RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 OSBP2Q969R2 916 aa11.5□□□□□ -0.57
RFX3-201ENST00000302303 FAM163AQ96GL9 167 aaPredicted RBP11.5□□□□□ -0.57
RFX3-201ENST00000302303 FAM227BQ96M60 508 aa11.5□□□□□ -0.57
RFX3-201ENST00000302303 SEC62Q99442 399 aaKnown RBP11.5□□□□□ -0.57
RFX3-201ENST00000302303 POTECB2RU33 542 aa11.5□□□□□ -0.57
RFX3-201ENST00000302303 LDHBP07195 334 aaKnown RBP11.5□□□□□ -0.57
RFX3-201ENST00000302303 SCNN1DP51172 638 aa11.5□□□□□ -0.57
RFX3-201ENST00000302303 EIF6P56537 245 aaKnown RBP11.5□□□□□ -0.57
RFX3-201ENST00000302303 TNIP1Q15025 636 aa11.5□□□□□ -0.57
RFX3-201ENST00000302303 UBE3CQ15386 1083 aa11.5□□□□□ -0.57
RFX3-201ENST00000302303 ZMYM1Q5SVZ6 1142 aa11.5□□□□□ -0.57
RFX3-201ENST00000302303 SLC9C2Q5TAH2 1124 aa11.5□□□□□ -0.57
RFX3-201ENST00000302303 ERICH6Q7L0X2 663 aa11.5□□□□□ -0.57
RFX3-201ENST00000302303 TICAM2Q86XR7 235 aa11.5□□□□□ -0.57
RFX3-201ENST00000302303 KIAA0825Q8IV33 1275 aa11.5□□□□□ -0.57
RFX3-201ENST00000302303 GPC2Q8N158 579 aa11.5□□□□□ -0.57
RFX3-201ENST00000302303 AGBL3Q8NEM8 1001 aa11.5□□□□□ -0.57
RFX3-201ENST00000302303 DPF2Q92785 391 aa11.5□□□□□ -0.57
RFX3-201ENST00000302303 FBXW7Q969H0 707 aa11.5□□□□□ -0.57
RFX3-201ENST00000302303 MRIQ9BWK5 157 aa11.5□□□□□ -0.57
RFX3-201ENST00000302303 PUS7LQ9H0K6 701 aaKnown RBP11.5□□□□□ -0.57
RFX3-201ENST00000302303 LRP2BPQ9P2M1 347 aa11.5□□□□□ -0.57
RFX3-201ENST00000302303 RFX7Q2KHR2 1363 aa11.49□□□□□ -0.57
RFX3-201ENST00000302303 GAKO14976 1311 aa11.49□□□□□ -0.57
RFX3-201ENST00000302303 ZNF532Q9HCE3 1301 aa11.49□□□□□ -0.57
RFX3-201ENST00000302303 ZC3H4Q9UPT8 1303 aaKnown RBP11.49□□□□□ -0.57
RFX3-201ENST00000302303 A0A0D9SFI3 127 aa11.49□□□□□ -0.57
RFX3-201ENST00000302303 F8W031 263 aaPredicted RBP11.49□□□□□ -0.57
RFX3-201ENST00000302303 RNF113AO15541 343 aaKnown RBP11.49□□□□□ -0.57
RFX3-201ENST00000302303 IGSF3O75054 1194 aa11.49□□□□□ -0.57
RFX3-201ENST00000302303 EGFRP00533 1210 aa11.49□□□□□ -0.57
RFX3-201ENST00000302303 GMPSP49915 693 aaPredicted RBP11.49□□□□□ -0.57
RFX3-201ENST00000302303 ZNF280AP59817 542 aaPredicted RBP11.49□□□□□ -0.57
RFX3-201ENST00000302303 C8orf34Q49A92 452 aa11.49□□□□□ -0.57
RFX3-201ENST00000302303 ZGPATQ8N5A5 531 aaKnown RBP11.49□□□□□ -0.57
RFX3-201ENST00000302303 MAGEB6Q8N7X4 407 aa11.49□□□□□ -0.57
RFX3-201ENST00000302303 ZBED3Q96IU2 234 aaPredicted RBP11.49□□□□□ -0.57
RFX3-201ENST00000302303 FSD1Q9BTV5 496 aa11.49□□□□□ -0.57
RFX3-201ENST00000302303 RAI14Q9P0K7 980 aa11.49□□□□□ -0.57
RFX3-201ENST00000302303 TTF2Q9UNY4 1162 aaKnown RBP11.49□□□□□ -0.57
RFX3-201ENST00000302303 ADAMTSL1Q8N6G6 1762 aa11.48□□□□□ -0.57
RFX3-201ENST00000302303 MYO3BQ8WXR4 1341 aa11.48□□□□□ -0.57
RFX3-201ENST00000302303 GLTPD2A6NH11 291 aa11.48□□□□□ -0.57
RFX3-201ENST00000302303 FOXP2O15409 715 aa11.48□□□□□ -0.57
RFX3-201ENST00000302303 RPS12P25398 132 aaKnown RBP11.48□□□□□ -0.57
RFX3-201ENST00000302303 MAP3K12Q12852 859 aa11.48□□□□□ -0.57
RFX3-201ENST00000302303 NMIQ13287 307 aaPredicted RBP11.48□□□□□ -0.57
RFX3-201ENST00000302303 SPTY2D1Q68D10 685 aaPredicted RBP11.48□□□□□ -0.57
RFX3-201ENST00000302303 APOBEC3HQ6NTF7 200 aaKnown RBP11.48□□□□□ -0.57
RFX3-201ENST00000302303 RIOK1Q9BRS2 568 aaKnown RBP11.48□□□□□ -0.57
RFX3-201ENST00000302303 GJA3Q9Y6H8 435 aa11.48□□□□□ -0.57
RFX3-201ENST00000302303 GPR75-ASB3A0A0A6YYF3 556 aa11.47□□□□□ -0.57
RFX3-201ENST00000302303 M0R2C6 588 aa11.47□□□□□ -0.57
RFX3-201ENST00000302303 CYP7A1P22680 504 aa11.47□□□□□ -0.57
RFX3-201ENST00000302303 PPP4CP60510 307 aa11.47□□□□□ -0.57
RFX3-201ENST00000302303 HDLBPQ00341 1268 aaKnown RBP11.47□□□□□ -0.57
RFX3-201ENST00000302303 NAA16Q6N069 864 aaPredicted RBP11.47□□□□□ -0.57
RFX3-201ENST00000302303 HHIPL2Q6UWX4 724 aa11.47□□□□□ -0.57
RFX3-201ENST00000302303 ZNF589Q86UQ0 364 aaPredicted RBP11.47□□□□□ -0.57
RFX3-201ENST00000302303 L3MBTL3Q96JM7 780 aaPredicted RBP11.47□□□□□ -0.57
RFX3-201ENST00000302303 PRMT6Q96LA8 375 aaPredicted RBP11.47□□□□□ -0.57
RFX3-201ENST00000302303 GPRC5DQ9NZD1 345 aa11.47□□□□□ -0.57
RFX3-201ENST00000302303 DAGLAQ9Y4D2 1042 aa11.47□□□□□ -0.57
RFX3-201ENST00000302303 MAST3O60307 1309 aa11.46□□□□□ -0.57
RFX3-201ENST00000302303 MYH7P12883 1935 aa11.46□□□□□ -0.57
RFX3-201ENST00000302303 SEC24BO95487 1268 aa11.46□□□□□ -0.57
RFX3-201ENST00000302303 ZFYP08048 801 aaPredicted RBP11.46□□□□□ -0.57
RFX3-201ENST00000302303 USP17L8P0C7I0 530 aa11.46□□□□□ -0.57
RFX3-201ENST00000302303 EPS15P42566 896 aa11.46□□□□□ -0.57
RFX3-201ENST00000302303 CRKP46108 304 aa11.46□□□□□ -0.57
RFX3-201ENST00000302303 RHBDL3P58872 404 aa11.46□□□□□ -0.57
RFX3-201ENST00000302303 DYNLL1P63167 89 aaKnown RBP11.46□□□□□ -0.57
RFX3-201ENST00000302303 MTMR14Q8NCE2 650 aa11.46□□□□□ -0.57
RFX3-201ENST00000302303 APPBP2Q92624 585 aa11.46□□□□□ -0.57
RFX3-201ENST00000302303 ZDHHC15Q96MV8 337 aa11.46□□□□□ -0.57
RFX3-201ENST00000302303 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.46□□□□□ -0.57
RFX3-201ENST00000302303 CNOT7Q9UIV1 285 aaKnown RBP11.46□□□□□ -0.57
RFX3-201ENST00000302303 SERPINA10Q9UK55 444 aa11.46□□□□□ -0.57
RFX3-201ENST00000302303 MAST2Q6P0Q8 1798 aa11.46□□□□□ -0.58
RFX3-201ENST00000302303 AK9Q5TCS8 1911 aa11.46□□□□□ -0.58
RFX3-201ENST00000302303 MROH7-TTC4A0A0A0MT08 1334 aa11.46□□□□□ -0.58
RFX3-201ENST00000302303 SGSM2O43147 1006 aa11.45□□□□□ -0.58
RFX3-201ENST00000302303 CDC45O75419 566 aa11.45□□□□□ -0.58
RFX3-201ENST00000302303 HIRAP54198 1017 aaPredicted RBP11.45□□□□□ -0.58
RFX3-201ENST00000302303 TMED8Q6PL24 325 aaPredicted RBP11.45□□□□□ -0.58
RFX3-201ENST00000302303 CWC27Q6UX04 472 aaKnown RBP11.45□□□□□ -0.58
RFX3-201ENST00000302303 CCDC129Q6ZRS4 1044 aa11.45□□□□□ -0.58
RFX3-201ENST00000302303 DZIP1Q86YF9 867 aaKnown RBP11.45□□□□□ -0.58
RFX3-201ENST00000302303 MICALL2Q8IY33 904 aa11.45□□□□□ -0.58
RFX3-201ENST00000302303 MIGA1Q8NAN2 632 aa11.45□□□□□ -0.58
RFX3-201ENST00000302303 STRBPQ96SI9 672 aaKnown RBP11.45□□□□□ -0.58
RFX3-201ENST00000302303 HELLSQ9NRZ9 838 aa11.45□□□□□ -0.58
RFX3-201ENST00000302303 MYH2Q9UKX2 1941 aa11.45□□□□□ -0.58
RFX3-201ENST00000302303 CFAP100Q494V2 611 aa11.45□□□□□ -0.58
RFX3-201ENST00000302303 MCMDC2Q4G0Z9 681 aa11.45□□□□□ -0.58
RFX3-201ENST00000302303 ZSCAN25Q6NSZ9 544 aa11.45□□□□□ -0.58
RFX3-201ENST00000302303 SAMD7Q7Z3H4 446 aa11.45□□□□□ -0.58
RFX3-201ENST00000302303 LCORLQ8N3X6 602 aa11.45□□□□□ -0.58
RFX3-201ENST00000302303 ESYT1Q9BSJ8 1104 aa11.45□□□□□ -0.58
RFX3-201ENST00000302303 MKRN1Q9UHC7 482 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms