RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 RBSNQ9H1K0 784 aa6.01□□□□□ -1.45
SMCO3-201ENST00000316048 ABCC9O60706 1549 aa6□□□□□ -1.45
SMCO3-201ENST00000316048 FAM221AA4D161 298 aa6□□□□□ -1.45
SMCO3-201ENST00000316048 ESRRAP11474 423 aaPredicted RBP6□□□□□ -1.45
SMCO3-201ENST00000316048 CDK8P49336 464 aa6□□□□□ -1.45
SMCO3-201ENST00000316048 SERINC3Q13530 473 aa6□□□□□ -1.45
SMCO3-201ENST00000316048 LAPTM4AQ15012 233 aa6□□□□□ -1.45
SMCO3-201ENST00000316048 PSAPL1Q6NUJ1 521 aa6□□□□□ -1.45
SMCO3-201ENST00000316048 ELMSAN1Q6PJG2 1045 aa6□□□□□ -1.45
SMCO3-201ENST00000316048 PDZRN4Q6ZMN7 1036 aaPredicted RBP6□□□□□ -1.45
SMCO3-201ENST00000316048 MICALL1Q8N3F8 863 aa6□□□□□ -1.45
SMCO3-201ENST00000316048 GPR161Q8N6U8 529 aaKnown RBP6□□□□□ -1.45
SMCO3-201ENST00000316048 NUDT8Q8WV74 236 aa6□□□□□ -1.45
SMCO3-201ENST00000316048 SHDQ96IW2 340 aa6□□□□□ -1.45
SMCO3-201ENST00000316048 ZFYVE1Q9HBF4 777 aa6□□□□□ -1.45
SMCO3-201ENST00000316048 RPS26P62854 115 aaKnown RBP5.99□□□□□ -1.45
SMCO3-201ENST00000316048 NOP9Q86U38 636 aaKnown RBP5.99□□□□□ -1.45
SMCO3-201ENST00000316048 SLITRK4Q8IW52 837 aa5.99□□□□□ -1.45
SMCO3-201ENST00000316048 CKAP2LQ8IYA6 745 aa5.99□□□□□ -1.45
SMCO3-201ENST00000316048 PUS7Q96PZ0 661 aaKnown RBP5.99□□□□□ -1.45
SMCO3-201ENST00000316048 MIR1-1HGQ9H1L0 117 aa5.99□□□□□ -1.45
SMCO3-201ENST00000316048 CBX8Q9HC52 389 aa5.99□□□□□ -1.45
SMCO3-201ENST00000316048 CDK11AQ9UQ88 783 aaPredicted RBP5.99□□□□□ -1.45
SMCO3-201ENST00000316048 TBX22Q9Y458 520 aa5.99□□□□□ -1.45
SMCO3-201ENST00000316048 ECEL1O95672 775 aa5.99□□□□□ -1.45
SMCO3-201ENST00000316048 PTPRAP18433 802 aa5.99□□□□□ -1.45
SMCO3-201ENST00000316048 GATAD2BQ8WXI9 593 aa5.99□□□□□ -1.45
SMCO3-201ENST00000316048 NANOS1Q8WY41 292 aaKnown RBP5.99□□□□□ -1.45
SMCO3-201ENST00000316048 K7ELQ4 463 aaPredicted RBP5.98□□□□□ -1.45
SMCO3-201ENST00000316048 KLF4O43474 513 aa5.98□□□□□ -1.45
SMCO3-201ENST00000316048 SELPP16109 830 aa5.98□□□□□ -1.45
SMCO3-201ENST00000316048 NME2P22392 152 aa5.98□□□□□ -1.45
SMCO3-201ENST00000316048 MCM4P33991 863 aa5.98□□□□□ -1.45
SMCO3-201ENST00000316048 PPP2R3AQ06190 1150 aa5.98□□□□□ -1.45
SMCO3-201ENST00000316048 CPLX3Q8WVH0 158 aa5.98□□□□□ -1.45
SMCO3-201ENST00000316048 SRRTQ9BXP5 876 aaKnown RBP5.98□□□□□ -1.45
SMCO3-201ENST00000316048 ZC3H12CQ9C0D7 883 aaKnown RBP5.98□□□□□ -1.45
SMCO3-201ENST00000316048 GGA1Q9UJY5 639 aa5.98□□□□□ -1.45
SMCO3-201ENST00000316048 SOX1O00570 391 aaPredicted RBP5.98□□□□□ -1.45
SMCO3-201ENST00000316048 ADH6P28332 368 aa5.98□□□□□ -1.45
SMCO3-201ENST00000316048 PCSK7Q16549 785 aa5.98□□□□□ -1.45
SMCO3-201ENST00000316048 LLGL2Q6P1M3 1020 aa5.98□□□□□ -1.45
SMCO3-201ENST00000316048 GK5Q6ZS86 529 aa5.98□□□□□ -1.45
SMCO3-201ENST00000316048 PDZD3Q86UT5 571 aa5.98□□□□□ -1.45
SMCO3-201ENST00000316048 LRRC3Q9BY71 257 aa5.98□□□□□ -1.45
SMCO3-201ENST00000316048 ADAM19Q9H013 955 aa5.98□□□□□ -1.45
SMCO3-201ENST00000316048 BRMS1Q9HCU9 246 aa5.98□□□□□ -1.45
SMCO3-201ENST00000316048 MRPL42Q9Y6G3 142 aaKnown RBP5.98□□□□□ -1.45
SMCO3-201ENST00000316048 TLDC2A0PJX2 215 aa5.97□□□□□ -1.45
SMCO3-201ENST00000316048 CCDC85CA6NKD9 419 aa5.97□□□□□ -1.45
SMCO3-201ENST00000316048 SMAD7O15105 426 aaKnown RBP5.97□□□□□ -1.45
SMCO3-201ENST00000316048 GRIN3BO60391 1043 aa5.97□□□□□ -1.45
SMCO3-201ENST00000316048 LMNB1P20700 586 aa5.97□□□□□ -1.45
SMCO3-201ENST00000316048 CLCQ05315 142 aa5.97□□□□□ -1.45
SMCO3-201ENST00000316048 ZNF252P-AS1Q0IIN9 211 aa5.97□□□□□ -1.45
SMCO3-201ENST00000316048 IKBKEQ14164 716 aa5.97□□□□□ -1.45
SMCO3-201ENST00000316048 GRIK5Q16478 980 aa5.97□□□□□ -1.45
SMCO3-201ENST00000316048 RNFT1Q5M7Z0 435 aa5.97□□□□□ -1.45
SMCO3-201ENST00000316048 FBXW10Q5XX13 1052 aa5.97□□□□□ -1.45
SMCO3-201ENST00000316048 ZNF746Q6NUN9 644 aaPredicted RBP5.97□□□□□ -1.45
SMCO3-201ENST00000316048 REC114Q7Z4M0 266 aa5.97□□□□□ -1.45
SMCO3-201ENST00000316048 CELF2-AS1Q8N7Q2 184 aa5.97□□□□□ -1.45
SMCO3-201ENST00000316048 SLC7A3Q8WY07 619 aa5.97□□□□□ -1.45
SMCO3-201ENST00000316048 IRX2Q9BZI1 471 aaPredicted RBP5.97□□□□□ -1.45
SMCO3-201ENST00000316048 TMA7Q9Y2S6 64 aaKnown RBP5.97□□□□□ -1.45
SMCO3-201ENST00000316048 STARD13Q9Y3M8 1113 aa5.97□□□□□ -1.45
SMCO3-201ENST00000316048 NACADO15069 1562 aa5.97□□□□□ -1.45
SMCO3-201ENST00000316048 ADARB2-AS1A8MUL3 147 aa5.96□□□□□ -1.45
SMCO3-201ENST00000316048 CILPO75339 1184 aa5.96□□□□□ -1.45
SMCO3-201ENST00000316048 ARAFP10398 606 aa5.96□□□□□ -1.45
SMCO3-201ENST00000316048 MAP1SQ66K74 1059 aaPredicted RBP5.96□□□□□ -1.45
SMCO3-201ENST00000316048 C8orf86Q6ZUL3 223 aa5.96□□□□□ -1.45
SMCO3-201ENST00000316048 ARNTP27540 789 aa5.96□□□□□ -1.46
SMCO3-201ENST00000316048 RAB33AQ14088 237 aa5.96□□□□□ -1.46
SMCO3-201ENST00000316048 MPP2Q14168 576 aa5.96□□□□□ -1.46
SMCO3-201ENST00000316048 AVENQ9NQS1 362 aaPredicted RBP5.96□□□□□ -1.46
SMCO3-201ENST00000316048 STRIP2Q9ULQ0 834 aa5.96□□□□□ -1.46
SMCO3-201ENST00000316048 POLR3KQ9Y2Y1 108 aaPredicted RBP5.96□□□□□ -1.46
SMCO3-201ENST00000316048 FAM221BA6H8Z2 402 aa5.95□□□□□ -1.46
SMCO3-201ENST00000316048 ALBP02768 609 aa5.95□□□□□ -1.46
SMCO3-201ENST00000316048 CTSBP07858 339 aa5.95□□□□□ -1.46
SMCO3-201ENST00000316048 CDC27P30260 824 aa5.95□□□□□ -1.46
SMCO3-201ENST00000316048 BAG6P46379 1132 aa5.95□□□□□ -1.46
SMCO3-201ENST00000316048 COL9A2Q14055 689 aaPredicted RBP5.95□□□□□ -1.46
SMCO3-201ENST00000316048 SOGA3Q5TF21 947 aa5.95□□□□□ -1.46
SMCO3-201ENST00000316048 SDE2Q6IQ49 451 aa5.95□□□□□ -1.46
SMCO3-201ENST00000316048 C1orf229Q6ZS94 237 aaPredicted RBP5.95□□□□□ -1.46
SMCO3-201ENST00000316048 FERD3LQ96RJ6 166 aa5.95□□□□□ -1.46
SMCO3-201ENST00000316048 TRIM55Q9BYV6 548 aa5.95□□□□□ -1.46
SMCO3-201ENST00000316048 PRKAG3Q9UGI9 489 aa5.95□□□□□ -1.46
SMCO3-201ENST00000316048 CYP8B1Q9UNU6 501 aa5.95□□□□□ -1.46
SMCO3-201ENST00000316048 ELOA3CA0A087WX78 387 aaPredicted RBP5.95□□□□□ -1.46
SMCO3-201ENST00000316048 ELOA3DA6NLF2 546 aaPredicted RBP5.95□□□□□ -1.46
SMCO3-201ENST00000316048 GSTM4Q03013 218 aa5.95□□□□□ -1.46
SMCO3-201ENST00000316048 RASA3Q14644 834 aa5.95□□□□□ -1.46
SMCO3-201ENST00000316048 CWF19L2Q2TBE0 894 aaKnown RBP5.95□□□□□ -1.46
SMCO3-201ENST00000316048 ELOA3BQ3SY89 546 aa5.95□□□□□ -1.46
SMCO3-201ENST00000316048 Q6ZNB5 142 aa5.95□□□□□ -1.46
SMCO3-201ENST00000316048 ELOA3Q8NG57 546 aa5.95□□□□□ -1.46
SMCO3-201ENST00000316048 CARD10Q9BWT7 1032 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms