RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 SPDYE6P0CI01 402 aa14.84□□□□□ -0.03
SCFD1-201ENST00000311943 SLURP2P0DP57 97 aa14.84□□□□□ -0.03
SCFD1-201ENST00000311943 GRM1Q13255 1194 aa14.84□□□□□ -0.03
SCFD1-201ENST00000311943 GORABQ5T7V8 394 aa14.84□□□□□ -0.03
SCFD1-201ENST00000311943 TSHZ3Q63HK5 1081 aa14.84□□□□□ -0.03
SCFD1-201ENST00000311943 CDC37L1Q7L3B6 337 aa14.84□□□□□ -0.03
SCFD1-201ENST00000311943 EDC3Q96F86 508 aaKnown RBP14.84□□□□□ -0.03
SCFD1-201ENST00000311943 ANTXR1Q9H6X2 564 aa14.84□□□□□ -0.03
SCFD1-201ENST00000311943 MYO5AQ9Y4I1 1855 aaKnown RBP14.84□□□□□ -0.03
SCFD1-201ENST00000311943 CHGBP05060 677 aa14.83□□□□□ -0.03
SCFD1-201ENST00000311943 ZC3H15Q8WU90 426 aaKnown RBP14.83□□□□□ -0.03
SCFD1-201ENST00000311943 VEZTQ9HBM0 779 aa14.83□□□□□ -0.03
SCFD1-201ENST00000311943 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.83□□□□□ -0.03
SCFD1-201ENST00000311943 ZAP70P43403 619 aa14.83□□□□□ -0.04
SCFD1-201ENST00000311943 SLFNL1Q499Z3 407 aa14.83□□□□□ -0.04
SCFD1-201ENST00000311943 SPATA5Q8NB90 893 aa14.83□□□□□ -0.04
SCFD1-201ENST00000311943 OTUD7AQ8TE49 926 aaPredicted RBP14.83□□□□□ -0.04
SCFD1-201ENST00000311943 CDCA5Q96FF9 252 aa14.83□□□□□ -0.04
SCFD1-201ENST00000311943 TMEM88BA6NKF7 163 aa14.82□□□□□ -0.04
SCFD1-201ENST00000311943 FKBP1AP62942 108 aaKnown RBP14.82□□□□□ -0.04
SCFD1-201ENST00000311943 APOBEC3HQ6NTF7 200 aaKnown RBP14.82□□□□□ -0.04
SCFD1-201ENST00000311943 HDAC9Q9UKV0 1011 aa14.82□□□□□ -0.04
SCFD1-201ENST00000311943 AKAP11Q9UKA4 1901 aa14.82□□□□□ -0.04
SCFD1-201ENST00000311943 TCP10L2B9ZVM9 353 aa14.82□□□□□ -0.04
SCFD1-201ENST00000311943 CYP2E1P05181 493 aaPredicted RBP14.82□□□□□ -0.04
SCFD1-201ENST00000311943 ARID4AP29374 1257 aaPredicted RBP14.82□□□□□ -0.04
SCFD1-201ENST00000311943 SULF1Q8IWU6 871 aa14.82□□□□□ -0.04
SCFD1-201ENST00000311943 PIH1D3Q9NQM4 214 aaKnown RBP14.82□□□□□ -0.04
SCFD1-201ENST00000311943 ABT1Q9ULW3 272 aaKnown RBP14.82□□□□□ -0.04
SCFD1-201ENST00000311943 IGHDP01880 384 aa14.81□□□□□ -0.04
SCFD1-201ENST00000311943 TTC39AQ5SRH9 613 aa14.81□□□□□ -0.04
SCFD1-201ENST00000311943 ZIC5Q96T25 663 aa14.81□□□□□ -0.04
SCFD1-201ENST00000311943 GPR108Q9NPR9 543 aa14.81□□□□□ -0.04
SCFD1-201ENST00000311943 ZNF70Q9UC06 446 aaPredicted RBP14.81□□□□□ -0.04
SCFD1-201ENST00000311943 DENND2AQ9ULE3 1009 aa14.81□□□□□ -0.04
SCFD1-201ENST00000311943 DAGLAQ9Y4D2 1042 aa14.81□□□□□ -0.04
SCFD1-201ENST00000311943 CYP4F22Q6NT55 531 aa14.8□□□□□ -0.04
SCFD1-201ENST00000311943 ADGRA1Q86SQ6 560 aa14.8□□□□□ -0.04
SCFD1-201ENST00000311943 WDR66Q8TBY9 1149 aa14.8□□□□□ -0.04
SCFD1-201ENST00000311943 CREBZFQ9NS37 354 aa14.8□□□□□ -0.04
SCFD1-201ENST00000311943 GNL3LQ9NVN8 582 aaKnown RBP14.8□□□□□ -0.04
SCFD1-201ENST00000311943 HMMRO75330 724 aa14.8□□□□□ -0.04
SCFD1-201ENST00000311943 LDHBP07195 334 aaKnown RBP14.8□□□□□ -0.04
SCFD1-201ENST00000311943 MECOMQ03112 1051 aa14.8□□□□□ -0.04
SCFD1-201ENST00000311943 NFIAQ12857 509 aa14.8□□□□□ -0.04
SCFD1-201ENST00000311943 ZFPM1Q8IX07 1006 aa14.8□□□□□ -0.04
SCFD1-201ENST00000311943 KIF1BPQ96EK5 621 aa14.8□□□□□ -0.04
SCFD1-201ENST00000311943 TMEM39BQ9GZU3 492 aa14.8□□□□□ -0.04
SCFD1-201ENST00000311943 DEFB129Q9H1M3 183 aa14.8□□□□□ -0.04
SCFD1-201ENST00000311943 DCTPP1Q9H773 170 aa14.8□□□□□ -0.04
SCFD1-201ENST00000311943 NBPF12Q5TAG4 269 aaPredicted RBP14.79□□□□□ -0.04
SCFD1-201ENST00000311943 SAPCD2Q86UD0 394 aa14.79□□□□□ -0.04
SCFD1-201ENST00000311943 TBC1D22AQ8WUA7 517 aa14.79□□□□□ -0.04
SCFD1-201ENST00000311943 SERPINA10Q9UK55 444 aa14.79□□□□□ -0.04
SCFD1-201ENST00000311943 SSC5DA1L4H1 1573 aa14.79□□□□□ -0.04
SCFD1-201ENST00000311943 VEGFBP49765 207 aa14.78□□□□□ -0.04
SCFD1-201ENST00000311943 RASA3Q14644 834 aa14.78□□□□□ -0.04
SCFD1-201ENST00000311943 MTMR14Q8NCE2 650 aa14.78□□□□□ -0.04
SCFD1-201ENST00000311943 TEKT1Q969V4 418 aa14.78□□□□□ -0.04
SCFD1-201ENST00000311943 TRPM7Q96QT4 1865 aa14.78□□□□□ -0.04
SCFD1-201ENST00000311943 UBE2Q2LH0YL09 131 aa14.78□□□□□ -0.04
SCFD1-201ENST00000311943 TCP10Q12799 353 aa14.78□□□□□ -0.04
SCFD1-201ENST00000311943 SPDYE2Q495Y8 402 aa14.78□□□□□ -0.04
SCFD1-201ENST00000311943 CCDC158Q5M9N0 1113 aa14.78□□□□□ -0.04
SCFD1-201ENST00000311943 PAXIP1Q6ZW49 1069 aaPredicted RBP14.78□□□□□ -0.04
SCFD1-201ENST00000311943 AOC2O75106 756 aa14.77□□□□□ -0.04
SCFD1-201ENST00000311943 CNTNAP1P78357 1384 aa14.77□□□□□ -0.04
SCFD1-201ENST00000311943 CDC42EP5Q6NZY7 148 aa14.77□□□□□ -0.04
SCFD1-201ENST00000311943 ERC1Q8IUD2 1116 aa14.77□□□□□ -0.04
SCFD1-201ENST00000311943 CLASRPQ8N2M8 674 aaKnown RBP14.77□□□□□ -0.04
SCFD1-201ENST00000311943 KLRG1Q96E93 195 aa14.77□□□□□ -0.04
SCFD1-201ENST00000311943 ZDHHC15Q96MV8 337 aa14.77□□□□□ -0.04
SCFD1-201ENST00000311943 LRRCC1Q9C099 1032 aa14.77□□□□□ -0.04
SCFD1-201ENST00000311943 BOLA2Q9H3K6 86 aa14.77□□□□□ -0.04
SCFD1-201ENST00000311943 RAI14Q9P0K7 980 aa14.77□□□□□ -0.04
SCFD1-201ENST00000311943 SALL1Q9NSC2 1324 aa14.77□□□□□ -0.05
SCFD1-201ENST00000311943 SEMA3EO15041 775 aa14.76□□□□□ -0.05
SCFD1-201ENST00000311943 B4GALNT3Q6L9W6 998 aa14.76□□□□□ -0.05
SCFD1-201ENST00000311943 NSUN4Q96CB9 384 aaKnown RBP14.76□□□□□ -0.05
SCFD1-201ENST00000311943 MYH2Q9UKX2 1941 aa14.76□□□□□ -0.05
SCFD1-201ENST00000311943 IFIT2P09913 472 aaKnown RBP14.76□□□□□ -0.05
SCFD1-201ENST00000311943 DZIP1Q86YF9 867 aaKnown RBP14.76□□□□□ -0.05
SCFD1-201ENST00000311943 TEPSINQ96N21 525 aa14.76□□□□□ -0.05
SCFD1-201ENST00000311943 DNAJC2Q99543 621 aaKnown RBP14.76□□□□□ -0.05
SCFD1-201ENST00000311943 GBA2Q9HCG7 927 aaPredicted RBP14.76□□□□□ -0.05
SCFD1-201ENST00000311943 TLL2Q9Y6L7 1015 aa14.76□□□□□ -0.05
SCFD1-201ENST00000311943 PITPNM2Q9BZ72 1349 aa14.75□□□□□ -0.05
SCFD1-201ENST00000311943 MAP4K4O95819 1239 aaPredicted RBP14.75□□□□□ -0.05
SCFD1-201ENST00000311943 HUNKP57058 714 aa14.75□□□□□ -0.05
SCFD1-201ENST00000311943 DEFB115Q30KQ5 88 aa14.75□□□□□ -0.05
SCFD1-201ENST00000311943 CHMP4BQ9H444 224 aaKnown RBP14.75□□□□□ -0.05
SCFD1-201ENST00000311943 DDX4Q9NQI0 724 aaKnown RBP14.75□□□□□ -0.05
SCFD1-201ENST00000311943 LRP2BPQ9P2M1 347 aa14.75□□□□□ -0.05
SCFD1-201ENST00000311943 ECM29Q5VYK3 1845 aa14.75□□□□□ -0.05
SCFD1-201ENST00000311943 RAB11FIP3O75154 756 aa14.75□□□□□ -0.05
SCFD1-201ENST00000311943 UQCRFS1P1P0C7P4 283 aa14.75□□□□□ -0.05
SCFD1-201ENST00000311943 MKRN3Q13064 507 aaKnown RBP14.75□□□□□ -0.05
SCFD1-201ENST00000311943 HSP90AB4PQ58FF6 505 aa14.75□□□□□ -0.05
SCFD1-201ENST00000311943 ERICH6Q7L0X2 663 aa14.75□□□□□ -0.05
SCFD1-201ENST00000311943 FAM198AQ9UFP1 575 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms