RNA–Protein interactions for RNA: ENST00000303657.9

RFX2-201, Transcript of regulatory factor X2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RFX2, Length 3,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2-201ENST00000303657 USP42Q9H9J4 1324 aaKnown RBP12.37□□□□□ -0.43
RFX2-201ENST00000303657 PTPDC1A2A3K4 754 aa12.37□□□□□ -0.43
RFX2-201ENST00000303657 MAP3K12Q12852 859 aa12.37□□□□□ -0.43
RFX2-201ENST00000303657 CPLX2Q6PUV4 134 aaKnown RBP12.37□□□□□ -0.43
RFX2-201ENST00000303657 UBXN4Q92575 508 aa12.37□□□□□ -0.43
RFX2-201ENST00000303657 CCDC34Q96HJ3 373 aa12.37□□□□□ -0.43
RFX2-201ENST00000303657 SDF4Q9BRK5 362 aa12.37□□□□□ -0.43
RFX2-201ENST00000303657 HELLSQ9NRZ9 838 aa12.37□□□□□ -0.43
RFX2-201ENST00000303657 USP27XA6NNY8 438 aa12.37□□□□□ -0.43
RFX2-201ENST00000303657 FGAP02671 866 aa12.37□□□□□ -0.43
RFX2-201ENST00000303657 BCAMP50895 628 aa12.37□□□□□ -0.43
RFX2-201ENST00000303657 SUSD4Q5VX71 490 aa12.37□□□□□ -0.43
RFX2-201ENST00000303657 USP21Q9UK80 565 aa12.37□□□□□ -0.43
RFX2-201ENST00000303657 HMGB1P09429 215 aaKnown RBP12.36□□□□□ -0.43
RFX2-201ENST00000303657 CASP7P55210 303 aa12.36□□□□□ -0.43
RFX2-201ENST00000303657 CCDC152Q4G0S7 254 aa12.36□□□□□ -0.43
RFX2-201ENST00000303657 ARHGAP29Q52LW3 1261 aa12.36□□□□□ -0.43
RFX2-201ENST00000303657 CCDC102BQ68D86 513 aa12.36□□□□□ -0.43
RFX2-201ENST00000303657 MYL10Q9BUA6 226 aa12.36□□□□□ -0.43
RFX2-201ENST00000303657 ARGLU1Q9NWB6 273 aaPredicted RBP12.36□□□□□ -0.43
RFX2-201ENST00000303657 GNPATO15228 680 aa12.36□□□□□ -0.43
RFX2-201ENST00000303657 HNRNPH2P55795 449 aaKnown RBP12.36□□□□□ -0.43
RFX2-201ENST00000303657 GPS2Q13227 327 aa12.36□□□□□ -0.43
RFX2-201ENST00000303657 TOB2Q14106 344 aaPredicted RBP12.36□□□□□ -0.43
RFX2-201ENST00000303657 TMCO3Q6UWJ1 677 aa12.36□□□□□ -0.43
RFX2-201ENST00000303657 CCDC73Q6ZRK6 1079 aa12.36□□□□□ -0.43
RFX2-201ENST00000303657 SLC4A9Q96Q91 983 aa12.36□□□□□ -0.43
RFX2-201ENST00000303657 WWC3Q9ULE0 1092 aa12.36□□□□□ -0.43
RFX2-201ENST00000303657 ZNF652Q9Y2D9 606 aa12.36□□□□□ -0.43
RFX2-201ENST00000303657 CCDC69A6NI79 296 aa12.36□□□□□ -0.43
RFX2-201ENST00000303657 ZNF75DP51815 510 aa12.36□□□□□ -0.43
RFX2-201ENST00000303657 BMS1Q14692 1282 aaKnown RBP12.36□□□□□ -0.43
RFX2-201ENST00000303657 STK38Q15208 465 aa12.36□□□□□ -0.43
RFX2-201ENST00000303657 SYT10Q6XYQ8 523 aa12.36□□□□□ -0.43
RFX2-201ENST00000303657 ARMT1Q9H993 441 aa12.36□□□□□ -0.43
RFX2-201ENST00000303657 ORC3Q9UBD5 711 aaPredicted RBP12.36□□□□□ -0.43
RFX2-201ENST00000303657 ZNF532Q9HCE3 1301 aa12.36□□□□□ -0.43
RFX2-201ENST00000303657 URI1O94763 535 aaPredicted RBP12.35□□□□□ -0.43
RFX2-201ENST00000303657 SLU7O95391 586 aaKnown RBP12.35□□□□□ -0.43
RFX2-201ENST00000303657 INCENPQ9NQS7 918 aa12.35□□□□□ -0.43
RFX2-201ENST00000303657 ADAMTSL3P82987 1691 aa12.35□□□□□ -0.43
RFX2-201ENST00000303657 SLIT3O75094 1523 aa12.35□□□□□ -0.43
RFX2-201ENST00000303657 COL5A2P05997 1499 aaPredicted RBP12.35□□□□□ -0.43
RFX2-201ENST00000303657 B4E1Z4 1266 aa12.35□□□□□ -0.43
RFX2-201ENST00000303657 MBD4O95243 580 aa12.35□□□□□ -0.43
RFX2-201ENST00000303657 NKX1-1Q15270 411 aaPredicted RBP12.35□□□□□ -0.43
RFX2-201ENST00000303657 ZMYM1Q5SVZ6 1142 aa12.35□□□□□ -0.43
RFX2-201ENST00000303657 STOX1Q6ZVD7 989 aa12.35□□□□□ -0.43
RFX2-201ENST00000303657 NCOA7Q8NI08 942 aa12.35□□□□□ -0.43
RFX2-201ENST00000303657 C8orf76Q96K31 380 aa12.35□□□□□ -0.43
RFX2-201ENST00000303657 FTOQ9C0B1 505 aaKnown RBP eCLIP12.35□□□□□ -0.43
RFX2-201ENST00000303657 RSPH14Q9UHP6 348 aa12.35□□□□□ -0.43
RFX2-201ENST00000303657 ERICH2A1L162 156 aa12.35□□□□□ -0.43
RFX2-201ENST00000303657 EPB41L2O43491 1005 aaKnown RBP12.35□□□□□ -0.43
RFX2-201ENST00000303657 MCAMP43121 646 aa12.35□□□□□ -0.43
RFX2-201ENST00000303657 SCRN1Q12765 414 aa12.35□□□□□ -0.43
RFX2-201ENST00000303657 TRIM29Q14134 588 aa12.35□□□□□ -0.43
RFX2-201ENST00000303657 NBPF5PQ86XG9 351 aaPredicted RBP12.35□□□□□ -0.43
RFX2-201ENST00000303657 APPBP2Q92624 585 aa12.35□□□□□ -0.43
RFX2-201ENST00000303657 ZSWIM4Q9H7M6 989 aa12.35□□□□□ -0.43
RFX2-201ENST00000303657 ZNF219Q9P2Y4 722 aaPredicted RBP12.35□□□□□ -0.43
RFX2-201ENST00000303657 IFIT3O14879 490 aaKnown RBP12.34□□□□□ -0.43
RFX2-201ENST00000303657 PDE8BO95263 885 aa12.34□□□□□ -0.43
RFX2-201ENST00000303657 SNW1Q13573 536 aaKnown RBP12.34□□□□□ -0.43
RFX2-201ENST00000303657 KRBA2Q6ZNG9 492 aa12.34□□□□□ -0.43
RFX2-201ENST00000303657 ZNF609O15014 1411 aa12.34□□□□□ -0.43
RFX2-201ENST00000303657 DCCP43146 1447 aa12.34□□□□□ -0.43
RFX2-201ENST00000303657 RAD21O60216 631 aa12.34□□□□□ -0.43
RFX2-201ENST00000303657 ZFYP08048 801 aaPredicted RBP12.34□□□□□ -0.43
RFX2-201ENST00000303657 LMAN1P49257 510 aa12.34□□□□□ -0.43
RFX2-201ENST00000303657 SCAND2PQ9GZW5 306 aaPredicted RBP12.34□□□□□ -0.43
RFX2-201ENST00000303657 ISM2Q6H9L7 571 aa12.34□□□□□ -0.43
RFX2-201ENST00000303657 TTC6Q86TZ1 520 aa12.34□□□□□ -0.43
RFX2-201ENST00000303657 KLHL34Q8N239 644 aa12.34□□□□□ -0.43
RFX2-201ENST00000303657 GJB4Q9NTQ9 266 aa12.34□□□□□ -0.43
RFX2-201ENST00000303657 DHX16O60231 1041 aaKnown RBP12.33□□□□□ -0.44
RFX2-201ENST00000303657 IL6STP40189 918 aaPredicted RBP12.33□□□□□ -0.44
RFX2-201ENST00000303657 GYG1P46976 350 aa12.33□□□□□ -0.44
RFX2-201ENST00000303657 CTDSPL2Q05D32 466 aa12.33□□□□□ -0.44
RFX2-201ENST00000303657 PUM3Q15397 648 aaKnown RBP12.33□□□□□ -0.44
RFX2-201ENST00000303657 GPATCH11Q8N954 259 aa12.33□□□□□ -0.44
RFX2-201ENST00000303657 MARCH10Q8NA82 808 aaPredicted RBP12.33□□□□□ -0.44
RFX2-201ENST00000303657 NACAP1Q9BZK3 213 aa12.33□□□□□ -0.44
RFX2-201ENST00000303657 MRVI1Q9Y6F6 885 aa12.33□□□□□ -0.44
RFX2-201ENST00000303657 CTIFO43310 598 aaKnown RBP12.33□□□□□ -0.44
RFX2-201ENST00000303657 CYP7A1P22680 504 aa12.33□□□□□ -0.44
RFX2-201ENST00000303657 RFC4P35249 363 aa12.33□□□□□ -0.44
RFX2-201ENST00000303657 CCDC144BQ3MJ40 725 aa12.33□□□□□ -0.44
RFX2-201ENST00000303657 ANKRD18AQ8IVF6 992 aa12.33□□□□□ -0.44
RFX2-201ENST00000303657 SLC4A4Q9Y6R1 1079 aa12.33□□□□□ -0.44
RFX2-201ENST00000303657 KINO60870 393 aaKnown RBP12.33□□□□□ -0.44
RFX2-201ENST00000303657 TMEM67Q5HYA8 995 aa12.33□□□□□ -0.44
RFX2-201ENST00000303657 GNL3LQ9NVN8 582 aaKnown RBP12.33□□□□□ -0.44
RFX2-201ENST00000303657 DNAI1Q9UI46 699 aa12.33□□□□□ -0.44
RFX2-201ENST00000303657 CFAP45Q9UL16 551 aa12.33□□□□□ -0.44
RFX2-201ENST00000303657 BIN1O00499 593 aa12.32□□□□□ -0.44
RFX2-201ENST00000303657 CIAO1O76071 339 aa12.32□□□□□ -0.44
RFX2-201ENST00000303657 TTF1Q15361 905 aaPredicted RBP12.32□□□□□ -0.44
RFX2-201ENST00000303657 PIH1D3Q9NQM4 214 aaKnown RBP12.32□□□□□ -0.44
RFX2-201ENST00000303657 TFCP2L1Q9NZI6 479 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms