RNA–Protein interactions for RNA: ENST00000318220.10

NBPF3-201, Transcript of NBPF member 3, humanhuman

TSL 2

Gene NBPF3, Length 4,401 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-201ENST00000318220 CSPG5O95196 566 aa15.27■□□□□ 0.03
NBPF3-201ENST00000318220 ADRA2BP18089 450 aa15.27■□□□□ 0.03
NBPF3-201ENST00000318220 KRT26Q7Z3Y9 468 aa15.27■□□□□ 0.03
NBPF3-201ENST00000318220 LEMD3Q9Y2U8 911 aa15.27■□□□□ 0.03
NBPF3-201ENST00000318220 FLOT1O75955 427 aa15.26■□□□□ 0.03
NBPF3-201ENST00000318220 FILIP1LQ4L180 1135 aa15.26■□□□□ 0.03
NBPF3-201ENST00000318220 LIMCH1Q9UPQ0 1083 aa15.26■□□□□ 0.03
NBPF3-201ENST00000318220 ALAS1P13196 640 aa15.26■□□□□ 0.03
NBPF3-201ENST00000318220 SSFA2P28290 1259 aa15.26■□□□□ 0.03
NBPF3-201ENST00000318220 DPP9Q86TI2 863 aa15.26■□□□□ 0.03
NBPF3-201ENST00000318220 NAT10Q9H0A0 1025 aaKnown RBP15.26■□□□□ 0.03
NBPF3-201ENST00000318220 SPATA31A5Q5VU36 1347 aa15.26■□□□□ 0.03
NBPF3-201ENST00000318220 SPATA31A7Q8IWB4 1347 aa15.26■□□□□ 0.03
NBPF3-201ENST00000318220 GRAPQ13588 217 aa15.26■□□□□ 0.03
NBPF3-201ENST00000318220 GRAPLQ8TC17 118 aaPredicted RBP15.26■□□□□ 0.03
NBPF3-201ENST00000318220 ATP7BP35670 1465 aa15.26■□□□□ 0.03
NBPF3-201ENST00000318220 HMGN5P82970 282 aaKnown RBP15.25■□□□□ 0.03
NBPF3-201ENST00000318220 CLEC4GQ6UXB4 293 aa15.25■□□□□ 0.03
NBPF3-201ENST00000318220 APPBP2Q92624 585 aa15.25■□□□□ 0.03
NBPF3-201ENST00000318220 FAM212AQ96EL1 285 aa15.25■□□□□ 0.03
NBPF3-201ENST00000318220 USP17L3A6NCW0 530 aa15.25■□□□□ 0.03
NBPF3-201ENST00000318220 USP17L4A6NCW7 530 aa15.25■□□□□ 0.03
NBPF3-201ENST00000318220 SORBS3O60504 671 aa15.25■□□□□ 0.03
NBPF3-201ENST00000318220 USP17L1Q7RTZ2 530 aa15.25■□□□□ 0.03
NBPF3-201ENST00000318220 ANKRD35Q8N283 1001 aa15.25■□□□□ 0.03
NBPF3-201ENST00000318220 CCDC39Q9UFE4 941 aa15.25■□□□□ 0.03
NBPF3-201ENST00000318220 FMNL1O95466 1100 aaPredicted RBP15.25■□□□□ 0.03
NBPF3-201ENST00000318220 TRIM21P19474 475 aaKnown RBP15.25■□□□□ 0.03
NBPF3-201ENST00000318220 CERKLQ49MI3 558 aaPredicted RBP15.25■□□□□ 0.03
NBPF3-201ENST00000318220 DCTPP1Q9H773 170 aa15.25■□□□□ 0.03
NBPF3-201ENST00000318220 PODXL2Q9NZ53 605 aa15.25■□□□□ 0.03
NBPF3-201ENST00000318220 SOS2Q07890 1332 aaPredicted RBP15.25■□□□□ 0.03
NBPF3-201ENST00000318220 OVOS2A0A0G2JMS6 1433 aa15.25■□□□□ 0.03
NBPF3-201ENST00000318220 OVOS2A0A0J9YW53 1432 aa15.25■□□□□ 0.03
NBPF3-201ENST00000318220 OVOS2Q6IE36 1432 aa15.25■□□□□ 0.03
NBPF3-201ENST00000318220 PLA2R1Q13018 1463 aa15.25■□□□□ 0.03
NBPF3-201ENST00000318220 UBE4AQ14139 1066 aa15.25■□□□□ 0.03
NBPF3-201ENST00000318220 ALG1Q9BT22 464 aa15.25■□□□□ 0.03
NBPF3-201ENST00000318220 SSR1P43307 286 aaKnown RBP15.24■□□□□ 0.03
NBPF3-201ENST00000318220 CELF1Q92879 486 aaKnown RBP15.24■□□□□ 0.03
NBPF3-201ENST00000318220 AS3MTQ9HBK9 375 aa15.24■□□□□ 0.03
NBPF3-201ENST00000318220 CHMP2AO43633 222 aa15.24■□□□□ 0.03
NBPF3-201ENST00000318220 CTDSPL2Q05D32 466 aa15.24■□□□□ 0.03
NBPF3-201ENST00000318220 SKOR2Q2VWA4 1001 aaPredicted RBP15.24■□□□□ 0.03
NBPF3-201ENST00000318220 CALML4Q96GE6 196 aa15.24■□□□□ 0.03
NBPF3-201ENST00000318220 ARID3AQ99856 593 aa15.24■□□□□ 0.03
NBPF3-201ENST00000318220 SCAF8Q9UPN6 1271 aaKnown RBP15.24■□□□□ 0.03
NBPF3-201ENST00000318220 CYP19A1P11511 503 aaPredicted RBP15.24■□□□□ 0.03
NBPF3-201ENST00000318220 VSIG10Q8N0Z9 540 aa15.24■□□□□ 0.03
NBPF3-201ENST00000318220 IQCA1LA6NCM1 817 aa15.23■□□□□ 0.03
NBPF3-201ENST00000318220 ERVV-1B6SEH8 477 aa15.23■□□□□ 0.03
NBPF3-201ENST00000318220 ADORA1P30542 326 aa15.23■□□□□ 0.03
NBPF3-201ENST00000318220 AKNAD1Q5T1N1 836 aa15.23■□□□□ 0.03
NBPF3-201ENST00000318220 Q6ZUG5 572 aa15.23■□□□□ 0.03
NBPF3-201ENST00000318220 CCDC148Q8NFR7 591 aa15.23■□□□□ 0.03
NBPF3-201ENST00000318220 hCG_1642624A0A1W2PR95 340 aa15.23■□□□□ 0.03
NBPF3-201ENST00000318220 DDX39AO00148 427 aaKnown RBP15.23■□□□□ 0.03
NBPF3-201ENST00000318220 GDF11O95390 407 aa15.23■□□□□ 0.03
NBPF3-201ENST00000318220 PABPC4Q13310 644 aaKnown RBP eCLIP15.23■□□□□ 0.03
NBPF3-201ENST00000318220 NOM1Q5C9Z4 860 aaKnown RBP15.23■□□□□ 0.03
NBPF3-201ENST00000318220 TRIM5Q9C035 493 aa15.23■□□□□ 0.03
NBPF3-201ENST00000318220 COL15A1P39059 1388 aa15.23■□□□□ 0.03
NBPF3-201ENST00000318220 ZBTB7BO15156 539 aaPredicted RBP15.23■□□□□ 0.03
NBPF3-201ENST00000318220 SERPINC1P01008 464 aa15.23■□□□□ 0.03
NBPF3-201ENST00000318220 ZBTB40Q9NUA8 1239 aa15.23■□□□□ 0.03
NBPF3-201ENST00000318220 HMG20BQ9P0W2 317 aa15.23■□□□□ 0.03
NBPF3-201ENST00000318220 DTNBO60941 627 aa15.23■□□□□ 0.03
NBPF3-201ENST00000318220 DPEP1P16444 411 aa15.23■□□□□ 0.03
NBPF3-201ENST00000318220 TMC4Q7Z404 712 aa15.23■□□□□ 0.03
NBPF3-201ENST00000318220 KDM2BQ8NHM5 1336 aa15.22■□□□□ 0.03
NBPF3-201ENST00000318220 HARSP12081 509 aaKnown RBP15.22■□□□□ 0.03
NBPF3-201ENST00000318220 CALML3P27482 149 aa15.22■□□□□ 0.03
NBPF3-201ENST00000318220 TDRD3Q9H7E2 651 aaKnown RBP15.22■□□□□ 0.03
NBPF3-201ENST00000318220 MMRN2Q9H8L6 949 aa15.22■□□□□ 0.03
NBPF3-201ENST00000318220 USP8P40818 1118 aa15.22■□□□□ 0.03
NBPF3-201ENST00000318220 NCBP1Q09161 790 aaKnown RBP15.22■□□□□ 0.03
NBPF3-201ENST00000318220 BEND3Q5T5X7 828 aa15.22■□□□□ 0.03
NBPF3-201ENST00000318220 LRRC47Q8N1G4 583 aaKnown RBP15.22■□□□□ 0.03
NBPF3-201ENST00000318220 FAM227BQ96M60 508 aa15.22■□□□□ 0.03
NBPF3-201ENST00000318220 MYL10Q9BUA6 226 aa15.22■□□□□ 0.03
NBPF3-201ENST00000318220 TNMDQ9H2S6 317 aa15.22■□□□□ 0.03
NBPF3-201ENST00000318220 RTL1A6NKG5 1358 aa15.22■□□□□ 0.03
NBPF3-201ENST00000318220 PI16Q6UXB8 463 aa15.22■□□□□ 0.03
NBPF3-201ENST00000318220 ZBTB12Q9Y330 459 aaPredicted RBP15.22■□□□□ 0.03
NBPF3-201ENST00000318220 CCDC171Q6TFL3 1326 aa15.22■□□□□ 0.03
NBPF3-201ENST00000318220 NEBLO76041 1014 aa15.21■□□□□ 0.03
NBPF3-201ENST00000318220 RFX1P22670 979 aa15.21■□□□□ 0.03
NBPF3-201ENST00000318220 IREB2P48200 963 aaKnown RBP15.21■□□□□ 0.03
NBPF3-201ENST00000318220 ICA1Q05084 483 aa15.21■□□□□ 0.03
NBPF3-201ENST00000318220 APOBRQ0VD83 1088 aa15.21■□□□□ 0.03
NBPF3-201ENST00000318220 BMP2KLQ5H9B9 411 aa15.21■□□□□ 0.03
NBPF3-201ENST00000318220 EAF2Q96CJ1 260 aaPredicted RBP15.21■□□□□ 0.03
NBPF3-201ENST00000318220 BRIP1Q9BX63 1249 aa15.21■□□□□ 0.03
NBPF3-201ENST00000318220 TTC41PQ6P2S7 1318 aa15.21■□□□□ 0.03
NBPF3-201ENST00000318220 CPA1P15085 419 aa15.21■□□□□ 0.03
NBPF3-201ENST00000318220 SLC5A4Q9NY91 659 aa15.21■□□□□ 0.03
NBPF3-201ENST00000318220 PDE4DIPQ5VU43 2346 aa15.21■□□□□ 0.03
NBPF3-201ENST00000318220 KIF20AO95235 890 aa15.21■□□□□ 0.03
NBPF3-201ENST00000318220 RNF169Q8NCN4 708 aa15.21■□□□□ 0.03
NBPF3-201ENST00000318220 DEF6Q9H4E7 631 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms