RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 DUOX1Q9NRD9 1551 aa20.9■□□□□ 0.94
KRT28-201ENST00000306658 A0A0G2JLW4 131 aa20.89■□□□□ 0.94
KRT28-201ENST00000306658 G3V3G9 751 aa20.89■□□□□ 0.94
KRT28-201ENST00000306658 FGAP02671 866 aa20.89■□□□□ 0.94
KRT28-201ENST00000306658 APPP05067 770 aa20.89■□□□□ 0.94
KRT28-201ENST00000306658 LDHBP07195 334 aaKnown RBP20.89■□□□□ 0.94
KRT28-201ENST00000306658 DPEP1P16444 411 aa20.89■□□□□ 0.94
KRT28-201ENST00000306658 PRDX5P30044 214 aa20.89■□□□□ 0.94
KRT28-201ENST00000306658 MECOMQ03112 1051 aa20.89■□□□□ 0.94
KRT28-201ENST00000306658 IMMTQ16891 758 aaKnown RBP20.89■□□□□ 0.94
KRT28-201ENST00000306658 DCAF8Q5TAQ9 597 aa20.89■□□□□ 0.94
KRT28-201ENST00000306658 TBC1D22AQ8WUA7 517 aa20.89■□□□□ 0.94
KRT28-201ENST00000306658 ZNF219Q9P2Y4 722 aaPredicted RBP20.89■□□□□ 0.94
KRT28-201ENST00000306658 JAG2Q9Y219 1238 aa20.89■□□□□ 0.94
KRT28-201ENST00000306658 KIF13BQ9NQT8 1826 aa20.89■□□□□ 0.94
KRT28-201ENST00000306658 PATL2C9JE40 543 aaKnown RBP20.89■□□□□ 0.93
KRT28-201ENST00000306658 FOXP2O15409 715 aa20.89■□□□□ 0.93
KRT28-201ENST00000306658 RUFY3Q7L099 469 aa20.89■□□□□ 0.93
KRT28-201ENST00000306658 DZIP1Q86YF9 867 aaKnown RBP20.89■□□□□ 0.93
KRT28-201ENST00000306658 RTFDC1Q9BY42 306 aaPredicted RBP20.89■□□□□ 0.93
KRT28-201ENST00000306658 ARMT1Q9H993 441 aa20.89■□□□□ 0.93
KRT28-201ENST00000306658 CCDC88AQ3V6T2 1871 aa20.89■□□□□ 0.93
KRT28-201ENST00000306658 MAGEB6P1A0A0J9YX57 407 aa20.88■□□□□ 0.93
KRT28-201ENST00000306658 MIGA1Q8NAN2 632 aa20.88■□□□□ 0.93
KRT28-201ENST00000306658 SUPT20HQ8NEM7 779 aa20.88■□□□□ 0.93
KRT28-201ENST00000306658 RPAP1Q9BWH6 1393 aaPredicted RBP20.88■□□□□ 0.93
KRT28-201ENST00000306658 HSP90AA1P07900 732 aaKnown RBP20.87■□□□□ 0.93
KRT28-201ENST00000306658 KCNA3P22001 575 aa20.87■□□□□ 0.93
KRT28-201ENST00000306658 GSTO1P78417 241 aa20.87■□□□□ 0.93
KRT28-201ENST00000306658 ALX1Q15699 326 aa20.87■□□□□ 0.93
KRT28-201ENST00000306658 BLOC1S2Q6QNY1 142 aa20.87■□□□□ 0.93
KRT28-201ENST00000306658 NACAP1Q9BZK3 213 aa20.87■□□□□ 0.93
KRT28-201ENST00000306658 FAM205AQ6ZU69 1335 aa20.87■□□□□ 0.93
KRT28-201ENST00000306658 ADGRA1Q86SQ6 560 aa20.86■□□□□ 0.93
KRT28-201ENST00000306658 LCORLQ8N3X6 602 aa20.86■□□□□ 0.93
KRT28-201ENST00000306658 ZNF384Q8TF68 577 aa20.86■□□□□ 0.93
KRT28-201ENST00000306658 NEK1Q96PY6 1258 aa20.86■□□□□ 0.93
KRT28-201ENST00000306658 PDRG1Q9NUG6 133 aa20.86■□□□□ 0.93
KRT28-201ENST00000306658 ZNF213O14771 459 aa20.86■□□□□ 0.93
KRT28-201ENST00000306658 C21orf2O43822 256 aa20.86■□□□□ 0.93
KRT28-201ENST00000306658 HMGB1P09429 215 aaKnown RBP20.86■□□□□ 0.93
KRT28-201ENST00000306658 TTLL5Q6EMB2 1281 aa20.86■□□□□ 0.93
KRT28-201ENST00000306658 RTKN2Q8IZC4 609 aa20.86■□□□□ 0.93
KRT28-201ENST00000306658 TTC14Q96N46 770 aa20.86■□□□□ 0.93
KRT28-201ENST00000306658 PIM2Q9P1W9 311 aa20.86■□□□□ 0.93
KRT28-201ENST00000306658 SLC4A4Q9Y6R1 1079 aa20.86■□□□□ 0.93
KRT28-201ENST00000306658 ZMYM6O95789 1325 aa20.85■□□□□ 0.93
KRT28-201ENST00000306658 PSDA5PKW4 1024 aaPredicted RBP20.85■□□□□ 0.93
KRT28-201ENST00000306658 LDHCP07864 332 aa20.85■□□□□ 0.93
KRT28-201ENST00000306658 CCDC93Q567U6 631 aa20.85■□□□□ 0.93
KRT28-201ENST00000306658 MFSD14BQ5SR56 506 aa20.85■□□□□ 0.93
KRT28-201ENST00000306658 PODNQ7Z5L7 613 aa20.85■□□□□ 0.93
KRT28-201ENST00000306658 IFNL3Q8IZI9 196 aa20.85■□□□□ 0.93
KRT28-201ENST00000306658 TAF6LQ9Y6J9 622 aa20.85■□□□□ 0.93
KRT28-201ENST00000306658 MAST2Q6P0Q8 1798 aa20.84■□□□□ 0.93
KRT28-201ENST00000306658 GTF2IP78347 998 aa20.84■□□□□ 0.93
KRT28-201ENST00000306658 DOK7Q18PE1 504 aa20.84■□□□□ 0.93
KRT28-201ENST00000306658 SOGA3Q5TF21 947 aa20.84■□□□□ 0.93
KRT28-201ENST00000306658 SPRYD3Q8NCJ5 442 aa20.84■□□□□ 0.93
KRT28-201ENST00000306658 RIOK1Q9BRS2 568 aaKnown RBP20.84■□□□□ 0.93
KRT28-201ENST00000306658 NAPBQ9H115 298 aa20.84■□□□□ 0.93
KRT28-201ENST00000306658 GSG1L2A8MUP6 293 aa20.83■□□□□ 0.93
KRT28-201ENST00000306658 E7EWF7 191 aa20.83■□□□□ 0.93
KRT28-201ENST00000306658 CPA1P15085 419 aa20.83■□□□□ 0.93
KRT28-201ENST00000306658 RPS6KB1P23443 525 aa20.83■□□□□ 0.93
KRT28-201ENST00000306658 SGIP1Q9BQI5 828 aa20.83■□□□□ 0.93
KRT28-201ENST00000306658 SUGT1Q9Y2Z0 365 aa20.83■□□□□ 0.93
KRT28-201ENST00000306658 AK2P54819 239 aa20.83■□□□□ 0.92
KRT28-201ENST00000306658 SLF2Q8IX21 1173 aa20.83■□□□□ 0.92
KRT28-201ENST00000306658 ALDH8A1Q9H2A2 487 aaPredicted RBP20.83■□□□□ 0.92
KRT28-201ENST00000306658 CD2APQ9Y5K6 639 aa20.83■□□□□ 0.92
KRT28-201ENST00000306658 SNED1Q8TER0 1413 aa20.82■□□□□ 0.92
KRT28-201ENST00000306658 PRKAB2O43741 272 aa20.82■□□□□ 0.92
KRT28-201ENST00000306658 ANKRD1Q15327 319 aa20.82■□□□□ 0.92
KRT28-201ENST00000306658 TMX3Q96JJ7 454 aa20.82■□□□□ 0.92
KRT28-201ENST00000306658 NOL10Q9BSC4 688 aaKnown RBP20.82■□□□□ 0.92
KRT28-201ENST00000306658 SLKQ9H2G2 1235 aaPredicted RBP20.82■□□□□ 0.92
KRT28-201ENST00000306658 PPP1R1BQ9UD71 204 aaPredicted RBP20.82■□□□□ 0.92
KRT28-201ENST00000306658 CHD4Q14839 1912 aa20.81■□□□□ 0.92
KRT28-201ENST00000306658 BAG3O95817 575 aa20.81■□□□□ 0.92
KRT28-201ENST00000306658 TDO2P48775 406 aa20.81■□□□□ 0.92
KRT28-201ENST00000306658 HAND2P61296 217 aa20.81■□□□□ 0.92
KRT28-201ENST00000306658 DYNLL1P63167 89 aaKnown RBP20.81■□□□□ 0.92
KRT28-201ENST00000306658 KIAA2012Q0VF49 1180 aa20.81■□□□□ 0.92
KRT28-201ENST00000306658 STOX1Q6ZVD7 989 aa20.81■□□□□ 0.92
KRT28-201ENST00000306658 CERS3Q8IU89 383 aa20.81■□□□□ 0.92
KRT28-201ENST00000306658 PSMD1Q99460 953 aa20.81■□□□□ 0.92
KRT28-201ENST00000306658 LIMCH1Q9UPQ0 1083 aa20.81■□□□□ 0.92
KRT28-201ENST00000306658 DALRD3Q5D0E6 543 aaKnown RBP20.8■□□□□ 0.92
KRT28-201ENST00000306658 FBXW7Q969H0 707 aa20.8■□□□□ 0.92
KRT28-201ENST00000306658 CRNKL1Q9BZJ0 848 aaKnown RBP20.8■□□□□ 0.92
KRT28-201ENST00000306658 DBNDD1Q9H9R9 158 aa20.8■□□□□ 0.92
KRT28-201ENST00000306658 EPB41L4AQ9HCS5 686 aaPredicted RBP20.8■□□□□ 0.92
KRT28-201ENST00000306658 AATFQ9NY61 560 aaKnown RBP eCLIP20.8■□□□□ 0.92
KRT28-201ENST00000306658 KIAA1551Q9HCM1 1747 aa20.8■□□□□ 0.92
KRT28-201ENST00000306658 GRIK5Q16478 980 aa20.8■□□□□ 0.92
KRT28-201ENST00000306658 GIMAP6Q6P9H5 292 aa20.8■□□□□ 0.92
KRT28-201ENST00000306658 NOL8Q76FK4 1167 aaKnown RBP20.8■□□□□ 0.92
KRT28-201ENST00000306658 DHX32Q7L7V1 743 aaKnown RBP20.8■□□□□ 0.92
KRT28-201ENST00000306658 PTGER2P43116 358 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms