RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 TCIRG1Q13488 830 aa11.08□□□□□ -0.64
RBFOX1-201ENST00000311745 LRSAM1Q6UWE0 723 aa11.08□□□□□ -0.64
RBFOX1-201ENST00000311745 SH3TC1Q8TE82 1336 aa11.07□□□□□ -0.64
RBFOX1-201ENST00000311745 TAF1P21675 1872 aa11.07□□□□□ -0.64
RBFOX1-201ENST00000311745 CIAO1O76071 339 aa11.07□□□□□ -0.64
RBFOX1-201ENST00000311745 ECM2O94769 699 aaPredicted RBP11.07□□□□□ -0.64
RBFOX1-201ENST00000311745 ARMC3Q5W041 872 aa11.07□□□□□ -0.64
RBFOX1-201ENST00000311745 ZNF397Q8NF99 534 aaPredicted RBP11.07□□□□□ -0.64
RBFOX1-201ENST00000311745 GPATCH3Q96I76 525 aa11.07□□□□□ -0.64
RBFOX1-201ENST00000311745 PAIP2Q9BPZ3 127 aaKnown RBP11.07□□□□□ -0.64
RBFOX1-201ENST00000311745 SYT1P21579 422 aa11.07□□□□□ -0.64
RBFOX1-201ENST00000311745 TIMM10P62072 90 aa11.07□□□□□ -0.64
RBFOX1-201ENST00000311745 SRLQ86TD4 932 aa11.07□□□□□ -0.64
RBFOX1-201ENST00000311745 PYCARDQ9ULZ3 195 aa11.07□□□□□ -0.64
RBFOX1-201ENST00000311745 GPS2Q13227 327 aa11.06□□□□□ -0.64
RBFOX1-201ENST00000311745 MCTP2Q6DN12 878 aa11.06□□□□□ -0.64
RBFOX1-201ENST00000311745 MTMR6Q9Y217 621 aa11.06□□□□□ -0.64
RBFOX1-201ENST00000311745 IBSPP21815 317 aaPredicted RBP11.06□□□□□ -0.64
RBFOX1-201ENST00000311745 MAP9Q49MG5 647 aa11.06□□□□□ -0.64
RBFOX1-201ENST00000311745 DNAJC14Q6Y2X3 702 aaPredicted RBP11.06□□□□□ -0.64
RBFOX1-201ENST00000311745 VGLL2Q8N8G2 317 aa11.06□□□□□ -0.64
RBFOX1-201ENST00000311745 RUFY2Q8WXA3 655 aa11.06□□□□□ -0.64
RBFOX1-201ENST00000311745 ITFG2Q969R8 447 aa11.06□□□□□ -0.64
RBFOX1-201ENST00000311745 PDRG1Q9NUG6 133 aa11.06□□□□□ -0.64
RBFOX1-201ENST00000311745 CHD4Q14839 1912 aa11.06□□□□□ -0.64
RBFOX1-201ENST00000311745 UBN2Q6ZU65 1347 aa11.06□□□□□ -0.64
RBFOX1-201ENST00000311745 BCL9LQ86UU0 1499 aa11.06□□□□□ -0.64
RBFOX1-201ENST00000311745 RPS6KB1P23443 525 aa11.06□□□□□ -0.64
RBFOX1-201ENST00000311745 ST5P78524 1137 aa11.06□□□□□ -0.64
RBFOX1-201ENST00000311745 ZC3H12AQ5D1E8 599 aaKnown RBP11.06□□□□□ -0.64
RBFOX1-201ENST00000311745 FSD1Q9BTV5 496 aa11.06□□□□□ -0.64
RBFOX1-201ENST00000311745 NUCKS1Q9H1E3 243 aaKnown RBP11.06□□□□□ -0.64
RBFOX1-201ENST00000311745 EYA2O00167 538 aa11.05□□□□□ -0.64
RBFOX1-201ENST00000311745 ADCY5O95622 1261 aa11.05□□□□□ -0.64
RBFOX1-201ENST00000311745 CYP21A2P08686 494 aa11.05□□□□□ -0.64
RBFOX1-201ENST00000311745 RBM6P78332 1123 aaKnown RBP11.05□□□□□ -0.64
RBFOX1-201ENST00000311745 SCARF1Q14162 830 aa11.05□□□□□ -0.64
RBFOX1-201ENST00000311745 GDPD2Q9HCC8 539 aa11.05□□□□□ -0.64
RBFOX1-201ENST00000311745 TMOD3Q9NYL9 352 aa11.05□□□□□ -0.64
RBFOX1-201ENST00000311745 SCN7AQ01118 1682 aa11.05□□□□□ -0.64
RBFOX1-201ENST00000311745 HIP1O00291 1037 aa11.05□□□□□ -0.64
RBFOX1-201ENST00000311745 LIG1P18858 919 aa11.05□□□□□ -0.64
RBFOX1-201ENST00000311745 ADORA1P30542 326 aa11.05□□□□□ -0.64
RBFOX1-201ENST00000311745 DDX46Q7L014 1031 aaKnown RBP11.05□□□□□ -0.64
RBFOX1-201ENST00000311745 USP48Q86UV5 1035 aa11.05□□□□□ -0.64
RBFOX1-201ENST00000311745 NECAB1Q8N987 351 aa11.05□□□□□ -0.64
RBFOX1-201ENST00000311745 JMYQ8N9B5 988 aa11.05□□□□□ -0.64
RBFOX1-201ENST00000311745 KBTBD3Q8NAB2 608 aa11.05□□□□□ -0.64
RBFOX1-201ENST00000311745 NKX2-3Q8TAU0 364 aa11.05□□□□□ -0.64
RBFOX1-201ENST00000311745 TCEANC2Q96MN5 208 aa11.05□□□□□ -0.64
RBFOX1-201ENST00000311745 MAP3K15Q6ZN16 1313 aa11.05□□□□□ -0.64
RBFOX1-201ENST00000311745 PCCAP05165 728 aaPredicted RBP11.04□□□□□ -0.64
RBFOX1-201ENST00000311745 ZSCAN22P10073 491 aaPredicted RBP11.04□□□□□ -0.64
RBFOX1-201ENST00000311745 PDE6BP35913 854 aa11.04□□□□□ -0.64
RBFOX1-201ENST00000311745 SKIDA1Q1XH10 827 aa11.04□□□□□ -0.64
RBFOX1-201ENST00000311745 CCDC83Q8IWF9 413 aa11.04□□□□□ -0.64
RBFOX1-201ENST00000311745 CCDC97Q96F63 343 aaPredicted RBP11.04□□□□□ -0.64
RBFOX1-201ENST00000311745 TSPY26PQ9H489 355 aa11.04□□□□□ -0.64
RBFOX1-201ENST00000311745 CDHR2Q9BYE9 1310 aa11.04□□□□□ -0.64
RBFOX1-201ENST00000311745 COL24A1Q17RW2 1714 aa11.04□□□□□ -0.64
RBFOX1-201ENST00000311745 FBXO38Q6PIJ6 1188 aa11.04□□□□□ -0.64
RBFOX1-201ENST00000311745 SPTLC3Q9NUV7 552 aa11.04□□□□□ -0.64
RBFOX1-201ENST00000311745 M0R2C6 588 aa11.04□□□□□ -0.64
RBFOX1-201ENST00000311745 IPO7O95373 1038 aaKnown RBP11.04□□□□□ -0.64
RBFOX1-201ENST00000311745 ZMYM1Q5SVZ6 1142 aa11.04□□□□□ -0.64
RBFOX1-201ENST00000311745 CREBRFQ8IUR6 639 aa11.04□□□□□ -0.64
RBFOX1-201ENST00000311745 SMARCE1Q969G3 411 aa11.04□□□□□ -0.64
RBFOX1-201ENST00000311745 CNPY2Q9Y2B0 182 aa11.04□□□□□ -0.64
RBFOX1-201ENST00000311745 RIPOR2Q9Y4F9 1068 aa11.04□□□□□ -0.64
RBFOX1-201ENST00000311745 GJB2P29033 226 aa11.03□□□□□ -0.64
RBFOX1-201ENST00000311745 IL15P40933 162 aaPredicted RBP11.03□□□□□ -0.64
RBFOX1-201ENST00000311745 LMAN1P49257 510 aa11.03□□□□□ -0.64
RBFOX1-201ENST00000311745 ELF2Q15723 593 aa11.03□□□□□ -0.64
RBFOX1-201ENST00000311745 NLRP10Q86W26 655 aa11.03□□□□□ -0.64
RBFOX1-201ENST00000311745 ZBTB38Q8NAP3 1195 aaPredicted RBP11.03□□□□□ -0.64
RBFOX1-201ENST00000311745 GIMAP7Q8NHV1 300 aa11.03□□□□□ -0.64
RBFOX1-201ENST00000311745 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.03□□□□□ -0.64
RBFOX1-201ENST00000311745 FAM89AQ96GI7 184 aa11.03□□□□□ -0.64
RBFOX1-201ENST00000311745 CPSF2Q9P2I0 782 aaKnown RBP11.03□□□□□ -0.64
RBFOX1-201ENST00000311745 CYP46A1Q9Y6A2 500 aa11.03□□□□□ -0.64
RBFOX1-201ENST00000311745 STX6O43752 255 aa11.03□□□□□ -0.64
RBFOX1-201ENST00000311745 F13A1P00488 732 aa11.03□□□□□ -0.64
RBFOX1-201ENST00000311745 PSMD2Q13200 908 aa11.03□□□□□ -0.64
RBFOX1-201ENST00000311745 MUM1L1Q5H9M0 696 aa11.03□□□□□ -0.64
RBFOX1-201ENST00000311745 GIGYF2Q6Y7W6 1299 aaKnown RBP11.03□□□□□ -0.64
RBFOX1-201ENST00000311745 ZBTB1Q9Y2K1 713 aa11.03□□□□□ -0.64
RBFOX1-201ENST00000311745 MAST3O60307 1309 aa11.03□□□□□ -0.64
RBFOX1-201ENST00000311745 TIAM2Q8IVF5 1701 aa11.03□□□□□ -0.64
RBFOX1-201ENST00000311745 GSCP56915 257 aaPredicted RBP11.03□□□□□ -0.64
RBFOX1-201ENST00000311745 SF3A1Q15459 793 aaKnown RBP11.03□□□□□ -0.64
RBFOX1-201ENST00000311745 MFSD4BQ5TF39 518 aa11.03□□□□□ -0.64
RBFOX1-201ENST00000311745 INTS5Q6P9B9 1019 aaKnown RBP11.03□□□□□ -0.64
RBFOX1-201ENST00000311745 AGXT2Q9BYV1 514 aa11.03□□□□□ -0.64
RBFOX1-201ENST00000311745 ZCCHC17Q9NP64 241 aaKnown RBP11.03□□□□□ -0.64
RBFOX1-201ENST00000311745 RPS6KL1Q9Y6S9 549 aa11.03□□□□□ -0.64
RBFOX1-201ENST00000311745 EVA1CP58658 441 aa11.02□□□□□ -0.65
RBFOX1-201ENST00000311745 FOXD4L6Q3SYB3 417 aaPredicted RBP11.02□□□□□ -0.65
RBFOX1-201ENST00000311745 FOXD4L3Q6VB84 417 aaPredicted RBP11.02□□□□□ -0.65
RBFOX1-201ENST00000311745 PAG1Q9NWQ8 432 aa11.02□□□□□ -0.65
RBFOX1-201ENST00000311745 SPATA31A1Q5TZJ5 1347 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms