RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 BICC1Q9H694 974 aaKnown RBP10.24□□□□□ -0.77
TPM3-203ENST00000312970 ANGEL1Q9UNK9 670 aaKnown RBP10.24□□□□□ -0.77
TPM3-203ENST00000312970 JAG2Q9Y219 1238 aa10.24□□□□□ -0.77
TPM3-203ENST00000312970 PCDHAC2Q9Y5I4 1007 aa10.24□□□□□ -0.77
TPM3-203ENST00000312970 CLRN2A0PK11 232 aa10.23□□□□□ -0.77
TPM3-203ENST00000312970 UNCXA6NJT0 531 aa10.23□□□□□ -0.77
TPM3-203ENST00000312970 GTPBP6O43824 516 aaPredicted RBP10.23□□□□□ -0.77
TPM3-203ENST00000312970 TBC1D8O95759 1140 aa10.23□□□□□ -0.77
TPM3-203ENST00000312970 SREBF2Q12772 1141 aa10.23□□□□□ -0.77
TPM3-203ENST00000312970 MKRN3Q13064 507 aaKnown RBP10.23□□□□□ -0.77
TPM3-203ENST00000312970 MAP3K11Q16584 847 aa10.23□□□□□ -0.77
TPM3-203ENST00000312970 ALDH1L2Q3SY69 923 aa10.23□□□□□ -0.77
TPM3-203ENST00000312970 CAVIN4Q5BKX8 364 aa10.23□□□□□ -0.77
TPM3-203ENST00000312970 MFSD14BQ5SR56 506 aa10.23□□□□□ -0.77
TPM3-203ENST00000312970 VPS37DQ86XT2 251 aa10.23□□□□□ -0.77
TPM3-203ENST00000312970 USP44Q9H0E7 712 aa10.23□□□□□ -0.77
TPM3-203ENST00000312970 ZBTB47Q9UFB7 747 aaPredicted RBP10.23□□□□□ -0.77
TPM3-203ENST00000312970 SERPINA10Q9UK55 444 aa10.23□□□□□ -0.77
TPM3-203ENST00000312970 ECM29Q5VYK3 1845 aa10.23□□□□□ -0.77
TPM3-203ENST00000312970 A0A1B0GUL6 1792 aa10.22□□□□□ -0.77
TPM3-203ENST00000312970 CEP290O15078 2479 aa10.22□□□□□ -0.77
TPM3-203ENST00000312970 PDE8BO95263 885 aa10.22□□□□□ -0.77
TPM3-203ENST00000312970 INHBEP58166 350 aa10.22□□□□□ -0.77
TPM3-203ENST00000312970 LRRC24Q50LG9 513 aa10.22□□□□□ -0.77
TPM3-203ENST00000312970 HABP4Q5JVS0 413 aaKnown RBP10.22□□□□□ -0.77
TPM3-203ENST00000312970 METTL24Q5JXM2 366 aa10.22□□□□□ -0.77
TPM3-203ENST00000312970 SPRYD7Q5W111 196 aa10.22□□□□□ -0.77
TPM3-203ENST00000312970 FBXO33Q7Z6M2 555 aa10.22□□□□□ -0.77
TPM3-203ENST00000312970 ANKRD44Q8N8A2 993 aa10.22□□□□□ -0.77
TPM3-203ENST00000312970 VEZTQ9HBM0 779 aa10.22□□□□□ -0.77
TPM3-203ENST00000312970 TTF2Q9UNY4 1162 aaKnown RBP10.22□□□□□ -0.77
TPM3-203ENST00000312970 FZD1Q9UP38 647 aa10.22□□□□□ -0.77
TPM3-203ENST00000312970 COL1A1P02452 1464 aaPredicted RBP10.22□□□□□ -0.77
TPM3-203ENST00000312970 FRAT2O75474 233 aaPredicted RBP10.21□□□□□ -0.77
TPM3-203ENST00000312970 USP2O75604 605 aaPredicted RBP10.21□□□□□ -0.77
TPM3-203ENST00000312970 IREB2P48200 963 aaKnown RBP10.21□□□□□ -0.77
TPM3-203ENST00000312970 TNFAIP1Q13829 316 aa10.21□□□□□ -0.77
TPM3-203ENST00000312970 RASA3Q14644 834 aa10.21□□□□□ -0.77
TPM3-203ENST00000312970 PKN2Q16513 984 aaKnown RBP10.21□□□□□ -0.77
TPM3-203ENST00000312970 NOM1Q5C9Z4 860 aaKnown RBP10.21□□□□□ -0.77
TPM3-203ENST00000312970 NBPF12Q5TAG4 269 aaPredicted RBP10.21□□□□□ -0.77
TPM3-203ENST00000312970 TRMT2AQ8IZ69 625 aaKnown RBP10.21□□□□□ -0.77
TPM3-203ENST00000312970 ZNF296Q8WUU4 475 aaPredicted RBP10.21□□□□□ -0.77
TPM3-203ENST00000312970 CDCA7LQ96GN5 454 aa10.21□□□□□ -0.77
TPM3-203ENST00000312970 TDRD3Q9H7E2 651 aaKnown RBP10.21□□□□□ -0.77
TPM3-203ENST00000312970 ZNF70Q9UC06 446 aaPredicted RBP10.21□□□□□ -0.77
TPM3-203ENST00000312970 LAMB1P07942 1786 aa10.21□□□□□ -0.78
TPM3-203ENST00000312970 MANSC4A6NHS7 340 aaPredicted RBP10.2□□□□□ -0.78
TPM3-203ENST00000312970 GPR25O00155 361 aa10.2□□□□□ -0.78
TPM3-203ENST00000312970 ALDH1A1P00352 501 aa10.2□□□□□ -0.78
TPM3-203ENST00000312970 ZBTB48P10074 688 aaPredicted RBP10.2□□□□□ -0.78
TPM3-203ENST00000312970 CRKP46108 304 aa10.2□□□□□ -0.78
TPM3-203ENST00000312970 AOX1Q06278 1338 aa10.2□□□□□ -0.78
TPM3-203ENST00000312970 SPDYE2Q495Y8 402 aa10.2□□□□□ -0.78
TPM3-203ENST00000312970 DZIP1LQ8IYY4 767 aaKnown RBP10.2□□□□□ -0.78
TPM3-203ENST00000312970 TBC1D22AQ8WUA7 517 aa10.2□□□□□ -0.78
TPM3-203ENST00000312970 MRIQ9BWK5 157 aa10.2□□□□□ -0.78
TPM3-203ENST00000312970 CFHR5Q9BXR6 569 aa10.2□□□□□ -0.78
TPM3-203ENST00000312970 SMC4Q9NTJ3 1288 aa10.2□□□□□ -0.78
TPM3-203ENST00000312970 IQSEC3Q9UPP2 1182 aaPredicted RBP10.2□□□□□ -0.78
TPM3-203ENST00000312970 RANBP2P49792 3224 aaKnown RBP10.2□□□□□ -0.78
TPM3-203ENST00000312970 KIAA0100Q14667 2235 aaKnown RBP10.19□□□□□ -0.78
TPM3-203ENST00000312970 IFIT1P09914 478 aaKnown RBP10.19□□□□□ -0.78
TPM3-203ENST00000312970 CT47B1P0C2W7 299 aaPredicted RBP10.19□□□□□ -0.78
TPM3-203ENST00000312970 TNNI2P48788 182 aa10.19□□□□□ -0.78
TPM3-203ENST00000312970 BCAMP50895 628 aa10.19□□□□□ -0.78
TPM3-203ENST00000312970 HDLBPQ00341 1268 aaKnown RBP10.19□□□□□ -0.78
TPM3-203ENST00000312970 CHAF1AQ13111 956 aaPredicted RBP10.19□□□□□ -0.78
TPM3-203ENST00000312970 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.19□□□□□ -0.78
TPM3-203ENST00000312970 ANKRD13AQ8IZ07 590 aa10.19□□□□□ -0.78
TPM3-203ENST00000312970 VGLL2Q8N8G2 317 aa10.19□□□□□ -0.78
TPM3-203ENST00000312970 KLHDC4Q8TBB5 520 aa10.19□□□□□ -0.78
TPM3-203ENST00000312970 GCC1Q96CN9 775 aa10.19□□□□□ -0.78
TPM3-203ENST00000312970 WNK4Q96J92 1243 aa10.19□□□□□ -0.78
TPM3-203ENST00000312970 CLMNQ96JQ2 1002 aa10.19□□□□□ -0.78
TPM3-203ENST00000312970 TCP10L2B9ZVM9 353 aa10.18□□□□□ -0.78
TPM3-203ENST00000312970 EYA2O00167 538 aa10.18□□□□□ -0.78
TPM3-203ENST00000312970 FKTNO75072 461 aa10.18□□□□□ -0.78
TPM3-203ENST00000312970 FGFR2P21802 821 aa10.18□□□□□ -0.78
TPM3-203ENST00000312970 RFX5P48382 616 aaPredicted RBP10.18□□□□□ -0.78
TPM3-203ENST00000312970 PUM3Q15397 648 aaKnown RBP10.18□□□□□ -0.78
TPM3-203ENST00000312970 OTUD7BQ6GQQ9 843 aa10.18□□□□□ -0.78
TPM3-203ENST00000312970 IFNL1Q8IU54 200 aa10.18□□□□□ -0.78
TPM3-203ENST00000312970 TEKT1Q969V4 418 aa10.18□□□□□ -0.78
TPM3-203ENST00000312970 NOB1Q9ULX3 412 aaKnown RBP10.18□□□□□ -0.78
TPM3-203ENST00000312970 HDAC5Q9UQL6 1122 aa10.18□□□□□ -0.78
TPM3-203ENST00000312970 SUGT1Q9Y2Z0 365 aa10.18□□□□□ -0.78
TPM3-203ENST00000312970 KIF16BQ96L93 1317 aa10.17□□□□□ -0.78
TPM3-203ENST00000312970 UBTFL1P0CB47 393 aaPredicted RBP10.17□□□□□ -0.78
TPM3-203ENST00000312970 GRIK5Q16478 980 aa10.17□□□□□ -0.78
TPM3-203ENST00000312970 LPIN2Q92539 896 aa10.17□□□□□ -0.78
TPM3-203ENST00000312970 TEPSINQ96N21 525 aa10.17□□□□□ -0.78
TPM3-203ENST00000312970 API5Q9BZZ5 524 aaKnown RBP10.17□□□□□ -0.78
TPM3-203ENST00000312970 R3HDMLQ9H3Y0 253 aa10.17□□□□□ -0.78
TPM3-203ENST00000312970 COL6A3P12111 3177 aa10.17□□□□□ -0.78
TPM3-203ENST00000312970 TRIOBPQ9H2D6 2365 aa10.17□□□□□ -0.78
TPM3-203ENST00000312970 SSC5DA1L4H1 1573 aa10.17□□□□□ -0.78
TPM3-203ENST00000312970 MAST3O60307 1309 aa10.16□□□□□ -0.78
TPM3-203ENST00000312970 CCER2I3L3R5 266 aa10.16□□□□□ -0.78
TPM3-203ENST00000312970 SLC5A1P13866 664 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms