RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 APBA3O96018 575 aa9.35□□□□□ -0.91
CNOT4-201ENST00000315544 CBX8Q9HC52 389 aa9.35□□□□□ -0.91
CNOT4-201ENST00000315544 NLRP2Q9NX02 1062 aa9.35□□□□□ -0.91
CNOT4-201ENST00000315544 USP27XA6NNY8 438 aa9.35□□□□□ -0.91
CNOT4-201ENST00000315544 BHMG1C9JSJ3 638 aaPredicted RBP9.35□□□□□ -0.91
CNOT4-201ENST00000315544 ZRANB2O95218 330 aaKnown RBP eCLIP9.35□□□□□ -0.917e-6■■■■■ 37.3
CNOT4-201ENST00000315544 ALX1Q15699 326 aa9.35□□□□□ -0.91
CNOT4-201ENST00000315544 RTF1Q92541 710 aaKnown RBP9.35□□□□□ -0.91
CNOT4-201ENST00000315544 EPB41L4AQ9HCS5 686 aaPredicted RBP9.35□□□□□ -0.91
CNOT4-201ENST00000315544 RTEL1Q9NZ71 1219 aa9.35□□□□□ -0.91
CNOT4-201ENST00000315544 LOXHD1Q8IVV2 1947 aa9.35□□□□□ -0.91
CNOT4-201ENST00000315544 ROBO3Q96MS0 1386 aa9.35□□□□□ -0.91
CNOT4-201ENST00000315544 WDHD1O75717 1129 aaPredicted RBP9.35□□□□□ -0.91
CNOT4-201ENST00000315544 CASTP20810 708 aaKnown RBP9.35□□□□□ -0.91
CNOT4-201ENST00000315544 CNTROBQ8N137 903 aa9.35□□□□□ -0.91
CNOT4-201ENST00000315544 LRRC15Q8TF66 581 aa9.35□□□□□ -0.91
CNOT4-201ENST00000315544 RAPGEF4Q8WZA2 1011 aa9.35□□□□□ -0.91
CNOT4-201ENST00000315544 MRFAP1L1Q96HT8 127 aa9.35□□□□□ -0.91
CNOT4-201ENST00000315544 DBNDD2Q9BQY9 259 aa9.35□□□□□ -0.91
CNOT4-201ENST00000315544 FTOQ9C0B1 505 aaKnown RBP eCLIP9.35□□□□□ -0.91
CNOT4-201ENST00000315544 SENP2Q9HC62 589 aa9.35□□□□□ -0.91
CNOT4-201ENST00000315544 NRBP1Q9UHY1 535 aa9.35□□□□□ -0.91
CNOT4-201ENST00000315544 A0A1W2PQ27 194 aa9.34□□□□□ -0.91
CNOT4-201ENST00000315544 A0A1W2PQ64 194 aa9.34□□□□□ -0.91
CNOT4-201ENST00000315544 A0A1W2PQD8 194 aa9.34□□□□□ -0.91
CNOT4-201ENST00000315544 H2AFXP16104 143 aaPredicted RBP9.34□□□□□ -0.91
CNOT4-201ENST00000315544 DDR1Q08345 913 aa9.34□□□□□ -0.91
CNOT4-201ENST00000315544 UTP14CQ5TAP6 766 aaKnown RBP9.34□□□□□ -0.91
CNOT4-201ENST00000315544 CWC27Q6UX04 472 aaKnown RBP9.34□□□□□ -0.91
CNOT4-201ENST00000315544 TTLL7Q6ZT98 887 aa9.34□□□□□ -0.91
CNOT4-201ENST00000315544 XAGE3Q8WTP9 111 aa9.34□□□□□ -0.91
CNOT4-201ENST00000315544 SLC35G1Q2M3R5 365 aa9.34□□□□□ -0.91
CNOT4-201ENST00000315544 LRRC24Q50LG9 513 aa9.34□□□□□ -0.91
CNOT4-201ENST00000315544 SGMS1Q86VZ5 419 aa9.34□□□□□ -0.91
CNOT4-201ENST00000315544 ERC1Q8IUD2 1116 aa9.34□□□□□ -0.91
CNOT4-201ENST00000315544 SURF6O75683 361 aaKnown RBP9.34□□□□□ -0.92
CNOT4-201ENST00000315544 CDC27P30260 824 aa9.34□□□□□ -0.92
CNOT4-201ENST00000315544 LRRN4CLQ8ND94 238 aa9.34□□□□□ -0.92
CNOT4-201ENST00000315544 OLIG1Q8TAK6 271 aa9.34□□□□□ -0.92
CNOT4-201ENST00000315544 ZBTB48P10074 688 aaPredicted RBP9.33□□□□□ -0.92
CNOT4-201ENST00000315544 MCCD1P59942 119 aaPredicted RBP9.33□□□□□ -0.92
CNOT4-201ENST00000315544 E4F1Q66K89 784 aaPredicted RBP9.33□□□□□ -0.92
CNOT4-201ENST00000315544 ZNF530Q6P9A1 599 aaPredicted RBP9.33□□□□□ -0.92
CNOT4-201ENST00000315544 LINC00301Q8NCQ3 95 aa9.33□□□□□ -0.92
CNOT4-201ENST00000315544 CACTINQ8WUQ7 758 aaKnown RBP9.33□□□□□ -0.92
CNOT4-201ENST00000315544 TSPY26PQ9H489 355 aa9.33□□□□□ -0.92
CNOT4-201ENST00000315544 POLR3EQ9NVU0 708 aa9.33□□□□□ -0.92
CNOT4-201ENST00000315544 CTNNA3Q9UI47 895 aa9.33□□□□□ -0.92
CNOT4-201ENST00000315544 WNT7AO00755 349 aa9.33□□□□□ -0.92
CNOT4-201ENST00000315544 SLC39A6Q13433 755 aa9.33□□□□□ -0.92
CNOT4-201ENST00000315544 PRPF40BQ6NWY9 871 aaKnown RBP9.33□□□□□ -0.92
CNOT4-201ENST00000315544 FAM173BQ6P4H8 233 aa9.33□□□□□ -0.92
CNOT4-201ENST00000315544 TEX13AQ9BXU3 409 aaPredicted RBP9.33□□□□□ -0.92
CNOT4-201ENST00000315544 KAT6BQ8WYB5 2073 aa9.33□□□□□ -0.92
CNOT4-201ENST00000315544 STK36Q9NRP7 1315 aa9.33□□□□□ -0.92
CNOT4-201ENST00000315544 E7EWF7 191 aa9.33□□□□□ -0.92
CNOT4-201ENST00000315544 HOXA10P31260 410 aaPredicted RBP9.33□□□□□ -0.92
CNOT4-201ENST00000315544 ZNF75DP51815 510 aa9.33□□□□□ -0.92
CNOT4-201ENST00000315544 FAM182BQ5T319 152 aa9.33□□□□□ -0.92
CNOT4-201ENST00000315544 ZSCAN25Q6NSZ9 544 aa9.33□□□□□ -0.92
CNOT4-201ENST00000315544 ARMCX5Q6P1M9 558 aa9.33□□□□□ -0.92
CNOT4-201ENST00000315544 COPS6Q7L5N1 327 aa9.33□□□□□ -0.92
CNOT4-201ENST00000315544 C17orf53Q8N3J3 647 aaPredicted RBP9.33□□□□□ -0.92
CNOT4-201ENST00000315544 NECAB1Q8N987 351 aa9.33□□□□□ -0.92
CNOT4-201ENST00000315544 RTFDC1Q9BY42 306 aaPredicted RBP9.33□□□□□ -0.92
CNOT4-201ENST00000315544 ADCY5O95622 1261 aa9.32□□□□□ -0.92
CNOT4-201ENST00000315544 CRKLP46109 303 aaKnown RBP9.32□□□□□ -0.92
CNOT4-201ENST00000315544 NOLC1Q14978 699 aaKnown RBP eCLIP9.32□□□□□ -0.92
CNOT4-201ENST00000315544 SEC23AQ15436 765 aa9.32□□□□□ -0.92
CNOT4-201ENST00000315544 NDUFB9Q9Y6M9 179 aa9.32□□□□□ -0.92
CNOT4-201ENST00000315544 TGFB2P61812 414 aa9.32□□□□□ -0.92
CNOT4-201ENST00000315544 HSP90AB4PQ58FF6 505 aa9.32□□□□□ -0.92
CNOT4-201ENST00000315544 ATL3Q6DD88 541 aa9.32□□□□□ -0.92
CNOT4-201ENST00000315544 SASS6Q6UVJ0 657 aa9.32□□□□□ -0.92
CNOT4-201ENST00000315544 CCDC129Q6ZRS4 1044 aa9.32□□□□□ -0.92
CNOT4-201ENST00000315544 KIFC2Q96AC6 838 aa9.32□□□□□ -0.92
CNOT4-201ENST00000315544 LARP6Q9BRS8 491 aaKnown RBP9.32□□□□□ -0.92
CNOT4-201ENST00000315544 PUS3Q9BZE2 481 aaKnown RBP9.32□□□□□ -0.92
CNOT4-201ENST00000315544 ANAPC4Q9UJX5 808 aa9.32□□□□□ -0.92
CNOT4-201ENST00000315544 MCAMP43121 646 aa9.32□□□□□ -0.92
CNOT4-201ENST00000315544 C4orf32Q8N8J7 132 aa9.32□□□□□ -0.92
CNOT4-201ENST00000315544 PRIMPOLQ96LW4 560 aa9.32□□□□□ -0.92
CNOT4-201ENST00000315544 GPHNQ9NQX3 736 aaPredicted RBP9.32□□□□□ -0.92
CNOT4-201ENST00000315544 PDRG1Q9NUG6 133 aa9.32□□□□□ -0.92
CNOT4-201ENST00000315544 COL4A4P53420 1690 aaPredicted RBP9.31□□□□□ -0.92
CNOT4-201ENST00000315544 DPY19L2P1Q6NXN4 242 aa9.31□□□□□ -0.92
CNOT4-201ENST00000315544 CYB5R4Q7L1T6 521 aa9.31□□□□□ -0.92
CNOT4-201ENST00000315544 PDS5AQ29RF7 1337 aaKnown RBP9.31□□□□□ -0.92
CNOT4-201ENST00000315544 FRMPD3Q5JV73 1810 aa9.31□□□□□ -0.92
CNOT4-201ENST00000315544 MGAMO43451 1857 aa9.31□□□□□ -0.92
CNOT4-201ENST00000315544 SNRPA1P09661 255 aaKnown RBP9.31□□□□□ -0.92
CNOT4-201ENST00000315544 PRELPP51888 382 aa9.31□□□□□ -0.92
CNOT4-201ENST00000315544 TYRO3Q06418 890 aa9.31□□□□□ -0.92
CNOT4-201ENST00000315544 GIMAP6Q6P9H5 292 aa9.31□□□□□ -0.92
CNOT4-201ENST00000315544 TBC1D10CQ8IV04 446 aa9.31□□□□□ -0.92
CNOT4-201ENST00000315544 STK11IPQ8N1F8 1099 aa9.31□□□□□ -0.92
CNOT4-201ENST00000315544 MTRQ99707 1265 aa9.31□□□□□ -0.92
CNOT4-201ENST00000315544 PUS7LQ9H0K6 701 aaKnown RBP9.31□□□□□ -0.92
CNOT4-201ENST00000315544 UBE2Q2LH0YL09 131 aa9.3□□□□□ -0.92
CNOT4-201ENST00000315544 ECM1Q16610 540 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms