RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 SLC4A10Q6U841 1118 aa17.96■□□□□ 0.47
RPP40-201ENST00000319533 FBXO33Q7Z6M2 555 aa17.96■□□□□ 0.47
RPP40-201ENST00000319533 TEPSINQ96N21 525 aa17.96■□□□□ 0.47
RPP40-201ENST00000319533 TTF2Q9UNY4 1162 aaKnown RBP17.96■□□□□ 0.47
RPP40-201ENST00000319533 PRPF38BQ5VTL8 546 aaKnown RBP17.95■□□□□ 0.46
RPP40-201ENST00000319533 HTTP42858 3142 aa17.95■□□□□ 0.46
RPP40-201ENST00000319533 MYCNP04198 464 aaPredicted RBP17.94■□□□□ 0.46
RPP40-201ENST00000319533 DZIP1LQ8IYY4 767 aaKnown RBP17.94■□□□□ 0.46
RPP40-201ENST00000319533 TDRD3Q9H7E2 651 aaKnown RBP17.94■□□□□ 0.46
RPP40-201ENST00000319533 CRKP46108 304 aa17.93■□□□□ 0.46
RPP40-201ENST00000319533 HDLBPQ00341 1268 aaKnown RBP17.93■□□□□ 0.46
RPP40-201ENST00000319533 OTUD7BQ6GQQ9 843 aa17.93■□□□□ 0.46
RPP40-201ENST00000319533 OTOP1Q7RTM1 612 aa17.93■□□□□ 0.46
RPP40-201ENST00000319533 ANKRD44Q8N8A2 993 aa17.93■□□□□ 0.46
RPP40-201ENST00000319533 VGLL2Q8N8G2 317 aa17.93■□□□□ 0.46
RPP40-201ENST00000319533 PTPN18Q99952 460 aa17.93■□□□□ 0.46
RPP40-201ENST00000319533 BICC1Q9H694 974 aaKnown RBP17.93■□□□□ 0.46
RPP40-201ENST00000319533 OTOFQ9HC10 1997 aa17.93■□□□□ 0.46
RPP40-201ENST00000319533 CRHR2Q13324 411 aa17.92■□□□□ 0.46
RPP40-201ENST00000319533 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.92■□□□□ 0.46
RPP40-201ENST00000319533 MRPL50Q8N5N7 158 aaKnown RBP17.92■□□□□ 0.46
RPP40-201ENST00000319533 MS4A4AQ96JQ5 239 aa17.92■□□□□ 0.46
RPP40-201ENST00000319533 MRIQ9BWK5 157 aa17.92■□□□□ 0.46
RPP40-201ENST00000319533 TRIM17Q9Y577 477 aa17.92■□□□□ 0.46
RPP40-201ENST00000319533 PDE8BO95263 885 aa17.91■□□□□ 0.46
RPP40-201ENST00000319533 GRIK5Q16478 980 aa17.91■□□□□ 0.46
RPP40-201ENST00000319533 LRRC24Q50LG9 513 aa17.91■□□□□ 0.46
RPP40-201ENST00000319533 CDAN1Q8IWY9 1227 aa17.91■□□□□ 0.46
RPP40-201ENST00000319533 FAM9BQ8IZU0 186 aa17.91■□□□□ 0.46
RPP40-201ENST00000319533 TBC1D22AQ8WUA7 517 aa17.91■□□□□ 0.46
RPP40-201ENST00000319533 ERO1AQ96HE7 468 aa17.91■□□□□ 0.46
RPP40-201ENST00000319533 TNNI2P48788 182 aa17.9■□□□□ 0.46
RPP40-201ENST00000319533 INTS3Q68E01 1043 aaKnown RBP17.9■□□□□ 0.46
RPP40-201ENST00000319533 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.9■□□□□ 0.46
RPP40-201ENST00000319533 OPTNQ96CV9 577 aa17.9■□□□□ 0.46
RPP40-201ENST00000319533 TMEM39BQ9GZU3 492 aa17.9■□□□□ 0.46
RPP40-201ENST00000319533 ELP3Q9H9T3 547 aa17.9■□□□□ 0.46
RPP40-201ENST00000319533 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.9■□□□□ 0.46
RPP40-201ENST00000319533 PCDH10Q9P2E7 1040 aa17.9■□□□□ 0.46
RPP40-201ENST00000319533 PTPRCP08575 1304 aa17.9■□□□□ 0.46
RPP40-201ENST00000319533 KIF16BQ96L93 1317 aa17.9■□□□□ 0.46
RPP40-201ENST00000319533 TCP10L2B9ZVM9 353 aa17.89■□□□□ 0.45
RPP40-201ENST00000319533 MAP3K9P80192 1104 aa17.89■□□□□ 0.45
RPP40-201ENST00000319533 CAVIN4Q5BKX8 364 aa17.89■□□□□ 0.45
RPP40-201ENST00000319533 METTL24Q5JXM2 366 aa17.89■□□□□ 0.45
RPP40-201ENST00000319533 PTPN22Q9Y2R2 807 aa17.89■□□□□ 0.45
RPP40-201ENST00000319533 FGFR2P21802 821 aa17.88■□□□□ 0.45
RPP40-201ENST00000319533 SP3Q02447 781 aa17.88■□□□□ 0.45
RPP40-201ENST00000319533 VGLL4Q14135 290 aa17.88■□□□□ 0.45
RPP40-201ENST00000319533 FKBP1CQ5VVH2 108 aa17.88■□□□□ 0.45
RPP40-201ENST00000319533 VPS37DQ86XT2 251 aa17.88■□□□□ 0.45
RPP40-201ENST00000319533 CD99L2Q8TCZ2 262 aa17.88■□□□□ 0.45
RPP40-201ENST00000319533 BRI3BPQ8WY22 251 aa17.88■□□□□ 0.45
RPP40-201ENST00000319533 ZDHHC15Q96MV8 337 aa17.88■□□□□ 0.45
RPP40-201ENST00000319533 USP44Q9H0E7 712 aa17.88■□□□□ 0.45
RPP40-201ENST00000319533 SUGT1Q9Y2Z0 365 aa17.88■□□□□ 0.45
RPP40-201ENST00000319533 CAP1Q01518 475 aa17.87■□□□□ 0.45
RPP40-201ENST00000319533 FAM83AQ86UY5 434 aa17.87■□□□□ 0.45
RPP40-201ENST00000319533 TEKT1Q969V4 418 aa17.87■□□□□ 0.45
RPP40-201ENST00000319533 ARMC5Q96C12 935 aa17.87■□□□□ 0.45
RPP40-201ENST00000319533 IQSEC3Q9UPP2 1182 aaPredicted RBP17.87■□□□□ 0.45
RPP40-201ENST00000319533 BCAMP50895 628 aa17.86■□□□□ 0.45
RPP40-201ENST00000319533 GTF2A2P52657 109 aa17.86■□□□□ 0.45
RPP40-201ENST00000319533 CHAF1AQ13111 956 aaPredicted RBP17.86■□□□□ 0.45
RPP40-201ENST00000319533 EFCC1Q9HA90 598 aa17.86■□□□□ 0.45
RPP40-201ENST00000319533 CENPFP49454 3210 aa17.86■□□□□ 0.45
RPP40-201ENST00000319533 RBBP6Q7Z6E9 1792 aaKnown RBP17.86■□□□□ 0.45
RPP40-201ENST00000319533 SPDYE5A6NIY4 337 aa17.85■□□□□ 0.45
RPP40-201ENST00000319533 E9PSI1 815 aa17.85■□□□□ 0.45
RPP40-201ENST00000319533 RFX5P48382 616 aaPredicted RBP17.85■□□□□ 0.45
RPP40-201ENST00000319533 PUM3Q15397 648 aaKnown RBP17.85■□□□□ 0.45
RPP40-201ENST00000319533 APOBEC3HQ6NTF7 200 aaKnown RBP17.85■□□□□ 0.45
RPP40-201ENST00000319533 HHIPL2Q6UWX4 724 aa17.85■□□□□ 0.45
RPP40-201ENST00000319533 KLHDC4Q8TBB5 520 aa17.85■□□□□ 0.45
RPP40-201ENST00000319533 SSH1Q8WYL5 1049 aa17.85■□□□□ 0.45
RPP40-201ENST00000319533 CSADQ9Y600 493 aa17.85■□□□□ 0.45
RPP40-201ENST00000319533 RPAP1Q9BWH6 1393 aaPredicted RBP17.84■□□□□ 0.45
RPP40-201ENST00000319533 MAST3O60307 1309 aa17.84■□□□□ 0.45
RPP40-201ENST00000319533 CCL15-CCL14A0A0B4J2E2 113 aa17.84■□□□□ 0.45
RPP40-201ENST00000319533 POTEFA5A3E0 1075 aa17.84■□□□□ 0.45
RPP40-201ENST00000319533 FRAT2O75474 233 aaPredicted RBP17.84■□□□□ 0.45
RPP40-201ENST00000319533 CCL15Q16663 113 aa17.84■□□□□ 0.45
RPP40-201ENST00000319533 ZCCHC17Q9NP64 241 aaKnown RBP17.84■□□□□ 0.45
RPP40-201ENST00000319533 SNCAIPQ9Y6H5 919 aa17.84■□□□□ 0.45
RPP40-201ENST00000319533 MKI67P46013 3256 aaKnown RBP17.84■□□□□ 0.45
RPP40-201ENST00000319533 EYA2O00167 538 aa17.83■□□□□ 0.44
RPP40-201ENST00000319533 IFIT1P09914 478 aaKnown RBP17.83■□□□□ 0.44
RPP40-201ENST00000319533 CACNB3P54284 484 aa17.83■□□□□ 0.44
RPP40-201ENST00000319533 FAM43AQ8N2R8 423 aa17.83■□□□□ 0.44
RPP40-201ENST00000319533 HOOK2Q96ED9 719 aa17.83■□□□□ 0.44
RPP40-201ENST00000319533 ZFYVE28Q9HCC9 887 aa17.83■□□□□ 0.44
RPP40-201ENST00000319533 BRCA2P51587 3418 aa17.82■□□□□ 0.44
RPP40-201ENST00000319533 KIAA0100Q14667 2235 aaKnown RBP17.82■□□□□ 0.44
RPP40-201ENST00000319533 SLFN5Q08AF3 891 aa17.82■□□□□ 0.44
RPP40-201ENST00000319533 TAF1CQ15572 869 aaPredicted RBP17.82■□□□□ 0.44
RPP40-201ENST00000319533 ALDH1L2Q3SY69 923 aa17.82■□□□□ 0.44
RPP40-201ENST00000319533 ERO1BQ86YB8 467 aa17.82■□□□□ 0.44
RPP40-201ENST00000319533 LPIN2Q92539 896 aa17.82■□□□□ 0.44
RPP40-201ENST00000319533 OTUD5Q96G74 571 aa17.82■□□□□ 0.44
RPP40-201ENST00000319533 TMOD2Q9NZR1 351 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms