RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 IL6STP40189 918 aaPredicted RBP13.09□□□□□ -0.31
PCDHGC3-201ENST00000308177 PKP1Q13835 747 aa13.09□□□□□ -0.31
PCDHGC3-201ENST00000308177 CPLX3Q8WVH0 158 aa13.09□□□□□ -0.31
PCDHGC3-201ENST00000308177 ZNF830Q96NB3 372 aaPredicted RBP13.09□□□□□ -0.31
PCDHGC3-201ENST00000308177 SYCP1Q15431 976 aa13.09□□□□□ -0.31
PCDHGC3-201ENST00000308177 FKBP15Q5T1M5 1219 aa13.09□□□□□ -0.31
PCDHGC3-201ENST00000308177 CCDC186Q7Z3E2 898 aa13.09□□□□□ -0.31
PCDHGC3-201ENST00000308177 AOPEPQ8N6M6 819 aa13.09□□□□□ -0.31
PCDHGC3-201ENST00000308177 RBSNQ9H1K0 784 aa13.09□□□□□ -0.31
PCDHGC3-201ENST00000308177 VWDEQ8N2E2 1590 aa13.09□□□□□ -0.31
PCDHGC3-201ENST00000308177 MYO3AQ8NEV4 1616 aa13.09□□□□□ -0.31
PCDHGC3-201ENST00000308177 PTPN12Q05209 780 aaKnown RBP13.09□□□□□ -0.31
PCDHGC3-201ENST00000308177 ZNF397Q8NF99 534 aaPredicted RBP13.09□□□□□ -0.31
PCDHGC3-201ENST00000308177 ERCC4Q92889 916 aaPredicted RBP13.09□□□□□ -0.31
PCDHGC3-201ENST00000308177 GTF3C6Q969F1 213 aa13.09□□□□□ -0.31
PCDHGC3-201ENST00000308177 CIAO1O76071 339 aa13.08□□□□□ -0.31
PCDHGC3-201ENST00000308177 CLCN1P35523 988 aa13.08□□□□□ -0.31
PCDHGC3-201ENST00000308177 ZNF445P59923 1031 aa13.08□□□□□ -0.31
PCDHGC3-201ENST00000308177 RPS8P62241 208 aaKnown RBP13.08□□□□□ -0.31
PCDHGC3-201ENST00000308177 OTUD7BQ6GQQ9 843 aa13.08□□□□□ -0.31
PCDHGC3-201ENST00000308177 RIMBP2O15034 1052 aa13.08□□□□□ -0.32
PCDHGC3-201ENST00000308177 GADD45BO75293 160 aaPredicted RBP13.08□□□□□ -0.32
PCDHGC3-201ENST00000308177 PRDM1O75626 825 aa13.08□□□□□ -0.32
PCDHGC3-201ENST00000308177 UFL1O94874 794 aa13.08□□□□□ -0.32
PCDHGC3-201ENST00000308177 SASH1O94885 1247 aa13.08□□□□□ -0.32
PCDHGC3-201ENST00000308177 KRT2P35908 639 aa13.08□□□□□ -0.32
PCDHGC3-201ENST00000308177 TSG101Q99816 390 aa13.08□□□□□ -0.32
PCDHGC3-201ENST00000308177 TPCN1Q9ULQ1 816 aa13.08□□□□□ -0.32
PCDHGC3-201ENST00000308177 ZKSCAN5Q9Y2L8 839 aa13.08□□□□□ -0.32
PCDHGC3-201ENST00000308177 A0A1B0GVL5 298 aa13.08□□□□□ -0.32
PCDHGC3-201ENST00000308177 NAPAP54920 295 aa13.08□□□□□ -0.32
PCDHGC3-201ENST00000308177 FAM160A1Q05DH4 1040 aa13.08□□□□□ -0.32
PCDHGC3-201ENST00000308177 KIAA1328Q86T90 577 aa13.08□□□□□ -0.32
PCDHGC3-201ENST00000308177 RBM17Q96I25 401 aaKnown RBP13.08□□□□□ -0.32
PCDHGC3-201ENST00000308177 OVOS2A0A0J9YW53 1432 aa13.08□□□□□ -0.32
PCDHGC3-201ENST00000308177 RGS12O14924 1447 aa13.08□□□□□ -0.32
PCDHGC3-201ENST00000308177 OVOS2Q6IE36 1432 aa13.08□□□□□ -0.32
PCDHGC3-201ENST00000308177 CPS1P31327 1500 aa13.08□□□□□ -0.32
PCDHGC3-201ENST00000308177 LEO1Q8WVC0 666 aaPredicted RBP13.08□□□□□ -0.32
PCDHGC3-201ENST00000308177 PARP3Q9Y6F1 533 aa13.08□□□□□ -0.32
PCDHGC3-201ENST00000308177 PDE8BO95263 885 aa13.07□□□□□ -0.32
PCDHGC3-201ENST00000308177 FGFR1OPO95684 399 aaKnown RBP13.07□□□□□ -0.32
PCDHGC3-201ENST00000308177 UBASH3AP57075 661 aa13.07□□□□□ -0.32
PCDHGC3-201ENST00000308177 ADCK5Q3MIX3 580 aa13.07□□□□□ -0.32
PCDHGC3-201ENST00000308177 RBM28Q9NW13 759 aaKnown RBP13.07□□□□□ -0.32
PCDHGC3-201ENST00000308177 IGKV5-2P06315 115 aa13.07□□□□□ -0.32
PCDHGC3-201ENST00000308177 CTDSPL2Q05D32 466 aa13.07□□□□□ -0.32
PCDHGC3-201ENST00000308177 PPP4R3BQ5MIZ7 849 aa13.07□□□□□ -0.32
PCDHGC3-201ENST00000308177 UBXN4Q92575 508 aa13.07□□□□□ -0.32
PCDHGC3-201ENST00000308177 PDE6AP16499 860 aa13.07□□□□□ -0.32
PCDHGC3-201ENST00000308177 TNIP1Q15025 636 aa13.07□□□□□ -0.32
PCDHGC3-201ENST00000308177 TMEM132AQ24JP5 1023 aa13.07□□□□□ -0.32
PCDHGC3-201ENST00000308177 WDR66Q8TBY9 1149 aa13.07□□□□□ -0.32
PCDHGC3-201ENST00000308177 PI4K2BQ8TCG2 481 aa13.07□□□□□ -0.32
PCDHGC3-201ENST00000308177 PIGBQ92521 554 aa13.07□□□□□ -0.32
PCDHGC3-201ENST00000308177 FEZ1Q99689 392 aa13.07□□□□□ -0.32
PCDHGC3-201ENST00000308177 TTC12Q9H892 705 aaPredicted RBP13.07□□□□□ -0.32
PCDHGC3-201ENST00000308177 DEXIO95424 95 aa13.07□□□□□ -0.32
PCDHGC3-201ENST00000308177 CRKLP46109 303 aaKnown RBP13.07□□□□□ -0.32
PCDHGC3-201ENST00000308177 ODF2Q5BJF6 829 aa13.07□□□□□ -0.32
PCDHGC3-201ENST00000308177 KRI1Q8N9T8 703 aaKnown RBP13.07□□□□□ -0.32
PCDHGC3-201ENST00000308177 DHX58Q96C10 678 aa13.07□□□□□ -0.32
PCDHGC3-201ENST00000308177 NUP88Q99567 741 aaPredicted RBP13.07□□□□□ -0.32
PCDHGC3-201ENST00000308177 KIF20AO95235 890 aa13.06□□□□□ -0.32
PCDHGC3-201ENST00000308177 ADORA1P30542 326 aa13.06□□□□□ -0.32
PCDHGC3-201ENST00000308177 MTX1Q13505 466 aa13.06□□□□□ -0.32
PCDHGC3-201ENST00000308177 HS1BP3Q53T59 392 aa13.06□□□□□ -0.32
PCDHGC3-201ENST00000308177 ANO1Q5XXA6 986 aa13.06□□□□□ -0.32
PCDHGC3-201ENST00000308177 TEX11Q8IYF3 940 aa13.06□□□□□ -0.32
PCDHGC3-201ENST00000308177 ANTXR1Q9H6X2 564 aa13.06□□□□□ -0.32
PCDHGC3-201ENST00000308177 PATL2C9JE40 543 aaKnown RBP13.06□□□□□ -0.32
PCDHGC3-201ENST00000308177 STAT6P42226 847 aa13.06□□□□□ -0.32
PCDHGC3-201ENST00000308177 RILPL1Q5EBL4 403 aa13.06□□□□□ -0.32
PCDHGC3-201ENST00000308177 CCDC150Q8NCX0 1101 aa13.06□□□□□ -0.32
PCDHGC3-201ENST00000308177 MYL10Q9BUA6 226 aa13.06□□□□□ -0.32
PCDHGC3-201ENST00000308177 RMND1Q9NWS8 449 aa13.06□□□□□ -0.32
PCDHGC3-201ENST00000308177 AATFQ9NY61 560 aaKnown RBP eCLIP13.06□□□□□ -0.32
PCDHGC3-201ENST00000308177 FGAP02671 866 aa13.06□□□□□ -0.32
PCDHGC3-201ENST00000308177 LMOD1P29536 600 aaPredicted RBP13.06□□□□□ -0.32
PCDHGC3-201ENST00000308177 MTIF2P46199 727 aaKnown RBP13.06□□□□□ -0.32
PCDHGC3-201ENST00000308177 ZFYVE27Q5T4F4 411 aa13.06□□□□□ -0.32
PCDHGC3-201ENST00000308177 LUZP1Q86V48 1076 aa13.06□□□□□ -0.32
PCDHGC3-201ENST00000308177 C6orf50Q9HD87 102 aa13.06□□□□□ -0.32
PCDHGC3-201ENST00000308177 ATG3Q9NT62 314 aa13.06□□□□□ -0.32
PCDHGC3-201ENST00000308177 PTPRUQ92729 1446 aa13.06□□□□□ -0.32
PCDHGC3-201ENST00000308177 PPP1R12BO60237 982 aaPredicted RBP13.05□□□□□ -0.32
PCDHGC3-201ENST00000308177 HSP90AA4PQ58FG1 418 aa13.05□□□□□ -0.32
PCDHGC3-201ENST00000308177 AKNAD1Q5T1N1 836 aa13.05□□□□□ -0.32
PCDHGC3-201ENST00000308177 CCDC181Q5TID7 509 aa13.05□□□□□ -0.32
PCDHGC3-201ENST00000308177 ZNF274Q96GC6 653 aaPredicted RBP13.05□□□□□ -0.32
PCDHGC3-201ENST00000308177 EYA3Q99504 573 aa13.05□□□□□ -0.32
PCDHGC3-201ENST00000308177 TMEM63CQ9P1W3 806 aa13.05□□□□□ -0.32
PCDHGC3-201ENST00000308177 GGA1Q9UJY5 639 aa13.05□□□□□ -0.32
PCDHGC3-201ENST00000308177 URI1O94763 535 aaPredicted RBP13.05□□□□□ -0.32
PCDHGC3-201ENST00000308177 UBA5Q9GZZ9 404 aa13.05□□□□□ -0.32
PCDHGC3-201ENST00000308177 MTMR6Q9Y217 621 aa13.05□□□□□ -0.32
PCDHGC3-201ENST00000308177 CRB1P82279 1406 aa13.05□□□□□ -0.32
PCDHGC3-201ENST00000308177 PREX1Q8TCU6 1659 aa13.05□□□□□ -0.32
PCDHGC3-201ENST00000308177 N4BP3O15049 544 aa13.05□□□□□ -0.32
PCDHGC3-201ENST00000308177 RRAGBQ5VZM2 374 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms