□□ -0.82
SH3TC2-201ENST00000323829 ATP6V0A1Q93050 837 aa9.92□□□□□ -0.82
SH3TC2-201ENST00000323829 CTNNA3Q9UI47 895 aa9.92□□□□□ -0.82
SH3TC2-201ENST00000323829 MTUS1Q9ULD2 1270 aa9.92□□□□□ -0.82
SH3TC2-201ENST00000323829 LAMC3Q9Y6N6 1575 aa9.92□□□□□ -0.82
SH3TC2-201ENST00000323829 BUB1BO60566 1050 aaPredicted RBP9.91□□□□□ -0.82
SH3TC2-201ENST00000323829 APOEP02649 317 aa9.91□□□□□ -0.82
SH3TC2-201ENST00000323829 RAB3GAP1Q15042 981 aa9.91□□□□□ -0.82
SH3TC2-201ENST00000323829 SMC5Q8IY18 1101 aa9.91□□□□□ -0.82
SH3TC2-201ENST00000323829 TCP11L1Q9NUJ3 509 aa9.91□□□□□ -0.82
SH3TC2-201ENST00000323829 GINS2Q9Y248 185 aa9.91□□□□□ -0.82
SH3TC2-201ENST00000323829 ATP6V0A2Q9Y487 856 aa9.91□□□□□ -0.82
SH3TC2-201ENST00000323829 SPDYE1Q8NFV5 336 aaPredicted RBP9.91□□□□□ -0.82
SH3TC2-201ENST00000323829 SMARCC2Q8TAQ2 1214 aa9.91□□□□□ -0.82
SH3TC2-201ENST00000323829 DDX41Q9UJV9 622 aaKnown RBP9.91□□□□□ -0.82
SH3TC2-201ENST00000323829 PAXBP1Q9Y5B6 917 aa9.91□□□□□ -0.82
SH3TC2-201ENST00000323829 CTAGE5O15320 804 aa9.91□□□□□ -0.82
SH3TC2-201ENST00000323829 KRT3P12035 628 aa9.91□□□□□ -0.82
SH3TC2-201ENST00000323829 HIF1AQ16665 826 aa9.91□□□□□ -0.82
SH3TC2-201ENST00000323829 FERMT3Q86UX7 667 aa9.91□□□□□ -0.82
SH3TC2-201ENST00000323829 NAPBQ9H115 298 aa9.91□□□□□ -0.82
SH3TC2-201ENST00000323829 METTL14Q9HCE5 456 aaKnown RBP9.91□□□□□ -0.82
SH3TC2-201ENST00000323829 SAMD15Q9P1V8 674 aa9.91□□□□□ -0.82
SH3TC2-201ENST00000323829 WASLO00401 505 aaPredicted RBP9.91□□□□□ -0.82
SH3TC2-201ENST00000323829 MAP3K12Q12852 859 aa9.91□□□□□ -0.82
SH3TC2-201ENST00000323829 NME9Q86XW9 330 aa9.91□□□□□ -0.82
SH3TC2-201ENST00000323829 PLB1Q6P1J6 1458 aa9.91□□□□□ -0.82
SH3TC2-201ENST00000323829 KIAA0586Q9BVV6 1533 aa9.91□□□□□ -0.82
SH3TC2-201ENST00000323829 TMEM57Q8N5G2 664 aa9.91□□□□□ -0.82
SH3TC2-201ENST00000323829 NSMCE1Q8WV22 266 aa9.91□□□□□ -0.82
SH3TC2-201ENST00000323829 SLC12A7Q9Y666 1083 aa9.91□□□□□ -0.82
SH3TC2-201ENST00000323829 PPP2R5AQ15172 486 aa9.9□□□□□ -0.82
SH3TC2-201ENST00000323829 MUM1L1Q5H9M0 696 aa9.9□□□□□ -0.82
SH3TC2-201ENST00000323829 NEK1Q96PY6 1258 aa9.9□□□□□ -0.82
SH3TC2-201ENST00000323829 ZBBXA8MT70 800 aa9.9□□□□□ -0.82
SH3TC2-201ENST00000323829 POTEB2H3BUK9 544 aa9.9□□□□□ -0.82
SH3TC2-201ENST00000323829 ZNF569Q5MCW4 686 aa9.9□□□□□ -0.82
SH3TC2-201ENST00000323829 TMC2Q8TDI7 906 aa9.9□□□□□ -0.82
SH3TC2-201ENST00000323829 PTPN23Q9H3S7 1636 aa9.9□□□□□ -0.82
SH3TC2-201ENST00000323829 LDHCP07864 332 aa9.9□□□□□ -0.82
SH3TC2-201ENST00000323829 TAF7Q15545 349 aaPredicted RBP9.9□□□□□ -0.82
SH3TC2-201ENST00000323829 NBPF11Q86T75 865 aa9.9□□□□□ -0.82
SH3TC2-201ENST00000323829 BRD2P25440 801 aaKnown RBP9.9□□□□□ -0.82
SH3TC2-201ENST00000323829 SPATS2LQ9NUQ6 558 aaKnown RBP9.9□□□□□ -0.82
SH3TC2-201ENST00000323829 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.9□□□□□ -0.82
SH3TC2-201ENST00000323829 PLEKHH1Q9ULM0 1364 aa9.9□□□□□ -0.82
SH3TC2-201ENST00000323829 FAM170AA1A519 330 aa9.9□□□□□ -0.83
SH3TC2-201ENST00000323829 OPHN1O60890 802 aa9.9□□□□□ -0.83
SH3TC2-201ENST00000323829 PRKG1Q13976 671 aa9.9□□□□□ -0.83
SH3TC2-201ENST00000323829 KSR1Q8IVT5 923 aa9.9□□□□□ -0.83
SH3TC2-201ENST00000323829 CTAGE1Q96RT6 745 aa9.9□□□□□ -0.83
SH3TC2-201ENST00000323829 VPS18Q9P253 973 aa9.9□□□□□ -0.83
SH3TC2-201ENST00000323829 FBXO2Q9UK22 296 aaPredicted RBP9.9□□□□□ -0.83
SH3TC2-201ENST00000323829 FAM95CA0A1B0GW59 222 aa9.9□□□□□ -0.83
SH3TC2-201ENST00000323829 TRIM47Q96LD4 638 aa9.9□□□□□ -0.83
SH3TC2-201ENST00000323829 HMGB1P1B2RPK0 211 aaPredicted RBP9.89□□□□□ -0.83
SH3TC2-201ENST00000323829 NEMFO60524 1076 aa9.89□□□□□ -0.83
SH3TC2-201ENST00000323829 BAG3O95817 575 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms