RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 SRGAP3O43295 1099 aa4.19□□□□□ -1.74
GEN1-201ENST00000317402 CDC25AP30304 524 aa4.19□□□□□ -1.74
GEN1-201ENST00000317402 APBA1Q02410 837 aa4.19□□□□□ -1.74
GEN1-201ENST00000317402 SGSM1Q2NKQ1 1148 aa4.19□□□□□ -1.74
GEN1-201ENST00000317402 COPS6Q7L5N1 327 aa4.19□□□□□ -1.74
GEN1-201ENST00000317402 MED12LQ86YW9 2145 aa4.19□□□□□ -1.74
GEN1-201ENST00000317402 GSPT2Q8IYD1 628 aaKnown RBP4.19□□□□□ -1.74
GEN1-201ENST00000317402 TTC41PQ6P2S7 1318 aa4.19□□□□□ -1.74
GEN1-201ENST00000317402 POLR3AO14802 1390 aaPredicted RBP4.19□□□□□ -1.74
GEN1-201ENST00000317402 ST18O60284 1047 aa4.19□□□□□ -1.74
GEN1-201ENST00000317402 PRR29P0C7W0 189 aa4.19□□□□□ -1.74
GEN1-201ENST00000317402 CCDC186Q7Z3E2 898 aa4.19□□□□□ -1.74
GEN1-201ENST00000317402 MYO15AQ9UKN7 3530 aa4.18□□□□□ -1.74
GEN1-201ENST00000317402 HDGFL1Q5TGJ6 251 aa4.18□□□□□ -1.74
GEN1-201ENST00000317402 AP1ARQ63HQ0 302 aa4.18□□□□□ -1.74
GEN1-201ENST00000317402 ZNF530Q6P9A1 599 aaPredicted RBP4.18□□□□□ -1.74
GEN1-201ENST00000317402 TRMT44Q8IYL2 757 aaKnown RBP4.18□□□□□ -1.74
GEN1-201ENST00000317402 RUFY1Q96T51 708 aa4.18□□□□□ -1.74
GEN1-201ENST00000317402 DBNDD2Q9BQY9 259 aa4.18□□□□□ -1.74
GEN1-201ENST00000317402 RSPH14Q9UHP6 348 aa4.18□□□□□ -1.74
GEN1-201ENST00000317402 CLIC4Q9Y696 253 aa4.18□□□□□ -1.74
GEN1-201ENST00000317402 BCL2L12Q9HB09 334 aa4.18□□□□□ -1.74
GEN1-201ENST00000317402 CREBBPQ92793 2442 aa4.18□□□□□ -1.74
GEN1-201ENST00000317402 GUCY1A2P33402 732 aa4.18□□□□□ -1.74
GEN1-201ENST00000317402 SMYD4Q8IYR2 804 aaPredicted RBP4.18□□□□□ -1.74
GEN1-201ENST00000317402 ASAP1Q9ULH1 1129 aa4.18□□□□□ -1.74
GEN1-201ENST00000317402 IL16Q14005 1332 aa4.18□□□□□ -1.74
GEN1-201ENST00000317402 ZNF142P52746 1687 aaPredicted RBP4.18□□□□□ -1.74
GEN1-201ENST00000317402 NEBLO76041 1014 aa4.18□□□□□ -1.74
GEN1-201ENST00000317402 RIC3Q7Z5B4 369 aa4.18□□□□□ -1.74
GEN1-201ENST00000317402 PXDNQ92626 1479 aa4.18□□□□□ -1.74
GEN1-201ENST00000317402 NPHP3Q7Z494 1330 aa4.18□□□□□ -1.74
GEN1-201ENST00000317402 A0A1B0GUL7 405 aa4.18□□□□□ -1.74
GEN1-201ENST00000317402 CDC45O75419 566 aa4.18□□□□□ -1.74
GEN1-201ENST00000317402 SYT1P21579 422 aa4.18□□□□□ -1.74
GEN1-201ENST00000317402 GTF3C6Q969F1 213 aa4.18□□□□□ -1.74
GEN1-201ENST00000317402 MARCKSP29966 332 aaPredicted RBP4.18□□□□□ -1.74
GEN1-201ENST00000317402 BIRC2Q13490 618 aa4.18□□□□□ -1.74
GEN1-201ENST00000317402 MTF1Q14872 753 aa4.18□□□□□ -1.74
GEN1-201ENST00000317402 UTP14CQ5TAP6 766 aaKnown RBP4.18□□□□□ -1.74
GEN1-201ENST00000317402 LMTK3Q96Q04 1460 aa4.18□□□□□ -1.74
GEN1-201ENST00000317402 KIF13BQ9NQT8 1826 aa4.18□□□□□ -1.74
GEN1-201ENST00000317402 SPG11Q96JI7 2443 aa4.18□□□□□ -1.74
GEN1-201ENST00000317402 ZPR1O75312 459 aa4.18□□□□□ -1.74
GEN1-201ENST00000317402 ATP1A3P13637 1013 aa4.18□□□□□ -1.74
GEN1-201ENST00000317402 PDE4BQ07343 736 aa4.18□□□□□ -1.74
GEN1-201ENST00000317402 LCMT1Q9UIC8 334 aa4.18□□□□□ -1.74
GEN1-201ENST00000317402 PALLDQ8WX93 1383 aa4.18□□□□□ -1.74
GEN1-201ENST00000317402 ABCC4O15439 1325 aa4.18□□□□□ -1.74
GEN1-201ENST00000317402 PRKAB2O43741 272 aa4.18□□□□□ -1.74
GEN1-201ENST00000317402 TOB2Q14106 344 aaPredicted RBP4.18□□□□□ -1.74
GEN1-201ENST00000317402 PPP2R5AQ15172 486 aa4.18□□□□□ -1.74
GEN1-201ENST00000317402 TTC19Q6DKK2 380 aaPredicted RBP4.18□□□□□ -1.74
GEN1-201ENST00000317402 LSRQ86X29 649 aaPredicted RBP4.18□□□□□ -1.74
GEN1-201ENST00000317402 SIRT1Q96EB6 747 aa4.18□□□□□ -1.74
GEN1-201ENST00000317402 FAM89AQ96GI7 184 aa4.18□□□□□ -1.74
GEN1-201ENST00000317402 LSG1Q9H089 658 aaKnown RBP4.18□□□□□ -1.74
GEN1-201ENST00000317402 TRIM10Q9UDY6 481 aa4.18□□□□□ -1.74
GEN1-201ENST00000317402 PIK3R4Q99570 1358 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 M0R2C6 588 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 CTDNEP1O95476 244 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 TRIM21P19474 475 aaKnown RBP4.17□□□□□ -1.74
GEN1-201ENST00000317402 TPD52L1Q16890 204 aaPredicted RBP4.17□□□□□ -1.74
GEN1-201ENST00000317402 SHROOM1Q2M3G4 852 aaPredicted RBP4.17□□□□□ -1.74
GEN1-201ENST00000317402 ILDR1Q86SU0 546 aaPredicted RBP4.17□□□□□ -1.74
GEN1-201ENST00000317402 WDR63Q8IWG1 891 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 TMEM130Q8N3G9 435 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 WDR66Q8TBY9 1149 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 PRDM1O75626 825 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 MAP2K2P36507 400 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 EARS2Q5JPH6 523 aaKnown RBP4.17□□□□□ -1.74
GEN1-201ENST00000317402 TRMT1LQ7Z2T5 733 aaKnown RBP4.17□□□□□ -1.74
GEN1-201ENST00000317402 CCDC112Q8NEF3 446 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 XAGE3Q8WTP9 111 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 CDC27P30260 824 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 GBP2P32456 591 aaPredicted RBP4.17□□□□□ -1.74
GEN1-201ENST00000317402 FLIIQ13045 1269 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 EP400NLQ6ZTU2 488 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 AMOTL1Q8IY63 956 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 C10orf67Q8IYJ2 551 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 ZNF513Q8N8E2 541 aaPredicted RBP4.17□□□□□ -1.74
GEN1-201ENST00000317402 DNAI2Q9GZS0 605 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 FAM107BQ9H098 131 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 EHD2Q9NZN4 543 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 DDX19BQ9UMR2 479 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 CCDC61Q9Y6R9 512 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 TECPR2O15040 1411 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 EHD4Q9H223 541 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 LAMA4Q16363 1823 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 HDAC1Q13547 482 aaPredicted RBP4.17□□□□□ -1.74
GEN1-201ENST00000317402 AACSQ86V21 672 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 STK31Q9BXU1 1019 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 NAT10Q9H0A0 1025 aaKnown RBP4.17□□□□□ -1.74
GEN1-201ENST00000317402 IKZF4Q9H2S9 585 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 A0A1B0GVL5 298 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 EIF4E1BA6NMX2 242 aaKnown RBP4.17□□□□□ -1.74
GEN1-201ENST00000317402 CTDSPL2Q05D32 466 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 SEPT14Q6ZU15 432 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 USP49Q70CQ1 688 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 FILIP1Q7Z7B0 1213 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms