RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 USP2O75604 605 aaPredicted RBP25.69■■□□□ 1.7
RER1-201ENST00000306256 IREB2P48200 963 aaKnown RBP25.69■■□□□ 1.7
RER1-201ENST00000306256 TNFAIP1Q13829 316 aa25.69■■□□□ 1.7
RER1-201ENST00000306256 MANSC4A6NHS7 340 aaPredicted RBP25.68■■□□□ 1.7
RER1-201ENST00000306256 SOX10P56693 466 aa25.68■■□□□ 1.7
RER1-201ENST00000306256 PUM3Q15397 648 aaKnown RBP25.68■■□□□ 1.7
RER1-201ENST00000306256 EYA2O00167 538 aa25.67■■□□□ 1.7
RER1-201ENST00000306256 IFIT1P09914 478 aaKnown RBP25.67■■□□□ 1.7
RER1-201ENST00000306256 ZBTB48P10074 688 aaPredicted RBP25.67■■□□□ 1.7
RER1-201ENST00000306256 FGFR2P21802 821 aa25.67■■□□□ 1.7
RER1-201ENST00000306256 TBC1D22AQ8WUA7 517 aa25.67■■□□□ 1.7
RER1-201ENST00000306256 TMEM39BQ9GZU3 492 aa25.67■■□□□ 1.7
RER1-201ENST00000306256 NOB1Q9ULX3 412 aaKnown RBP25.67■■□□□ 1.7
RER1-201ENST00000306256 PDE4DIPQ5VU43 2346 aa25.66■■□□□ 1.7
RER1-201ENST00000306256 GJA5P36382 358 aa25.66■■□□□ 1.7
RER1-201ENST00000306256 TEPSINQ96N21 525 aa25.66■■□□□ 1.7
RER1-201ENST00000306256 UBTFL1P0CB47 393 aaPredicted RBP25.65■■□□□ 1.7
RER1-201ENST00000306256 CACNB3P54284 484 aa25.65■■□□□ 1.7
RER1-201ENST00000306256 NOM1Q5C9Z4 860 aaKnown RBP25.65■■□□□ 1.7
RER1-201ENST00000306256 IFNL1Q8IU54 200 aa25.65■■□□□ 1.7
RER1-201ENST00000306256 ANKRD13AQ8IZ07 590 aa25.65■■□□□ 1.7
RER1-201ENST00000306256 CFHR5Q9BXR6 569 aa25.65■■□□□ 1.7
RER1-201ENST00000306256 HPS5Q9UPZ3 1129 aa25.65■■□□□ 1.7
RER1-201ENST00000306256 KIF16BQ96L93 1317 aa25.64■■□□□ 1.7
RER1-201ENST00000306256 UNCXA6NJT0 531 aa25.64■■□□□ 1.7
RER1-201ENST00000306256 IGF2BP3O00425 579 aaKnown RBP eCLIP25.64■■□□□ 1.7
RER1-201ENST00000306256 FKTNO75072 461 aa25.64■■□□□ 1.7
RER1-201ENST00000306256 ATG9AQ7Z3C6 839 aa25.64■■□□□ 1.7
RER1-201ENST00000306256 TEKT1Q969V4 418 aa25.64■■□□□ 1.7
RER1-201ENST00000306256 SIL1Q9H173 461 aa25.64■■□□□ 1.7
RER1-201ENST00000306256 ELP3Q9H9T3 547 aa25.64■■□□□ 1.7
RER1-201ENST00000306256 AK9Q5TCS8 1911 aa25.63■■□□□ 1.69
RER1-201ENST00000306256 ALDH1A1P00352 501 aa25.63■■□□□ 1.69
RER1-201ENST00000306256 CT47B1P0C2W7 299 aaPredicted RBP25.63■■□□□ 1.69
RER1-201ENST00000306256 SLC5A1P13866 664 aa25.63■■□□□ 1.69
RER1-201ENST00000306256 HDLBPQ00341 1268 aaKnown RBP25.63■■□□□ 1.69
RER1-201ENST00000306256 TNNI2P48788 182 aa25.62■■□□□ 1.69
RER1-201ENST00000306256 INHBEP58166 350 aa25.62■■□□□ 1.69
RER1-201ENST00000306256 CCER2I3L3R5 266 aa25.61■■□□□ 1.69
RER1-201ENST00000306256 PKN2Q16513 984 aaKnown RBP25.61■■□□□ 1.69
RER1-201ENST00000306256 LPIN2Q92539 896 aa25.61■■□□□ 1.69
RER1-201ENST00000306256 API5Q9BZZ5 524 aaKnown RBP25.61■■□□□ 1.69
RER1-201ENST00000306256 LRRFIP2Q9Y608 721 aaKnown RBP25.61■■□□□ 1.69
RER1-201ENST00000306256 CNKSR2Q8WXI2 1034 aa25.6■■□□□ 1.69
RER1-201ENST00000306256 OPTNQ96CV9 577 aa25.6■■□□□ 1.69
RER1-201ENST00000306256 ZDHHC15Q96MV8 337 aa25.6■■□□□ 1.69
RER1-201ENST00000306256 APOBEC3HQ6NTF7 200 aaKnown RBP25.59■■□□□ 1.69
RER1-201ENST00000306256 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.59■■□□□ 1.69
RER1-201ENST00000306256 MEIS3Q99687 375 aa25.59■■□□□ 1.69
RER1-201ENST00000306256 MAST3O60307 1309 aa25.59■■□□□ 1.69
RER1-201ENST00000306256 RARSP54136 660 aaKnown RBP25.58■■□□□ 1.69
RER1-201ENST00000306256 ATP2B3Q16720 1220 aa25.58■■□□□ 1.69
RER1-201ENST00000306256 TMOD2Q9NZR1 351 aa25.58■■□□□ 1.69
RER1-201ENST00000306256 PA2G4Q9UQ80 394 aaKnown RBP25.58■■□□□ 1.69
RER1-201ENST00000306256 SUGT1Q9Y2Z0 365 aa25.58■■□□□ 1.69
RER1-201ENST00000306256 CIAO1O76071 339 aa25.57■■□□□ 1.68
RER1-201ENST00000306256 VGLL4Q14135 290 aa25.57■■□□□ 1.68
RER1-201ENST00000306256 FBXO46Q6PJ61 603 aaPredicted RBP25.57■■□□□ 1.68
RER1-201ENST00000306256 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.57■■□□□ 1.68
RER1-201ENST00000306256 PTPN18Q99952 460 aa25.57■■□□□ 1.68
RER1-201ENST00000306256 CEP126Q9P2H0 1117 aa25.57■■□□□ 1.68
RER1-201ENST00000306256 MYH2Q9UKX2 1941 aa25.57■■□□□ 1.68
RER1-201ENST00000306256 MAP3K9P80192 1104 aa25.56■■□□□ 1.68
RER1-201ENST00000306256 CRHR2Q13324 411 aa25.56■■□□□ 1.68
RER1-201ENST00000306256 HHIPL2Q6UWX4 724 aa25.56■■□□□ 1.68
RER1-201ENST00000306256 WDR66Q8TBY9 1149 aa25.56■■□□□ 1.68
RER1-201ENST00000306256 MRIQ9BWK5 157 aa25.56■■□□□ 1.68
RER1-201ENST00000306256 FBXO3Q9UK99 471 aa25.56■■□□□ 1.68
RER1-201ENST00000306256 CSADQ9Y600 493 aa25.55■■□□□ 1.68
RER1-201ENST00000306256 TESPA1A2RU30 521 aaPredicted RBP25.54■■□□□ 1.68
RER1-201ENST00000306256 OTUD7BQ6GQQ9 843 aa25.54■■□□□ 1.68
RER1-201ENST00000306256 MS4A4AQ96JQ5 239 aa25.54■■□□□ 1.68
RER1-201ENST00000306256 TNRC18O15417 2968 aaPredicted RBP25.53■■□□□ 1.68
RER1-201ENST00000306256 PRDX5P30044 214 aa25.53■■□□□ 1.68
RER1-201ENST00000306256 PHKA1P46020 1223 aa25.53■■□□□ 1.68
RER1-201ENST00000306256 DIXDC1Q155Q3 683 aa25.53■■□□□ 1.68
RER1-201ENST00000306256 FKBP1CQ5VVH2 108 aa25.53■■□□□ 1.68
RER1-201ENST00000306256 FAM83AQ86UY5 434 aa25.53■■□□□ 1.68
RER1-201ENST00000306256 OTUD5Q96G74 571 aa25.53■■□□□ 1.68
RER1-201ENST00000306256 DAGLAQ9Y4D2 1042 aa25.53■■□□□ 1.68
RER1-201ENST00000306256 TRIM17Q9Y577 477 aa25.53■■□□□ 1.68
RER1-201ENST00000306256 ADORA1P30542 326 aa25.52■■□□□ 1.68
RER1-201ENST00000306256 IL15P40933 162 aaPredicted RBP25.52■■□□□ 1.68
RER1-201ENST00000306256 BRI3BPQ8WY22 251 aa25.52■■□□□ 1.68
RER1-201ENST00000306256 HDAC5Q9UQL6 1122 aa25.52■■□□□ 1.68
RER1-201ENST00000306256 CCL15-CCL14A0A0B4J2E2 113 aa25.51■■□□□ 1.67
RER1-201ENST00000306256 CCL15Q16663 113 aa25.51■■□□□ 1.67
RER1-201ENST00000306256 OTOP1Q7RTM1 612 aa25.51■■□□□ 1.67
RER1-201ENST00000306256 CD99L2Q8TCZ2 262 aa25.51■■□□□ 1.67
RER1-201ENST00000306256 WRNIP1Q96S55 665 aa25.51■■□□□ 1.67
RER1-201ENST00000306256 COPRSQ9NQ92 184 aa25.51■■□□□ 1.67
RER1-201ENST00000306256 GNL3LQ9NVN8 582 aaKnown RBP25.51■■□□□ 1.67
RER1-201ENST00000306256 SNCAIPQ9Y6H5 919 aa25.51■■□□□ 1.67
RER1-201ENST00000306256 RPAP1Q9BWH6 1393 aaPredicted RBP25.51■■□□□ 1.67
RER1-201ENST00000306256 KIAA0100Q14667 2235 aaKnown RBP25.5■■□□□ 1.67
RER1-201ENST00000306256 INTS3Q68E01 1043 aaKnown RBP25.5■■□□□ 1.67
RER1-201ENST00000306256 LDHBP07195 334 aaKnown RBP25.49■■□□□ 1.67
RER1-201ENST00000306256 CDC42EP5Q6NZY7 148 aa25.49■■□□□ 1.67
RER1-201ENST00000306256 ARHGAP45Q92619 1136 aa25.49■■□□□ 1.67
RER1-201ENST00000306256 ZKSCAN4Q969J2 545 aaPredicted RBP25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms