RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 ZNF202O95125 648 aa18.82■□□□□ 0.6
CLIP4-201ENST00000320081 PHKG2P15735 406 aa18.82■□□□□ 0.6
CLIP4-201ENST00000320081 PRPF4BQ13523 1007 aaKnown RBP18.82■□□□□ 0.6
CLIP4-201ENST00000320081 CCDC191Q8NCU4 936 aa18.82■□□□□ 0.6
CLIP4-201ENST00000320081 BAG3O95817 575 aa18.81■□□□□ 0.6
CLIP4-201ENST00000320081 NOP2P46087 812 aaKnown RBP18.81■□□□□ 0.6
CLIP4-201ENST00000320081 NAPAP54920 295 aa18.81■□□□□ 0.6
CLIP4-201ENST00000320081 FAM182BQ5T319 152 aa18.81■□□□□ 0.6
CLIP4-201ENST00000320081 SDR42E1Q8WUS8 393 aa18.81■□□□□ 0.6
CLIP4-201ENST00000320081 CCDC113Q9H0I3 377 aa18.81■□□□□ 0.6
CLIP4-201ENST00000320081 AATFQ9NY61 560 aaKnown RBP eCLIP18.81■□□□□ 0.6
CLIP4-201ENST00000320081 GUCA1BQ9UMX6 200 aa18.81■□□□□ 0.6
CLIP4-201ENST00000320081 COBLO75128 1261 aa18.81■□□□□ 0.6
CLIP4-201ENST00000320081 CHGBP05060 677 aa18.81■□□□□ 0.6
CLIP4-201ENST00000320081 KRT40Q6A162 431 aa18.81■□□□□ 0.6
CLIP4-201ENST00000320081 ZNF287Q9HBT7 754 aa18.81■□□□□ 0.6
CLIP4-201ENST00000320081 SH3TC1Q8TE82 1336 aa18.81■□□□□ 0.6
CLIP4-201ENST00000320081 HOXB7P09629 217 aa18.81■□□□□ 0.6
CLIP4-201ENST00000320081 RHOXF2BP0C7M4 288 aa18.81■□□□□ 0.6
CLIP4-201ENST00000320081 HSPD1P10809 573 aaKnown RBP18.81■□□□□ 0.6
CLIP4-201ENST00000320081 RHOXF2Q9BQY4 288 aa18.81■□□□□ 0.6
CLIP4-201ENST00000320081 FSD2A1L4K1 749 aa18.8■□□□□ 0.6
CLIP4-201ENST00000320081 TMCO5BA8MYB1 307 aa18.8■□□□□ 0.6
CLIP4-201ENST00000320081 CAVIN2O95810 425 aa18.8■□□□□ 0.6
CLIP4-201ENST00000320081 TNNI2P48788 182 aa18.8■□□□□ 0.6
CLIP4-201ENST00000320081 CCDC150Q8NCX0 1101 aa18.8■□□□□ 0.6
CLIP4-201ENST00000320081 ADGBQ8N7X0 1667 aa18.8■□□□□ 0.6
CLIP4-201ENST00000320081 ARHGEF5Q12774 1597 aa18.8■□□□□ 0.6
CLIP4-201ENST00000320081 FGAP02671 866 aa18.8■□□□□ 0.6
CLIP4-201ENST00000320081 ATP5JP18859 108 aa18.8■□□□□ 0.6
CLIP4-201ENST00000320081 HLTFQ14527 1009 aaKnown RBP eCLIP18.8■□□□□ 0.6
CLIP4-201ENST00000320081 CLSTN2Q9H4D0 955 aa18.8■□□□□ 0.6
CLIP4-201ENST00000320081 CWC15Q9P013 229 aaKnown RBP18.8■□□□□ 0.6
CLIP4-201ENST00000320081 VPS54Q9P1Q0 977 aa18.8■□□□□ 0.6
CLIP4-201ENST00000320081 BCCIPQ9P287 314 aaKnown RBP eCLIP18.8■□□□□ 0.6
CLIP4-201ENST00000320081 CNNM2Q9H8M5 875 aa18.8■□□□□ 0.6
CLIP4-201ENST00000320081 SYNMO15061 1565 aa18.8■□□□□ 0.6
CLIP4-201ENST00000320081 FAM47AQ5JRC9 791 aa18.8■□□□□ 0.6
CLIP4-201ENST00000320081 TAF4BQ92750 862 aa18.8■□□□□ 0.6
CLIP4-201ENST00000320081 CLIC6Q96NY7 704 aa18.8■□□□□ 0.6
CLIP4-201ENST00000320081 LUC7LQ9NQ29 371 aaKnown RBP18.8■□□□□ 0.6
CLIP4-201ENST00000320081 HELLSQ9NRZ9 838 aa18.8■□□□□ 0.6
CLIP4-201ENST00000320081 KCNH3Q9ULD8 1083 aa18.8■□□□□ 0.6
CLIP4-201ENST00000320081 PIK3AP1Q6ZUJ8 805 aa18.79■□□□□ 0.6
CLIP4-201ENST00000320081 GNPATO15228 680 aa18.79■□□□□ 0.6
CLIP4-201ENST00000320081 SASH1O94885 1247 aa18.79■□□□□ 0.6
CLIP4-201ENST00000320081 EPHA10Q5JZY3 1008 aa18.79■□□□□ 0.6
CLIP4-201ENST00000320081 KRI1Q8N9T8 703 aaKnown RBP18.79■□□□□ 0.6
CLIP4-201ENST00000320081 PAXBP1Q9Y5B6 917 aa18.79■□□□□ 0.6
CLIP4-201ENST00000320081 ERBB4Q15303 1308 aa18.79■□□□□ 0.6
CLIP4-201ENST00000320081 ZNF75DP51815 510 aa18.79■□□□□ 0.6
CLIP4-201ENST00000320081 TMEM266Q2M3C6 531 aa18.79■□□□□ 0.6
CLIP4-201ENST00000320081 CALML4Q96GE6 196 aa18.79■□□□□ 0.6
CLIP4-201ENST00000320081 ZSWIM6Q9HCJ5 1215 aa18.79■□□□□ 0.6
CLIP4-201ENST00000320081 PCDH11XQ9BZA7 1347 aa18.79■□□□□ 0.6
CLIP4-201ENST00000320081 PCDH11YQ9BZA8 1340 aa18.79■□□□□ 0.6
CLIP4-201ENST00000320081 IGSF1Q8N6C5 1336 aa18.78■□□□□ 0.6
CLIP4-201ENST00000320081 LETM2Q2VYF4 491 aa18.78■□□□□ 0.6
CLIP4-201ENST00000320081 SLU7O95391 586 aaKnown RBP18.78■□□□□ 0.6
CLIP4-201ENST00000320081 GOLGA6L10A6NI86 522 aa18.78■□□□□ 0.6
CLIP4-201ENST00000320081 GYG1P46976 350 aa18.78■□□□□ 0.6
CLIP4-201ENST00000320081 PNOCQ13519 176 aa18.78■□□□□ 0.6
CLIP4-201ENST00000320081 SYNE4Q8N205 404 aa18.78■□□□□ 0.6
CLIP4-201ENST00000320081 ECM2O94769 699 aaPredicted RBP18.77■□□□□ 0.6
CLIP4-201ENST00000320081 BCAMP50895 628 aa18.77■□□□□ 0.6
CLIP4-201ENST00000320081 MYL5Q02045 173 aa18.77■□□□□ 0.6
CLIP4-201ENST00000320081 SCRN1Q12765 414 aa18.77■□□□□ 0.6
CLIP4-201ENST00000320081 WDR78Q5VTH9 848 aa18.77■□□□□ 0.6
CLIP4-201ENST00000320081 PYCARDQ9ULZ3 195 aa18.77■□□□□ 0.6
CLIP4-201ENST00000320081 GOLGA8FQ08AF8 430 aa18.77■□□□□ 0.6
CLIP4-201ENST00000320081 RAD51AP2Q09MP3 1159 aa18.77■□□□□ 0.6
CLIP4-201ENST00000320081 GOLGA8DPQ0D2H9 430 aa18.77■□□□□ 0.6
CLIP4-201ENST00000320081 HS1BP3Q53T59 392 aa18.77■□□□□ 0.6
CLIP4-201ENST00000320081 AIFM3Q96NN9 605 aa18.77■□□□□ 0.6
CLIP4-201ENST00000320081 TMOD2Q9NZR1 351 aa18.77■□□□□ 0.6
CLIP4-201ENST00000320081 DNAJC21Q5F1R6 531 aaKnown RBP18.77■□□□□ 0.59
CLIP4-201ENST00000320081 ZNF569Q5MCW4 686 aa18.77■□□□□ 0.59
CLIP4-201ENST00000320081 SRRTQ9BXP5 876 aaKnown RBP18.77■□□□□ 0.59
CLIP4-201ENST00000320081 GREM2Q9H772 168 aa18.77■□□□□ 0.59
CLIP4-201ENST00000320081 EXOC1Q9NV70 894 aa18.77■□□□□ 0.59
CLIP4-201ENST00000320081 NFE2L3Q9Y4A8 694 aa18.77■□□□□ 0.59
CLIP4-201ENST00000320081 ARHGEF10O15013 1369 aa18.76■□□□□ 0.59
CLIP4-201ENST00000320081 NEFHP12036 1026 aa18.76■□□□□ 0.59
CLIP4-201ENST00000320081 HINFPQ9BQA5 517 aa18.76■□□□□ 0.59
CLIP4-201ENST00000320081 SAMM50Q9Y512 469 aa18.76■□□□□ 0.59
CLIP4-201ENST00000320081 PHKA1P46020 1223 aa18.76■□□□□ 0.59
CLIP4-201ENST00000320081 ELF2Q15723 593 aa18.76■□□□□ 0.59
CLIP4-201ENST00000320081 TMTC2Q8N394 836 aa18.76■□□□□ 0.59
CLIP4-201ENST00000320081 PSMB7Q99436 277 aa18.76■□□□□ 0.59
CLIP4-201ENST00000320081 XPO4Q9C0E2 1151 aaKnown RBP18.76■□□□□ 0.59
CLIP4-201ENST00000320081 AXIN2Q9Y2T1 843 aa18.76■□□□□ 0.59
CLIP4-201ENST00000320081 FANCCQ00597 558 aa18.76■□□□□ 0.59
CLIP4-201ENST00000320081 BLZF1Q9H2G9 400 aa18.76■□□□□ 0.59
CLIP4-201ENST00000320081 BTBD18B2RXH4 712 aa18.75■□□□□ 0.59
CLIP4-201ENST00000320081 BRAPQ7Z569 592 aa18.75■□□□□ 0.59
CLIP4-201ENST00000320081 CDR1P51861 262 aa18.75■□□□□ 0.59
CLIP4-201ENST00000320081 UBXN1Q04323 297 aa18.75■□□□□ 0.59
CLIP4-201ENST00000320081 MAP4K1Q92918 833 aa18.75■□□□□ 0.59
CLIP4-201ENST00000320081 FEZ1Q99689 392 aa18.75■□□□□ 0.59
CLIP4-201ENST00000320081 RAB34Q9BZG1 259 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms