RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 CROCCP2Q86T23 111 aa10.91□□□□□ -0.66
COL12A1-201ENST00000322507 IFIT3O14879 490 aaKnown RBP10.91□□□□□ -0.66
COL12A1-201ENST00000322507 CXorf38Q8TB03 319 aa10.91□□□□□ -0.66
COL12A1-201ENST00000322507 CDK13Q14004 1512 aaKnown RBP10.9□□□□□ -0.66
COL12A1-201ENST00000322507 FYB2Q5VWT5 728 aa10.9□□□□□ -0.66
COL12A1-201ENST00000322507 PPP1R42Q7Z4L9 355 aa10.9□□□□□ -0.66
COL12A1-201ENST00000322507 HELBQ8NG08 1087 aaPredicted RBP10.9□□□□□ -0.66
COL12A1-201ENST00000322507 PSMA7O14818 248 aa10.9□□□□□ -0.66
COL12A1-201ENST00000322507 NEK1Q96PY6 1258 aa10.9□□□□□ -0.66
COL12A1-201ENST00000322507 CCDC159P0C7I6 412 aa10.9□□□□□ -0.66
COL12A1-201ENST00000322507 RTL9Q8NET4 1388 aa10.9□□□□□ -0.66
COL12A1-201ENST00000322507 KRT86O43790 486 aa10.9□□□□□ -0.66
COL12A1-201ENST00000322507 PSMA4P25789 261 aaKnown RBP10.9□□□□□ -0.66
COL12A1-201ENST00000322507 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.9□□□□□ -0.66
COL12A1-201ENST00000322507 RAB11FIP4Q86YS3 637 aa10.9□□□□□ -0.66
COL12A1-201ENST00000322507 FAM200AQ8TCP9 573 aa10.9□□□□□ -0.66
COL12A1-201ENST00000322507 NEK2P51955 445 aa10.9□□□□□ -0.67
COL12A1-201ENST00000322507 GRAMD4Q6IC98 578 aa10.9□□□□□ -0.67
COL12A1-201ENST00000322507 METAP2P50579 478 aaKnown RBP eCLIP10.9□□□□□ -0.67
COL12A1-201ENST00000322507 CTTNBP2NLQ9P2B4 639 aa10.9□□□□□ -0.67
COL12A1-201ENST00000322507 TTC41PQ6P2S7 1318 aa10.9□□□□□ -0.67
COL12A1-201ENST00000322507 GABPB2Q8TAK5 448 aaPredicted RBP10.89□□□□□ -0.67
COL12A1-201ENST00000322507 SSH1Q8WYL5 1049 aa10.89□□□□□ -0.67
COL12A1-201ENST00000322507 UTP14AQ9BVJ6 771 aaKnown RBP10.89□□□□□ -0.67
COL12A1-201ENST00000322507 LONP1P36776 959 aaKnown RBP10.89□□□□□ -0.67
COL12A1-201ENST00000322507 XPCQ01831 940 aaPredicted RBP10.89□□□□□ -0.67
COL12A1-201ENST00000322507 TMED1Q13445 227 aa10.89□□□□□ -0.67
COL12A1-201ENST00000322507 MIS18AQ9NYP9 233 aa10.89□□□□□ -0.67
COL12A1-201ENST00000322507 MYO1BO43795 1136 aa10.89□□□□□ -0.67
COL12A1-201ENST00000322507 PEX19P40855 299 aa10.89□□□□□ -0.67
COL12A1-201ENST00000322507 KAT14Q9H8E8 782 aa10.89□□□□□ -0.67
COL12A1-201ENST00000322507 VPS18Q9P253 973 aa10.89□□□□□ -0.67
COL12A1-201ENST00000322507 EXOC6BQ9Y2D4 811 aa10.89□□□□□ -0.67
COL12A1-201ENST00000322507 PLCG2P16885 1265 aa10.89□□□□□ -0.67
COL12A1-201ENST00000322507 CCDC63Q8NA47 563 aa10.89□□□□□ -0.67
COL12A1-201ENST00000322507 ESR2Q92731 530 aa10.89□□□□□ -0.67
COL12A1-201ENST00000322507 CRNKL1Q9BZJ0 848 aaKnown RBP10.89□□□□□ -0.67
COL12A1-201ENST00000322507 TEX14Q8IWB6 1497 aa10.89□□□□□ -0.67
COL12A1-201ENST00000322507 GOLGA8AA7E2F4 631 aa10.89□□□□□ -0.67
COL12A1-201ENST00000322507 SNX21Q969T3 373 aa10.89□□□□□ -0.67
COL12A1-201ENST00000322507 FAM210AQ96ND0 272 aa10.89□□□□□ -0.67
COL12A1-201ENST00000322507 PALM3A6NDB9 673 aaPredicted RBP10.89□□□□□ -0.67
COL12A1-201ENST00000322507 SNCBQ16143 134 aa10.89□□□□□ -0.67
COL12A1-201ENST00000322507 LRSAM1Q6UWE0 723 aa10.89□□□□□ -0.67
COL12A1-201ENST00000322507 HAUS1Q96CS2 278 aa10.89□□□□□ -0.67
COL12A1-201ENST00000322507 IQCDQ96DY2 449 aa10.89□□□□□ -0.67
COL12A1-201ENST00000322507 MPP4Q96JB8 637 aa10.89□□□□□ -0.67
COL12A1-201ENST00000322507 IRAK4Q9NWZ3 460 aa10.89□□□□□ -0.67
COL12A1-201ENST00000322507 TNPO1Q92973 898 aaKnown RBP10.89□□□□□ -0.67
COL12A1-201ENST00000322507 TBC1D32Q96NH3 1257 aa10.89□□□□□ -0.67
COL12A1-201ENST00000322507 GLT8D2Q9H1C3 349 aa10.89□□□□□ -0.67
COL12A1-201ENST00000322507 BIRC2Q13490 618 aa10.89□□□□□ -0.67
COL12A1-201ENST00000322507 PPP1R9AQ9ULJ8 1098 aa10.89□□□□□ -0.67
COL12A1-201ENST00000322507 ADCY5O95622 1261 aa10.89□□□□□ -0.67
COL12A1-201ENST00000322507 SYKP43405 635 aa10.89□□□□□ -0.67
COL12A1-201ENST00000322507 ENAHQ8N8S7 591 aaPredicted RBP10.89□□□□□ -0.67
COL12A1-201ENST00000322507 UTP6Q9NYH9 597 aaKnown RBP10.89□□□□□ -0.67
COL12A1-201ENST00000322507 GLE1Q53GS7 698 aaKnown RBP10.88□□□□□ -0.67
COL12A1-201ENST00000322507 SYCP3Q8IZU3 236 aa10.88□□□□□ -0.67
COL12A1-201ENST00000322507 MCUR1Q96AQ8 359 aa10.88□□□□□ -0.67
COL12A1-201ENST00000322507 IMPG2Q9BZV3 1241 aa10.88□□□□□ -0.67
COL12A1-201ENST00000322507 SERPINA10Q9UK55 444 aa10.88□□□□□ -0.67
COL12A1-201ENST00000322507 CFAP74Q9C0B2 1584 aa10.88□□□□□ -0.67
COL12A1-201ENST00000322507 ARIH1Q9Y4X5 557 aaPredicted RBP10.88□□□□□ -0.67
COL12A1-201ENST00000322507 ATP2C2O75185 946 aa10.88□□□□□ -0.67
COL12A1-201ENST00000322507 INTS4Q96HW7 963 aaKnown RBP10.88□□□□□ -0.67
COL12A1-201ENST00000322507 TMEM232C9JQI7 657 aa10.88□□□□□ -0.67
COL12A1-201ENST00000322507 TMEM67Q5HYA8 995 aa10.88□□□□□ -0.67
COL12A1-201ENST00000322507 CABP5Q9NP86 173 aa10.88□□□□□ -0.67
COL12A1-201ENST00000322507 MINDY4BA8MYZ0 360 aa10.88□□□□□ -0.67
COL12A1-201ENST00000322507 DDX54Q8TDD1 881 aaKnown RBP10.88□□□□□ -0.67
COL12A1-201ENST00000322507 GRIN2AQ12879 1464 aa10.88□□□□□ -0.67
COL12A1-201ENST00000322507 CTAGE8P0CG41 777 aa10.88□□□□□ -0.67
COL12A1-201ENST00000322507 CCDC96Q2M329 555 aa10.88□□□□□ -0.67
COL12A1-201ENST00000322507 CTAGE4Q8IX94 777 aa10.88□□□□□ -0.67
COL12A1-201ENST00000322507 VAV2P52735 878 aa10.87□□□□□ -0.67
COL12A1-201ENST00000322507 DMTNQ08495 405 aa10.87□□□□□ -0.67
COL12A1-201ENST00000322507 GKAP1Q5VSY0 366 aaPredicted RBP10.87□□□□□ -0.67
COL12A1-201ENST00000322507 PLXNC1O60486 1568 aa10.87□□□□□ -0.67
COL12A1-201ENST00000322507 RANBP6O60518 1105 aaKnown RBP10.87□□□□□ -0.67
COL12A1-201ENST00000322507 TRIM14Q14142 442 aa10.87□□□□□ -0.67
COL12A1-201ENST00000322507 DMRT2Q9Y5R5 561 aa10.87□□□□□ -0.67
COL12A1-201ENST00000322507 DEUP1Q05D60 604 aa10.87□□□□□ -0.67
COL12A1-201ENST00000322507 TTC22Q5TAA0 569 aa10.87□□□□□ -0.67
COL12A1-201ENST00000322507 AKR1B10O60218 316 aa10.87□□□□□ -0.67
COL12A1-201ENST00000322507 TMC6Q7Z403 805 aa10.87□□□□□ -0.67
COL12A1-201ENST00000322507 HAUS2Q9NVX0 235 aa10.87□□□□□ -0.67
COL12A1-201ENST00000322507 CD109Q6YHK3 1445 aa10.87□□□□□ -0.67
COL12A1-201ENST00000322507 NMIQ13287 307 aaPredicted RBP10.87□□□□□ -0.67
COL12A1-201ENST00000322507 FNBP4Q8N3X1 1017 aaPredicted RBP10.87□□□□□ -0.67
COL12A1-201ENST00000322507 NRBF2Q96F24 287 aa10.87□□□□□ -0.67
COL12A1-201ENST00000322507 RAD50Q92878 1312 aa10.87□□□□□ -0.67
COL12A1-201ENST00000322507 NCBP1Q09161 790 aaKnown RBP10.87□□□□□ -0.67
COL12A1-201ENST00000322507 BRAPQ7Z569 592 aa10.87□□□□□ -0.67
COL12A1-201ENST00000322507 IL1RAPL2Q9NP60 686 aa10.87□□□□□ -0.67
COL12A1-201ENST00000322507 KRT13P13646 458 aa10.87□□□□□ -0.67
COL12A1-201ENST00000322507 ZSCAN22P10073 491 aaPredicted RBP10.87□□□□□ -0.67
COL12A1-201ENST00000322507 CSRNP2Q9H175 543 aa10.86□□□□□ -0.67
COL12A1-201ENST00000322507 COMMD10Q9Y6G5 202 aa10.86□□□□□ -0.67
COL12A1-201ENST00000322507 ABCC5O15440 1437 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms