RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 RBM28Q9NW13 759 aaKnown RBP18.94■□□□□ 0.62
SMCHD1-201ENST00000320876 HS2ST1Q7LGA3 356 aa18.94■□□□□ 0.62
SMCHD1-201ENST00000320876 TRMT1LQ7Z2T5 733 aaKnown RBP18.94■□□□□ 0.62
SMCHD1-201ENST00000320876 ARHGAP45Q92619 1136 aa18.94■□□□□ 0.62
SMCHD1-201ENST00000320876 I3L4J1 428 aa18.94■□□□□ 0.62
SMCHD1-201ENST00000320876 FAM160A1Q05DH4 1040 aa18.94■□□□□ 0.62
SMCHD1-201ENST00000320876 RAB11FIP4Q86YS3 637 aa18.94■□□□□ 0.62
SMCHD1-201ENST00000320876 NAIPQ13075 1403 aa18.93■□□□□ 0.62
SMCHD1-201ENST00000320876 CETN3O15182 167 aa18.93■□□□□ 0.62
SMCHD1-201ENST00000320876 SPDYE3A6NKU9 549 aa18.93■□□□□ 0.62
SMCHD1-201ENST00000320876 STMN1P16949 149 aa18.93■□□□□ 0.62
SMCHD1-201ENST00000320876 RPL13P26373 211 aaKnown RBP18.93■□□□□ 0.62
SMCHD1-201ENST00000320876 CNGA1P29973 690 aa18.93■□□□□ 0.62
SMCHD1-201ENST00000320876 PPP1R2P41236 205 aa18.93■□□□□ 0.62
SMCHD1-201ENST00000320876 PPFIA1Q13136 1202 aa18.93■□□□□ 0.62
SMCHD1-201ENST00000320876 NCBP1Q09161 790 aaKnown RBP18.93■□□□□ 0.62
SMCHD1-201ENST00000320876 RAB3IPQ96QF0 476 aaPredicted RBP18.93■□□□□ 0.62
SMCHD1-201ENST00000320876 WHAMMP3Q1A5X7 153 aa18.92■□□□□ 0.62
SMCHD1-201ENST00000320876 SMC5Q8IY18 1101 aa18.92■□□□□ 0.62
SMCHD1-201ENST00000320876 GABPB2Q8TAK5 448 aaPredicted RBP18.92■□□□□ 0.62
SMCHD1-201ENST00000320876 RBM8AQ9Y5S9 174 aaKnown RBP18.92■□□□□ 0.62
SMCHD1-201ENST00000320876 CDK13Q14004 1512 aaKnown RBP18.92■□□□□ 0.62
SMCHD1-201ENST00000320876 ZNF131P52739 623 aa18.92■□□□□ 0.62
SMCHD1-201ENST00000320876 AGTPBP1Q9UPW5 1226 aa18.92■□□□□ 0.62
SMCHD1-201ENST00000320876 IGHDP01880 384 aa18.92■□□□□ 0.62
SMCHD1-201ENST00000320876 GNAT2P19087 354 aa18.92■□□□□ 0.62
SMCHD1-201ENST00000320876 IMPACTQ9P2X3 320 aa18.92■□□□□ 0.62
SMCHD1-201ENST00000320876 RFC1P35251 1148 aaPredicted RBP18.92■□□□□ 0.62
SMCHD1-201ENST00000320876 SATB1Q01826 763 aa18.92■□□□□ 0.62
SMCHD1-201ENST00000320876 TTLL12Q14166 644 aaPredicted RBP18.92■□□□□ 0.62
SMCHD1-201ENST00000320876 PFDN4Q9NQP4 134 aa18.92■□□□□ 0.62
SMCHD1-201ENST00000320876 AQRO60306 1485 aaKnown RBP eCLIP18.92■□□□□ 0.621e-6■■■■■ 27
SMCHD1-201ENST00000320876 MAP7Q14244 749 aa18.92■□□□□ 0.62
SMCHD1-201ENST00000320876 UAP1Q16222 522 aaPredicted RBP18.92■□□□□ 0.62
SMCHD1-201ENST00000320876 TEX13AQ9BXU3 409 aaPredicted RBP18.92■□□□□ 0.62
SMCHD1-201ENST00000320876 PRG4Q92954 1404 aaPredicted RBP18.92■□□□□ 0.62
SMCHD1-201ENST00000320876 ERCC5P28715 1186 aaPredicted RBP18.91■□□□□ 0.62
SMCHD1-201ENST00000320876 E7EVH7 732 aa18.91■□□□□ 0.62
SMCHD1-201ENST00000320876 TTC41PQ6P2S7 1318 aa18.91■□□□□ 0.62
SMCHD1-201ENST00000320876 LDHAL6AQ6ZMR3 332 aa18.91■□□□□ 0.62
SMCHD1-201ENST00000320876 ZNF526Q8TF50 670 aaPredicted RBP18.91■□□□□ 0.62
SMCHD1-201ENST00000320876 MYL5Q02045 173 aa18.91■□□□□ 0.62
SMCHD1-201ENST00000320876 IQUBQ8NA54 791 aa18.91■□□□□ 0.62
SMCHD1-201ENST00000320876 MAP2K2P36507 400 aa18.91■□□□□ 0.62
SMCHD1-201ENST00000320876 ITIH3Q06033 890 aa18.91■□□□□ 0.62
SMCHD1-201ENST00000320876 ZNF365Q70YC5 407 aa18.91■□□□□ 0.62
SMCHD1-201ENST00000320876 MYRIPQ8NFW9 859 aa18.91■□□□□ 0.62
SMCHD1-201ENST00000320876 PPFIA3O75145 1194 aa18.9■□□□□ 0.62
SMCHD1-201ENST00000320876 PDE1AP54750 535 aa18.9■□□□□ 0.62
SMCHD1-201ENST00000320876 IRX4P78413 519 aa18.9■□□□□ 0.62
SMCHD1-201ENST00000320876 RRP36Q96EU6 259 aaKnown RBP18.9■□□□□ 0.62
SMCHD1-201ENST00000320876 TACC3Q9Y6A5 838 aa18.9■□□□□ 0.62
SMCHD1-201ENST00000320876 NOX5Q96PH1 765 aa18.9■□□□□ 0.62
SMCHD1-201ENST00000320876 DTHD1Q6ZMT9 781 aa18.9■□□□□ 0.62
SMCHD1-201ENST00000320876 EPB41P11171 864 aaKnown RBP18.9■□□□□ 0.62
SMCHD1-201ENST00000320876 GNA11P29992 359 aa18.9■□□□□ 0.62
SMCHD1-201ENST00000320876 MTMR3Q13615 1198 aa18.9■□□□□ 0.62
SMCHD1-201ENST00000320876 MPRIPQ6WCQ1 1025 aa18.9■□□□□ 0.62
SMCHD1-201ENST00000320876 MBIPQ9NS73 344 aa18.9■□□□□ 0.62
SMCHD1-201ENST00000320876 TCHPQ9BT92 498 aa18.89■□□□□ 0.62
SMCHD1-201ENST00000320876 BCAP29Q9UHQ4 241 aa18.89■□□□□ 0.62
SMCHD1-201ENST00000320876 KRT79Q5XKE5 535 aa18.89■□□□□ 0.61
SMCHD1-201ENST00000320876 ANKLE2Q86XL3 938 aa18.89■□□□□ 0.61
SMCHD1-201ENST00000320876 CTNND2Q9UQB3 1225 aa18.89■□□□□ 0.61
SMCHD1-201ENST00000320876 STK10O94804 968 aaKnown RBP18.89■□□□□ 0.61
SMCHD1-201ENST00000320876 SYNRGQ9UMZ2 1314 aa18.89■□□□□ 0.61
SMCHD1-201ENST00000320876 MYCNP04198 464 aaPredicted RBP18.89■□□□□ 0.61
SMCHD1-201ENST00000320876 MCM7P33993 719 aa18.89■□□□□ 0.61
SMCHD1-201ENST00000320876 UTP14CQ5TAP6 766 aaKnown RBP18.89■□□□□ 0.61
SMCHD1-201ENST00000320876 RUFY3Q7L099 469 aa18.89■□□□□ 0.61
SMCHD1-201ENST00000320876 CCDC152Q4G0S7 254 aa18.89■□□□□ 0.61
SMCHD1-201ENST00000320876 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.89■□□□□ 0.61
SMCHD1-201ENST00000320876 CCDC65Q8IXS2 484 aa18.89■□□□□ 0.61
SMCHD1-201ENST00000320876 PPANQ9NQ55 473 aaKnown RBP18.89■□□□□ 0.61
SMCHD1-201ENST00000320876 CCT6AP40227 531 aaKnown RBP18.88■□□□□ 0.61
SMCHD1-201ENST00000320876 IGSF22Q8N9C0 903 aa18.88■□□□□ 0.61
SMCHD1-201ENST00000320876 RHPN1Q8TCX5 695 aa18.88■□□□□ 0.61
SMCHD1-201ENST00000320876 VCX3AQ9NNX9 186 aa18.88■□□□□ 0.61
SMCHD1-201ENST00000320876 AK9Q5TCS8 1911 aa18.88■□□□□ 0.61
SMCHD1-201ENST00000320876 LRRC2Q9BYS8 371 aa18.88■□□□□ 0.61
SMCHD1-201ENST00000320876 GBP5Q96PP8 586 aa18.88■□□□□ 0.61
SMCHD1-201ENST00000320876 DENND2CQ68D51 928 aa18.88■□□□□ 0.61
SMCHD1-201ENST00000320876 SLC4A8Q2Y0W8 1093 aa18.88■□□□□ 0.61
SMCHD1-201ENST00000320876 DCAF17Q5H9S7 520 aaPredicted RBP18.88■□□□□ 0.61
SMCHD1-201ENST00000320876 PPFIA2O75334 1257 aa18.88■□□□□ 0.61
SMCHD1-201ENST00000320876 ERCC3P19447 782 aa18.88■□□□□ 0.61
SMCHD1-201ENST00000320876 KDM5AP29375 1690 aaKnown RBP18.88■□□□□ 0.61
SMCHD1-201ENST00000320876 ANKRD36BQ8N2N9 1353 aa18.88■□□□□ 0.61
SMCHD1-201ENST00000320876 SRGAP1Q7Z6B7 1085 aa18.88■□□□□ 0.61
SMCHD1-201ENST00000320876 SPATS2Q86XZ4 545 aaKnown RBP18.88■□□□□ 0.61
SMCHD1-201ENST00000320876 SLC4A4Q9Y6R1 1079 aa18.88■□□□□ 0.61
SMCHD1-201ENST00000320876 RILPL1Q5EBL4 403 aa18.87■□□□□ 0.61
SMCHD1-201ENST00000320876 MAP3K21Q5TCX8 1036 aa18.87■□□□□ 0.61
SMCHD1-201ENST00000320876 CNNM4Q6P4Q7 775 aa18.87■□□□□ 0.61
SMCHD1-201ENST00000320876 TSKSQ9UJT2 592 aa18.87■□□□□ 0.61
SMCHD1-201ENST00000320876 NUTM2BA6NNL0 878 aaPredicted RBP18.87■□□□□ 0.61
SMCHD1-201ENST00000320876 NUTM2EB1AL46 878 aaPredicted RBP18.87■□□□□ 0.61
SMCHD1-201ENST00000320876 KIFC2Q96AC6 838 aa18.87■□□□□ 0.61
SMCHD1-201ENST00000320876 SMARCC2Q8TAQ2 1214 aa18.87■□□□□ 0.61
SMCHD1-201ENST00000320876 LEO1Q8WVC0 666 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms