RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 REC8O95072 547 aa11.01□□□□□ -0.65
CAPN3-201ENST00000318023 BRPF1P55201 1214 aaPredicted RBP11.01□□□□□ -0.65
CAPN3-201ENST00000318023 GRAPQ13588 217 aa11.01□□□□□ -0.65
CAPN3-201ENST00000318023 CCDC186Q7Z3E2 898 aa11.01□□□□□ -0.65
CAPN3-201ENST00000318023 ANKRD18AQ8IVF6 992 aa11.01□□□□□ -0.65
CAPN3-201ENST00000318023 GRAPLQ8TC17 118 aaPredicted RBP11.01□□□□□ -0.65
CAPN3-201ENST00000318023 KCNQ5Q9NR82 932 aa11.01□□□□□ -0.65
CAPN3-201ENST00000318023 NRBP1Q9UHY1 535 aa11.01□□□□□ -0.65
CAPN3-201ENST00000318023 GOLGA6L6A8MZA4 724 aa11.01□□□□□ -0.65
CAPN3-201ENST00000318023 APBB1O00213 710 aa11.01□□□□□ -0.65
CAPN3-201ENST00000318023 BICC1Q9H694 974 aaKnown RBP11.01□□□□□ -0.65
CAPN3-201ENST00000318023 ZBTB40Q9NUA8 1239 aa11.01□□□□□ -0.65
CAPN3-201ENST00000318023 LRRFIP2Q9Y608 721 aaKnown RBP11.01□□□□□ -0.65
CAPN3-201ENST00000318023 NUP98P52948 1817 aa11□□□□□ -0.65
CAPN3-201ENST00000318023 UFL1O94874 794 aa11□□□□□ -0.65
CAPN3-201ENST00000318023 GPSM2P81274 684 aa11□□□□□ -0.65
CAPN3-201ENST00000318023 EAPPQ56P03 285 aaPredicted RBP11□□□□□ -0.65
CAPN3-201ENST00000318023 TMED8Q6PL24 325 aaPredicted RBP11□□□□□ -0.65
CAPN3-201ENST00000318023 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11□□□□□ -0.65
CAPN3-201ENST00000318023 DRC7Q8IY82 874 aa11□□□□□ -0.65
CAPN3-201ENST00000318023 JDP2Q8WYK2 163 aa11□□□□□ -0.65
CAPN3-201ENST00000318023 IQSEC3Q9UPP2 1182 aaPredicted RBP11□□□□□ -0.65
CAPN3-201ENST00000318023 ZNF831Q5JPB2 1677 aa11□□□□□ -0.65
CAPN3-201ENST00000318023 GSPT1P15170 499 aaKnown RBP11□□□□□ -0.65
CAPN3-201ENST00000318023 E2F4Q16254 413 aa11□□□□□ -0.65
CAPN3-201ENST00000318023 SLC10A5Q5PT55 438 aa11□□□□□ -0.65
CAPN3-201ENST00000318023 CCDC183Q5T5S1 534 aa11□□□□□ -0.65
CAPN3-201ENST00000318023 RBM26Q5T8P6 1007 aaKnown RBP11□□□□□ -0.65
CAPN3-201ENST00000318023 PUS3Q9BZE2 481 aaKnown RBP11□□□□□ -0.65
CAPN3-201ENST00000318023 CNNM1Q9NRU3 951 aa11□□□□□ -0.65
CAPN3-201ENST00000318023 EXOC6BQ9Y2D4 811 aa11□□□□□ -0.65
CAPN3-201ENST00000318023 H7C1W4 665 aa11□□□□□ -0.65
CAPN3-201ENST00000318023 TRIM28Q13263 835 aaKnown RBP11□□□□□ -0.65
CAPN3-201ENST00000318023 CCDC57Q2TAC2 916 aa11□□□□□ -0.65
CAPN3-201ENST00000318023 CEP135Q66GS9 1140 aa11□□□□□ -0.65
CAPN3-201ENST00000318023 C7orf43Q8WVR3 580 aa11□□□□□ -0.65
CAPN3-201ENST00000318023 SCAF8Q9UPN6 1271 aaKnown RBP11□□□□□ -0.65
CAPN3-201ENST00000318023 PAXBP1Q9Y5B6 917 aa11□□□□□ -0.65
CAPN3-201ENST00000318023 SLX4Q8IY92 1834 aa10.99□□□□□ -0.65
CAPN3-201ENST00000318023 BRD1O95696 1058 aa10.99□□□□□ -0.65
CAPN3-201ENST00000318023 TAF1P21675 1872 aa10.99□□□□□ -0.65
CAPN3-201ENST00000318023 HTRA3P83110 453 aa10.99□□□□□ -0.65
CAPN3-201ENST00000318023 IFIT5Q13325 482 aaKnown RBP10.99□□□□□ -0.65
CAPN3-201ENST00000318023 ATF7IPQ6VMQ6 1270 aa10.99□□□□□ -0.65
CAPN3-201ENST00000318023 ZBTB12Q9Y330 459 aaPredicted RBP10.99□□□□□ -0.65
CAPN3-201ENST00000318023 LAMB4A4D0S4 1761 aa10.99□□□□□ -0.65
CAPN3-201ENST00000318023 QSER1Q2KHR3 1735 aa10.99□□□□□ -0.65
CAPN3-201ENST00000318023 UBTFL1P0CB47 393 aaPredicted RBP10.99□□□□□ -0.65
CAPN3-201ENST00000318023 GUCY2CP25092 1073 aa10.99□□□□□ -0.65
CAPN3-201ENST00000318023 KLRK1P26718 216 aa10.99□□□□□ -0.65
CAPN3-201ENST00000318023 USP44Q9H0E7 712 aa10.99□□□□□ -0.65
CAPN3-201ENST00000318023 PA2G4Q9UQ80 394 aaKnown RBP10.99□□□□□ -0.65
CAPN3-201ENST00000318023 ATP6V0A2Q9Y487 856 aa10.99□□□□□ -0.65
CAPN3-201ENST00000318023 SCN7AQ01118 1682 aa10.99□□□□□ -0.65
CAPN3-201ENST00000318023 IGHMBP2P38935 993 aaKnown RBP10.98□□□□□ -0.65
CAPN3-201ENST00000318023 ZSCAN26Q16670 478 aa10.98□□□□□ -0.65
CAPN3-201ENST00000318023 LDHAL6AQ6ZMR3 332 aa10.98□□□□□ -0.65
CAPN3-201ENST00000318023 SMARCE1Q969G3 411 aa10.98□□□□□ -0.65
CAPN3-201ENST00000318023 CRAMP1Q96RY5 1269 aa10.98□□□□□ -0.65
CAPN3-201ENST00000318023 POLLQ9UGP5 575 aa10.98□□□□□ -0.65
CAPN3-201ENST00000318023 JRKLQ9Y4A0 524 aa10.98□□□□□ -0.65
CAPN3-201ENST00000318023 POTEIP0CG38 1075 aa10.98□□□□□ -0.65
CAPN3-201ENST00000318023 POTEJP0CG39 1038 aa10.98□□□□□ -0.65
CAPN3-201ENST00000318023 IARSP41252 1262 aaKnown RBP10.98□□□□□ -0.65
CAPN3-201ENST00000318023 BMS1Q14692 1282 aaKnown RBP10.98□□□□□ -0.65
CAPN3-201ENST00000318023 WASHC4Q2M389 1173 aa10.98□□□□□ -0.65
CAPN3-201ENST00000318023 CLEC11AQ9Y240 323 aa10.98□□□□□ -0.65
CAPN3-201ENST00000318023 CEP83Q9Y592 693 aa10.98□□□□□ -0.65
CAPN3-201ENST00000318023 FHOD1Q9Y613 1164 aa10.98□□□□□ -0.65
CAPN3-201ENST00000318023 ZNF541Q9H0D2 1346 aa10.98□□□□□ -0.65
CAPN3-201ENST00000318023 KLRG2A4D1S0 409 aaPredicted RBP10.98□□□□□ -0.65
CAPN3-201ENST00000318023 USP27XA6NNY8 438 aa10.98□□□□□ -0.65
CAPN3-201ENST00000318023 BBOX1O75936 387 aa10.98□□□□□ -0.65
CAPN3-201ENST00000318023 TPM3P06753 285 aa10.98□□□□□ -0.65
CAPN3-201ENST00000318023 HOXA10P31260 410 aaPredicted RBP10.98□□□□□ -0.65
CAPN3-201ENST00000318023 DNAJC21Q5F1R6 531 aaKnown RBP10.98□□□□□ -0.65
CAPN3-201ENST00000318023 RTKN2Q8IZC4 609 aa10.98□□□□□ -0.65
CAPN3-201ENST00000318023 TMX3Q96JJ7 454 aa10.98□□□□□ -0.65
CAPN3-201ENST00000318023 MXD3Q9BW11 206 aa10.98□□□□□ -0.65
CAPN3-201ENST00000318023 ZCCHC17Q9NP64 241 aaKnown RBP10.98□□□□□ -0.65
CAPN3-201ENST00000318023 TNRC6CQ9HCJ0 1690 aaKnown RBP10.97□□□□□ -0.65
CAPN3-201ENST00000318023 ANKRD18BA2A2Z9 1011 aa10.97□□□□□ -0.65
CAPN3-201ENST00000318023 FKBP4Q02790 459 aaKnown RBP eCLIP10.97□□□□□ -0.65
CAPN3-201ENST00000318023 SF3B3Q15393 1217 aaKnown RBP10.97□□□□□ -0.65
CAPN3-201ENST00000318023 TSGA10IPQ3SY00 556 aa10.97□□□□□ -0.65
CAPN3-201ENST00000318023 CREBRFQ8IUR6 639 aa10.97□□□□□ -0.65
CAPN3-201ENST00000318023 KAZALD1Q96I82 304 aa10.97□□□□□ -0.65
CAPN3-201ENST00000318023 CDC5LQ99459 802 aaKnown RBP10.97□□□□□ -0.65
CAPN3-201ENST00000318023 API5Q9BZZ5 524 aaKnown RBP10.97□□□□□ -0.65
CAPN3-201ENST00000318023 SHTN1A0MZ66 631 aa10.97□□□□□ -0.65
CAPN3-201ENST00000318023 CCDC172P0C7W6 258 aa10.97□□□□□ -0.65
CAPN3-201ENST00000318023 PLA2G4AP47712 749 aa10.97□□□□□ -0.65
CAPN3-201ENST00000318023 ALDH1L2Q3SY69 923 aa10.97□□□□□ -0.65
CAPN3-201ENST00000318023 DPY19L2Q6NUT2 758 aa10.97□□□□□ -0.65
CAPN3-201ENST00000318023 TXNRD3Q86VQ6 643 aa10.97□□□□□ -0.65
CAPN3-201ENST00000318023 ZC3H12CQ9C0D7 883 aaKnown RBP10.97□□□□□ -0.65
CAPN3-201ENST00000318023 CNPY2Q9Y2B0 182 aa10.97□□□□□ -0.65
CAPN3-201ENST00000318023 MX1P20591 662 aa10.96□□□□□ -0.65
CAPN3-201ENST00000318023 NEK4P51957 841 aa10.96□□□□□ -0.65
CAPN3-201ENST00000318023 FOXO4P98177 505 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms