RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 RFC4P35249 363 aa7.74□□□□□ -1.17
USP47-201ENST00000305481 CCT2P78371 535 aaKnown RBP7.74□□□□□ -1.17
USP47-201ENST00000305481 FAM173BQ6P4H8 233 aa7.74□□□□□ -1.17
USP47-201ENST00000305481 ADGRA1Q86SQ6 560 aa7.74□□□□□ -1.17
USP47-201ENST00000305481 DDX11Q96FC9 970 aa7.74□□□□□ -1.17
USP47-201ENST00000305481 ZNF274Q96GC6 653 aaPredicted RBP7.74□□□□□ -1.17
USP47-201ENST00000305481 ARMT1Q9H993 441 aa7.74□□□□□ -1.17
USP47-201ENST00000305481 TACC3Q9Y6A5 838 aa7.74□□□□□ -1.17
USP47-201ENST00000305481 PRC1O43663 620 aa7.73□□□□□ -1.17
USP47-201ENST00000305481 PRKAB2O43741 272 aa7.73□□□□□ -1.17
USP47-201ENST00000305481 MBD3O95983 291 aa7.73□□□□□ -1.17
USP47-201ENST00000305481 PDCP20941 246 aa7.73□□□□□ -1.17
USP47-201ENST00000305481 NFIXQ14938 502 aa7.73□□□□□ -1.17
USP47-201ENST00000305481 AIDAQ96BJ3 306 aa7.73□□□□□ -1.17
USP47-201ENST00000305481 INCENPQ9NQS7 918 aa7.73□□□□□ -1.17
USP47-201ENST00000305481 TNRC6CQ9HCJ0 1690 aaKnown RBP7.73□□□□□ -1.17
USP47-201ENST00000305481 SALL1Q9NSC2 1324 aa7.73□□□□□ -1.17
USP47-201ENST00000305481 A0A0U1RQG5 324 aaPredicted RBP7.73□□□□□ -1.17
USP47-201ENST00000305481 GSG1L2A8MUP6 293 aa7.73□□□□□ -1.17
USP47-201ENST00000305481 APPP05067 770 aa7.73□□□□□ -1.17
USP47-201ENST00000305481 MCM5P33992 734 aa7.73□□□□□ -1.17
USP47-201ENST00000305481 ALX1Q15699 326 aa7.73□□□□□ -1.17
USP47-201ENST00000305481 LCORLQ8N3X6 602 aa7.73□□□□□ -1.17
USP47-201ENST00000305481 NCOA7Q8NI08 942 aa7.73□□□□□ -1.17
USP47-201ENST00000305481 LLPHQ9BRT6 129 aaKnown RBP7.73□□□□□ -1.17
USP47-201ENST00000305481 HPS5Q9UPZ3 1129 aa7.73□□□□□ -1.17
USP47-201ENST00000305481 ATP6V1DQ9Y5K8 247 aa7.73□□□□□ -1.17
USP47-201ENST00000305481 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.72□□□□□ -1.17
USP47-201ENST00000305481 PATL2C9JE40 543 aaKnown RBP7.72□□□□□ -1.17
USP47-201ENST00000305481 FIBPO43427 364 aa7.72□□□□□ -1.17
USP47-201ENST00000305481 PDIA4P13667 645 aaKnown RBP7.72□□□□□ -1.17
USP47-201ENST00000305481 CYB5R4Q7L1T6 521 aa7.72□□□□□ -1.17
USP47-201ENST00000305481 FBXO33Q7Z6M2 555 aa7.72□□□□□ -1.17
USP47-201ENST00000305481 IFNL3Q8IZI9 196 aa7.72□□□□□ -1.17
USP47-201ENST00000305481 ZNF384Q8TF68 577 aa7.72□□□□□ -1.17
USP47-201ENST00000305481 PPFIA3O75145 1194 aa7.72□□□□□ -1.17
USP47-201ENST00000305481 LRP2BPQ9P2M1 347 aa7.72□□□□□ -1.17
USP47-201ENST00000305481 BRWD3Q6RI45 1802 aa7.72□□□□□ -1.17
USP47-201ENST00000305481 ZMYM6O95789 1325 aa7.72□□□□□ -1.17
USP47-201ENST00000305481 IRS2Q9Y4H2 1338 aa7.72□□□□□ -1.17
USP47-201ENST00000305481 PTPDC1A2A3K4 754 aa7.72□□□□□ -1.17
USP47-201ENST00000305481 FDPSP14324 419 aaKnown RBP7.72□□□□□ -1.17
USP47-201ENST00000305481 MIGA1Q8NAN2 632 aa7.72□□□□□ -1.17
USP47-201ENST00000305481 UBR3Q6ZT12 1888 aa7.72□□□□□ -1.17
USP47-201ENST00000305481 NEDD4P46934 1319 aa7.71□□□□□ -1.17
USP47-201ENST00000305481 PNPLA7Q6ZV29 1317 aa7.71□□□□□ -1.17
USP47-201ENST00000305481 WDR19Q8NEZ3 1342 aa7.71□□□□□ -1.17
USP47-201ENST00000305481 SYCE3A1L190 88 aa7.71□□□□□ -1.17
USP47-201ENST00000305481 TRIM37O94972 964 aa7.71□□□□□ -1.17
USP47-201ENST00000305481 TXNRD3Q86VQ6 643 aa7.71□□□□□ -1.17
USP47-201ENST00000305481 PROM2Q8N271 834 aa7.71□□□□□ -1.17
USP47-201ENST00000305481 SENP2Q9HC62 589 aa7.71□□□□□ -1.17
USP47-201ENST00000305481 CACNA1SQ13698 1873 aa7.71□□□□□ -1.17
USP47-201ENST00000305481 CARMIL3Q8ND23 1372 aa7.71□□□□□ -1.17
USP47-201ENST00000305481 GYS1P13807 737 aa7.71□□□□□ -1.18
USP47-201ENST00000305481 UBE2HP62256 183 aa7.71□□□□□ -1.18
USP47-201ENST00000305481 RESTQ13127 1097 aa7.71□□□□□ -1.18
USP47-201ENST00000305481 CAVIN4Q5BKX8 364 aa7.71□□□□□ -1.18
USP47-201ENST00000305481 RALYLQ86SE5 291 aaKnown RBP7.71□□□□□ -1.18
USP47-201ENST00000305481 RBSNQ9H1K0 784 aa7.71□□□□□ -1.18
USP47-201ENST00000305481 TFCP2L1Q9NZI6 479 aa7.71□□□□□ -1.18
USP47-201ENST00000305481 ABCF2Q9UG63 623 aa7.71□□□□□ -1.18
USP47-201ENST00000305481 NAP1L2Q9ULW6 460 aaPredicted RBP7.71□□□□□ -1.18
USP47-201ENST00000305481 B4E1Z4 1266 aa7.71□□□□□ -1.18
USP47-201ENST00000305481 ADRA2BP18089 450 aa7.71□□□□□ -1.18
USP47-201ENST00000305481 CYP7A1P22680 504 aa7.71□□□□□ -1.18
USP47-201ENST00000305481 CTDSPL2Q05D32 466 aa7.71□□□□□ -1.18
USP47-201ENST00000305481 KRT27Q7Z3Y8 459 aa7.71□□□□□ -1.18
USP47-201ENST00000305481 TTC6Q86TZ1 520 aa7.71□□□□□ -1.18
USP47-201ENST00000305481 GNL3LQ9NVN8 582 aaKnown RBP7.71□□□□□ -1.18
USP47-201ENST00000305481 KLF18A0A0U1RQI7 1052 aa7.7□□□□□ -1.18
USP47-201ENST00000305481 TPRNQ4KMQ1 711 aa7.7□□□□□ -1.18
USP47-201ENST00000305481 PRR5LQ6MZQ0 368 aa7.7□□□□□ -1.18
USP47-201ENST00000305481 LRSAM1Q6UWE0 723 aa7.7□□□□□ -1.18
USP47-201ENST00000305481 RAB11FIP4Q86YS3 637 aa7.7□□□□□ -1.18
USP47-201ENST00000305481 RIOK1Q9BRS2 568 aaKnown RBP7.7□□□□□ -1.18
USP47-201ENST00000305481 TFIP11Q9UBB9 837 aaKnown RBP7.7□□□□□ -1.18
USP47-201ENST00000305481 SLC4A4Q9Y6R1 1079 aa7.7□□□□□ -1.18
USP47-201ENST00000305481 SLC27A3Q5K4L6 730 aa7.7□□□□□ -1.18
USP47-201ENST00000305481 FAM184AQ8NB25 1140 aa7.7□□□□□ -1.18
USP47-201ENST00000305481 IGDCC4Q8TDY8 1250 aa7.7□□□□□ -1.18
USP47-201ENST00000305481 ANKRD2Q9GZV1 360 aa7.7□□□□□ -1.18
USP47-201ENST00000305481 NAPBQ9H115 298 aa7.7□□□□□ -1.18
USP47-201ENST00000305481 SMIM22K7EJ46 135 aa7.7□□□□□ -1.18
USP47-201ENST00000305481 SH2B2O14492 632 aaPredicted RBP7.7□□□□□ -1.18
USP47-201ENST00000305481 ADD1P35611 737 aaKnown RBP7.7□□□□□ -1.18
USP47-201ENST00000305481 HMGN5P82970 282 aaKnown RBP7.7□□□□□ -1.18
USP47-201ENST00000305481 TRDNQ13061 729 aa7.7□□□□□ -1.18
USP47-201ENST00000305481 NAA16Q6N069 864 aaPredicted RBP7.7□□□□□ -1.18
USP47-201ENST00000305481 VPS37DQ86XT2 251 aa7.7□□□□□ -1.18
USP47-201ENST00000305481 CNBD1Q8NA66 436 aa7.7□□□□□ -1.18
USP47-201ENST00000305481 RAI14Q9P0K7 980 aa7.7□□□□□ -1.18
USP47-201ENST00000305481 ZSWIM5Q9P217 1185 aa7.7□□□□□ -1.18
USP47-201ENST00000305481 ANGEL1Q9UNK9 670 aaKnown RBP7.7□□□□□ -1.18
USP47-201ENST00000305481 GOLGA8BA8MQT2 603 aa7.69□□□□□ -1.18
USP47-201ENST00000305481 GNAT2P19087 354 aa7.69□□□□□ -1.18
USP47-201ENST00000305481 HIBADHP31937 336 aaKnown RBP7.69□□□□□ -1.18
USP47-201ENST00000305481 FOSBP53539 338 aa7.69□□□□□ -1.18
USP47-201ENST00000305481 KRT85P78386 507 aa7.69□□□□□ -1.18
USP47-201ENST00000305481 SDR42E1Q8WUS8 393 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms