RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 GCC1Q96CN9 775 aa13.45□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 GPATCH3Q96I76 525 aa13.45□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 SERPINA10Q9UK55 444 aa13.45□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 WNT10BO00744 389 aa13.44□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 SMARCA5O60264 1052 aaPredicted RBP13.44□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 NEFLP07196 543 aa13.44□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 SCARF1Q14162 830 aa13.44□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 SULF1Q8IWU6 871 aa13.44□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 TEKT1Q969V4 418 aa13.44□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 ZNF512BQ96KM6 892 aaPredicted RBP13.44□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 HMG20BQ9P0W2 317 aa13.44□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 PITPNM2Q9BZ72 1349 aa13.43□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 PRDX5P30044 214 aa13.43□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 CRKP46108 304 aa13.43□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 HDLBPQ00341 1268 aaKnown RBP13.43□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 ANGEL2Q5VTE6 544 aaKnown RBP13.43□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 ERICH6Q7L0X2 663 aa13.43□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 CDC37L1Q7L3B6 337 aa13.43□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 APOBEC3FQ8IUX4 373 aaKnown RBP13.43□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 SLF2Q8IX21 1173 aa13.43□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 MTMR14Q8NCE2 650 aa13.43□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 SPDYE2BA6NHP3 402 aa13.42□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 SPDYE6P0CI01 402 aa13.42□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 GRIK5Q16478 980 aa13.42□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 NBPF9Q3BBW0 867 aa13.42□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 PI16Q6UXB8 463 aa13.42□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 KRT26Q7Z3Y9 468 aa13.42□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 SNRKQ9NRH2 765 aa13.42□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 TMOD2Q9NZR1 351 aa13.42□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 LRP2BPQ9P2M1 347 aa13.42□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 PGAP2Q9UHJ9 254 aa13.42□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 HSPA6P17066 643 aa13.41□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 ZAP70P43403 619 aa13.41□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 GSTO1P78417 241 aa13.41□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 ANKRD45Q5TZF3 282 aa13.41□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.41□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 GLIS2Q9BZE0 524 aaPredicted RBP13.41□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 VEZTQ9HBM0 779 aa13.41□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 RAI14Q9P0K7 980 aa13.41□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 ASTN2O75129 1339 aaPredicted RBP13.4□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 CLRN2A0PK11 232 aa13.4□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 APLP1P51693 650 aa13.4□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 TNFAIP1Q13829 316 aa13.4□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 TTF1Q15361 905 aaPredicted RBP13.4□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 HHIPL2Q6UWX4 724 aa13.4□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 USP48Q86UV5 1035 aa13.4□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 ZDHHC15Q96MV8 337 aa13.4□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 DNAJC2Q99543 621 aaKnown RBP13.4□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 MRIQ9BWK5 157 aa13.4□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 ZNF408Q9H9D4 720 aa13.4□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 CDK5RAP2Q96SN8 1893 aa13.4□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 PASKQ96RG2 1323 aa13.39□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 FOCADQ5VW36 1801 aa13.39□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 ADM5C9JUS6 153 aa13.39□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 ITGBL1O95965 494 aaPredicted RBP13.39□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 CYP2E1P05181 493 aaPredicted RBP13.39□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 DIXDC1Q155Q3 683 aa13.39□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 TBC1D9Q6ZT07 1266 aa13.39□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 ZBED3Q96IU2 234 aaPredicted RBP13.39□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 PRMT6Q96LA8 375 aaPredicted RBP13.39□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 NOL10Q9BSC4 688 aaKnown RBP13.39□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 ECHDC1Q9NTX5 307 aa13.39□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 PCDHAC2Q9Y5I4 1007 aa13.39□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 MROH7-TTC4A0A0A0MT08 1334 aa13.39□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 PAPPA2Q9BXP8 1791 aa13.38□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 TRAF5O00463 557 aa13.38□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 ERC2O15083 957 aa13.38□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 IGSF3O75054 1194 aa13.38□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 IDH1O75874 414 aaKnown RBP13.38□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 LDHCP07864 332 aa13.38□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 ATP5JP18859 108 aa13.38□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 NF2P35240 595 aa13.38□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 TNNI2P48788 182 aa13.38□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 MECOMQ03112 1051 aa13.38□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 SPDYE2Q495Y8 402 aa13.38□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 BOLA2Q9H3K6 86 aa13.38□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 TDRD3Q9H7E2 651 aaKnown RBP13.38□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 DAGLAQ9Y4D2 1042 aa13.38□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 PPP2R3BQ9Y5P8 575 aa13.38□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 TTC41PQ6P2S7 1318 aa13.38□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 TMEM88BA6NKF7 163 aa13.37□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 CELF2O95319 508 aaKnown RBP13.37□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 IGHDP01880 384 aa13.37□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 MAP3K12Q12852 859 aa13.37□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 B4GALNT3Q6L9W6 998 aa13.37□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 NAA16Q6N069 864 aaPredicted RBP13.37□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 SMC5Q8IY18 1101 aa13.37□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 NSUN4Q96CB9 384 aaKnown RBP13.37□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 CREBZFQ9NS37 354 aa13.37□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 ZNF70Q9UC06 446 aaPredicted RBP13.37□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 NDUFB9Q9Y6M9 179 aa13.37□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 GAKO14976 1311 aa13.37□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 GOLIM4O00461 696 aa13.36□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 MX1P20591 662 aa13.36□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 BTDP43251 543 aa13.36□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 CDCA5Q96FF9 252 aa13.36□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 HAUS7Q99871 368 aa13.36□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 LNPKQ9C0E8 428 aa13.36□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 PIH1D3Q9NQM4 214 aaKnown RBP13.36□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 PAG1Q9NWQ8 432 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms