RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 A0A0G2JLW4 131 aa13.19□□□□□ -0.3
TRIM59-201ENST00000309784 PSDA5PKW4 1024 aaPredicted RBP13.19□□□□□ -0.3
TRIM59-201ENST00000309784 SEMA3EO15041 775 aa13.19□□□□□ -0.3
TRIM59-201ENST00000309784 TPRNQ4KMQ1 711 aa13.19□□□□□ -0.3
TRIM59-201ENST00000309784 SP8Q8IXZ3 490 aa13.19□□□□□ -0.3
TRIM59-201ENST00000309784 CNKSR1Q969H4 720 aa13.19□□□□□ -0.3
TRIM59-201ENST00000309784 TMC4Q7Z404 712 aa13.18□□□□□ -0.3
TRIM59-201ENST00000309784 NECAB1Q8N987 351 aa13.18□□□□□ -0.3
TRIM59-201ENST00000309784 BRF1Q92994 677 aa13.18□□□□□ -0.3
TRIM59-201ENST00000309784 POLLQ9UGP5 575 aa13.18□□□□□ -0.3
TRIM59-201ENST00000309784 ATP6V0A2Q9Y487 856 aa13.18□□□□□ -0.3
TRIM59-201ENST00000309784 HOXA10P31260 410 aaPredicted RBP13.18□□□□□ -0.3
TRIM59-201ENST00000309784 DYNLL1P63167 89 aaKnown RBP13.18□□□□□ -0.3
TRIM59-201ENST00000309784 ANKRD1Q15327 319 aa13.18□□□□□ -0.3
TRIM59-201ENST00000309784 MFSD14BQ5SR56 506 aa13.18□□□□□ -0.3
TRIM59-201ENST00000309784 CD209Q9NNX6 404 aa13.18□□□□□ -0.3
TRIM59-201ENST00000309784 NFKBIBQ15653 356 aa13.18□□□□□ -0.3
TRIM59-201ENST00000309784 Q6ZUG5 572 aa13.18□□□□□ -0.3
TRIM59-201ENST00000309784 EYA3Q99504 573 aa13.18□□□□□ -0.3
TRIM59-201ENST00000309784 E7EWF7 191 aa13.17□□□□□ -0.3
TRIM59-201ENST00000309784 RPS6KB1P23443 525 aa13.17□□□□□ -0.3
TRIM59-201ENST00000309784 USP5P45974 858 aa13.17□□□□□ -0.3
TRIM59-201ENST00000309784 MECOMQ03112 1051 aa13.17□□□□□ -0.3
TRIM59-201ENST00000309784 ZSWIM6Q9HCJ5 1215 aa13.17□□□□□ -0.3
TRIM59-201ENST00000309784 STRBPQ96SI9 672 aaKnown RBP13.17□□□□□ -0.3
TRIM59-201ENST00000309784 DBNDD1Q9H9R9 158 aa13.17□□□□□ -0.3
TRIM59-201ENST00000309784 C21orf2O43822 256 aa13.17□□□□□ -0.3
TRIM59-201ENST00000309784 HMGB1P09429 215 aaKnown RBP13.17□□□□□ -0.3
TRIM59-201ENST00000309784 DIXDC1Q155Q3 683 aa13.17□□□□□ -0.3
TRIM59-201ENST00000309784 NFXL1Q6ZNB6 911 aa13.17□□□□□ -0.3
TRIM59-201ENST00000309784 IFNL3Q8IZI9 196 aa13.17□□□□□ -0.3
TRIM59-201ENST00000309784 NCOA7Q8NI08 942 aa13.17□□□□□ -0.3
TRIM59-201ENST00000309784 TM6SF1Q9BZW5 370 aa13.17□□□□□ -0.3
TRIM59-201ENST00000309784 RBM5P52756 815 aaKnown RBP eCLIP13.16□□□□□ -0.3
TRIM59-201ENST00000309784 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.16□□□□□ -0.3
TRIM59-201ENST00000309784 PATL2C9JE40 543 aaKnown RBP13.16□□□□□ -0.3
TRIM59-201ENST00000309784 GNAT2P19087 354 aa13.16□□□□□ -0.3
TRIM59-201ENST00000309784 CTDSPL2Q05D32 466 aa13.16□□□□□ -0.3
TRIM59-201ENST00000309784 RAB11FIP4Q86YS3 637 aa13.16□□□□□ -0.3
TRIM59-201ENST00000309784 CRNKL1Q9BZJ0 848 aaKnown RBP13.16□□□□□ -0.3
TRIM59-201ENST00000309784 COL4A1P02462 1669 aa13.16□□□□□ -0.3
TRIM59-201ENST00000309784 PPFIA3O75145 1194 aa13.16□□□□□ -0.3
TRIM59-201ENST00000309784 ZSCAN31Q96LW9 406 aaPredicted RBP13.16□□□□□ -0.3
TRIM59-201ENST00000309784 DHX32Q7L7V1 743 aaKnown RBP13.15□□□□□ -0.3
TRIM59-201ENST00000309784 TICAM2Q86XR7 235 aa13.15□□□□□ -0.3
TRIM59-201ENST00000309784 AMOTL1Q8IY63 956 aa13.15□□□□□ -0.3
TRIM59-201ENST00000309784 LDHCP07864 332 aa13.15□□□□□ -0.3
TRIM59-201ENST00000309784 FOSBP53539 338 aa13.15□□□□□ -0.3
TRIM59-201ENST00000309784 BAG3O95817 575 aa13.15□□□□□ -0.3
TRIM59-201ENST00000309784 CCT2P78371 535 aaKnown RBP13.15□□□□□ -0.3
TRIM59-201ENST00000309784 CCDC125Q86Z20 511 aa13.15□□□□□ -0.3
TRIM59-201ENST00000309784 GOLGA6L22H0YM25 854 aa13.14□□□□□ -0.31
TRIM59-201ENST00000309784 GSTO1P78417 241 aa13.14□□□□□ -0.31
TRIM59-201ENST00000309784 MFSD6Q6ZSS7 791 aa13.14□□□□□ -0.31
TRIM59-201ENST00000309784 STOX1Q6ZVD7 989 aa13.14□□□□□ -0.31
TRIM59-201ENST00000309784 GBP4Q96PP9 640 aa13.14□□□□□ -0.31
TRIM59-201ENST00000309784 CWC22Q9HCG8 908 aaKnown RBP13.14□□□□□ -0.31
TRIM59-201ENST00000309784 TNRC6CQ9HCJ0 1690 aaKnown RBP13.14□□□□□ -0.31
TRIM59-201ENST00000309784 VPS37CA5D8V6 355 aaPredicted RBP13.14□□□□□ -0.31
TRIM59-201ENST00000309784 B4E1Z4 1266 aa13.14□□□□□ -0.31
TRIM59-201ENST00000309784 PRC1O43663 620 aa13.14□□□□□ -0.31
TRIM59-201ENST00000309784 MCM5P33992 734 aa13.14□□□□□ -0.31
TRIM59-201ENST00000309784 NUCB2P80303 420 aa13.14□□□□□ -0.31
TRIM59-201ENST00000309784 ADGRA1Q86SQ6 560 aa13.14□□□□□ -0.31
TRIM59-201ENST00000309784 ERICH2A1L162 156 aa13.14□□□□□ -0.31
TRIM59-201ENST00000309784 APOBRQ0VD83 1088 aa13.14□□□□□ -0.31
TRIM59-201ENST00000309784 TDRD7Q8NHU6 1098 aaKnown RBP13.14□□□□□ -0.31
TRIM59-201ENST00000309784 NSUN4Q96CB9 384 aaKnown RBP13.14□□□□□ -0.31
TRIM59-201ENST00000309784 SH2B1Q9NRF2 756 aaPredicted RBP13.14□□□□□ -0.31
TRIM59-201ENST00000309784 TCRBV5S4A2TA0A5A2 114 aa13.14□□□□□ -0.31
TRIM59-201ENST00000309784 COL9A3Q14050 684 aaPredicted RBP13.14□□□□□ -0.31
TRIM59-201ENST00000309784 TTLL6Q8N841 843 aa13.14□□□□□ -0.31
TRIM59-201ENST00000309784 FAM184AQ8NB25 1140 aa13.14□□□□□ -0.31
TRIM59-201ENST00000309784 SLC16A10Q8TF71 515 aa13.14□□□□□ -0.31
TRIM59-201ENST00000309784 PPIP5K2O43314 1243 aa13.13□□□□□ -0.31
TRIM59-201ENST00000309784 RANBP6O60518 1105 aaKnown RBP13.13□□□□□ -0.31
TRIM59-201ENST00000309784 KDM4AO75164 1064 aa13.13□□□□□ -0.31
TRIM59-201ENST00000309784 LARGE1O95461 756 aa13.13□□□□□ -0.31
TRIM59-201ENST00000309784 NCLP19338 710 aaKnown RBP13.13□□□□□ -0.31
TRIM59-201ENST00000309784 MCM9Q9NXL9 1143 aa13.13□□□□□ -0.31
TRIM59-201ENST00000309784 CPLX1O14810 134 aa13.13□□□□□ -0.31
TRIM59-201ENST00000309784 ME3Q16798 604 aa13.13□□□□□ -0.31
TRIM59-201ENST00000309784 DDX11Q96FC9 970 aa13.13□□□□□ -0.31
TRIM59-201ENST00000309784 TTC14Q96N46 770 aa13.13□□□□□ -0.31
TRIM59-201ENST00000309784 INCENPQ9NQS7 918 aa13.13□□□□□ -0.31
TRIM59-201ENST00000309784 TPCN1Q9ULQ1 816 aa13.13□□□□□ -0.31
TRIM59-201ENST00000309784 PRDM1O75626 825 aa13.13□□□□□ -0.31
TRIM59-201ENST00000309784 COA1Q9GZY4 146 aa13.13□□□□□ -0.31
TRIM59-201ENST00000309784 CIZ1Q9ULV3 898 aaPredicted RBP13.13□□□□□ -0.31
TRIM59-201ENST00000309784 LAMB2P55268 1798 aa13.12□□□□□ -0.31
TRIM59-201ENST00000309784 TUBGCP6Q96RT7 1819 aa13.12□□□□□ -0.31
TRIM59-201ENST00000309784 POLR3DP05423 398 aaPredicted RBP13.12□□□□□ -0.31
TRIM59-201ENST00000309784 DPEP1P16444 411 aa13.12□□□□□ -0.31
TRIM59-201ENST00000309784 SCNN1DP51172 638 aa13.12□□□□□ -0.31
TRIM59-201ENST00000309784 STYK1Q6J9G0 422 aa13.12□□□□□ -0.31
TRIM59-201ENST00000309784 SLF2Q8IX21 1173 aa13.12□□□□□ -0.31
TRIM59-201ENST00000309784 TBC1D22AQ8WUA7 517 aa13.12□□□□□ -0.31
TRIM59-201ENST00000309784 COL24A1Q17RW2 1714 aa13.12□□□□□ -0.31
TRIM59-201ENST00000309784 LRP5O75197 1615 aa13.12□□□□□ -0.31
TRIM59-201ENST00000309784 CYP2D7A0A087X1C5 515 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms