RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 CCDC61Q9Y6R9 512 aa16.55■□□□□ 0.24
CDT1-201ENST00000301019 TTC41PQ6P2S7 1318 aa16.55■□□□□ 0.24
CDT1-201ENST00000301019 SSH2Q76I76 1423 aa16.55■□□□□ 0.24
CDT1-201ENST00000301019 ZSCAN12O43309 604 aa16.55■□□□□ 0.24
CDT1-201ENST00000301019 RPS6KB1P23443 525 aa16.55■□□□□ 0.24
CDT1-201ENST00000301019 CLASRPQ8N2M8 674 aaKnown RBP16.55■□□□□ 0.24
CDT1-201ENST00000301019 RABGGTAQ92696 567 aa16.55■□□□□ 0.24
CDT1-201ENST00000301019 NSD2O96028 1365 aa16.54■□□□□ 0.24
CDT1-201ENST00000301019 PNOCQ13519 176 aa16.54■□□□□ 0.24
CDT1-201ENST00000301019 KCNV1Q6PIU1 500 aa16.54■□□□□ 0.24
CDT1-201ENST00000301019 MRPS27Q92552 414 aaKnown RBP16.54■□□□□ 0.24
CDT1-201ENST00000301019 CAPZA3Q96KX2 299 aa16.54■□□□□ 0.24
CDT1-201ENST00000301019 PRR36Q9H6K5 1346 aa16.54■□□□□ 0.24
CDT1-201ENST00000301019 CCDC151A5D8V7 595 aa16.54■□□□□ 0.24
CDT1-201ENST00000301019 PAX7P23759 505 aa16.54■□□□□ 0.24
CDT1-201ENST00000301019 TAF7Q15545 349 aaPredicted RBP16.54■□□□□ 0.24
CDT1-201ENST00000301019 GBP6Q6ZN66 633 aa16.54■□□□□ 0.24
CDT1-201ENST00000301019 RSRC2Q7L4I2 434 aaKnown RBP16.54■□□□□ 0.24
CDT1-201ENST00000301019 DONSONQ9NYP3 566 aa16.54■□□□□ 0.24
CDT1-201ENST00000301019 IMPACTQ9P2X3 320 aa16.54■□□□□ 0.24
CDT1-201ENST00000301019 A0A0G2JLW4 131 aa16.53■□□□□ 0.24
CDT1-201ENST00000301019 PSMA5P28066 241 aa16.53■□□□□ 0.24
CDT1-201ENST00000301019 BIRC2Q13490 618 aa16.53■□□□□ 0.24
CDT1-201ENST00000301019 KCTD19Q17RG1 926 aaPredicted RBP16.53■□□□□ 0.24
CDT1-201ENST00000301019 ERC1Q8IUD2 1116 aa16.53■□□□□ 0.24
CDT1-201ENST00000301019 ZNF622Q969S3 477 aaKnown RBP eCLIP16.53■□□□□ 0.24
CDT1-201ENST00000301019 FAM169AQ9Y6X4 670 aa16.53■□□□□ 0.24
CDT1-201ENST00000301019 ENC1O14682 589 aa16.53■□□□□ 0.24
CDT1-201ENST00000301019 GPHNQ9NQX3 736 aaPredicted RBP16.53■□□□□ 0.24
CDT1-201ENST00000301019 PTPDC1A2A3K4 754 aa16.53■□□□□ 0.24
CDT1-201ENST00000301019 GOLIM4O00461 696 aa16.53■□□□□ 0.24
CDT1-201ENST00000301019 ATP2C2O75185 946 aa16.53■□□□□ 0.24
CDT1-201ENST00000301019 HSPA2P54652 639 aa16.53■□□□□ 0.24
CDT1-201ENST00000301019 IGSF22Q8N9C0 903 aa16.53■□□□□ 0.24
CDT1-201ENST00000301019 TFR2Q9UP52 801 aa16.53■□□□□ 0.24
CDT1-201ENST00000301019 ATP7BP35670 1465 aa16.52■□□□□ 0.24
CDT1-201ENST00000301019 CTAGE5O15320 804 aa16.52■□□□□ 0.24
CDT1-201ENST00000301019 NAIF1Q69YI7 327 aaPredicted RBP16.52■□□□□ 0.24
CDT1-201ENST00000301019 EFCAB13Q8IY85 973 aa16.52■□□□□ 0.24
CDT1-201ENST00000301019 BCAS4Q8TDM0 211 aa16.52■□□□□ 0.24
CDT1-201ENST00000301019 AFAP1L1Q8TED9 768 aa16.52■□□□□ 0.24
CDT1-201ENST00000301019 USP32Q8NFA0 1604 aa16.52■□□□□ 0.24
CDT1-201ENST00000301019 MAP2K7O14733 419 aa16.52■□□□□ 0.23
CDT1-201ENST00000301019 GLRX3O76003 335 aaKnown RBP16.52■□□□□ 0.23
CDT1-201ENST00000301019 CAVIN2O95810 425 aa16.52■□□□□ 0.23
CDT1-201ENST00000301019 ADD1P35611 737 aaKnown RBP16.52■□□□□ 0.23
CDT1-201ENST00000301019 GPIHBP1Q8IV16 184 aa16.52■□□□□ 0.23
CDT1-201ENST00000301019 CARD10Q9BWT7 1032 aa16.52■□□□□ 0.23
CDT1-201ENST00000301019 NCAPHQ15003 741 aa16.51■□□□□ 0.23
CDT1-201ENST00000301019 RNF217Q8TC41 542 aa16.51■□□□□ 0.23
CDT1-201ENST00000301019 COG3Q96JB2 828 aa16.51■□□□□ 0.23
CDT1-201ENST00000301019 ZEB2O60315 1214 aa16.51■□□□□ 0.23
CDT1-201ENST00000301019 ZNF202O95125 648 aa16.51■□□□□ 0.23
CDT1-201ENST00000301019 ENGASEQ8NFI3 743 aa16.51■□□□□ 0.23
CDT1-201ENST00000301019 N4BP2L2Q92802 583 aaPredicted RBP16.51■□□□□ 0.23
CDT1-201ENST00000301019 KAT14Q9H8E8 782 aa16.51■□□□□ 0.23
CDT1-201ENST00000301019 PPFIA4O75335 1185 aa16.51■□□□□ 0.23
CDT1-201ENST00000301019 LRCH2Q5VUJ6 765 aa16.51■□□□□ 0.23
CDT1-201ENST00000301019 MPHOSPH8Q99549 860 aa16.51■□□□□ 0.23
CDT1-201ENST00000301019 L1RE1Q9UN81 338 aa16.51■□□□□ 0.23
CDT1-201ENST00000301019 A0A087WUV0 522 aaPredicted RBP16.5■□□□□ 0.23
CDT1-201ENST00000301019 FOXN1O15353 648 aa16.5■□□□□ 0.23
CDT1-201ENST00000301019 ATP8B1O43520 1251 aa16.5■□□□□ 0.23
CDT1-201ENST00000301019 CUTAO60888 179 aa16.5■□□□□ 0.23
CDT1-201ENST00000301019 ERLIN1O75477 346 aa16.5■□□□□ 0.23
CDT1-201ENST00000301019 RPSAP08865 295 aaKnown RBP16.5■□□□□ 0.23
CDT1-201ENST00000301019 EIF4A2Q14240 407 aaKnown RBP16.5■□□□□ 0.23
CDT1-201ENST00000301019 MAP9Q49MG5 647 aa16.5■□□□□ 0.23
CDT1-201ENST00000301019 RNF187Q5TA31 235 aaPredicted RBP16.5■□□□□ 0.23
CDT1-201ENST00000301019 KLHL10Q6JEL2 608 aa16.5■□□□□ 0.23
CDT1-201ENST00000301019 PSD3Q9NYI0 1048 aa16.5■□□□□ 0.23
CDT1-201ENST00000301019 SRGAP2O75044 1071 aa16.5■□□□□ 0.23
CDT1-201ENST00000301019 E2F5Q15329 346 aa16.5■□□□□ 0.23
CDT1-201ENST00000301019 FMR1NBQ8N0W7 255 aaPredicted RBP16.5■□□□□ 0.23
CDT1-201ENST00000301019 CHD2O14647 1828 aaKnown RBP16.5■□□□□ 0.23
CDT1-201ENST00000301019 EBAG9O00559 213 aa16.49■□□□□ 0.23
CDT1-201ENST00000301019 INPP5BP32019 993 aa16.49■□□□□ 0.23
CDT1-201ENST00000301019 KIFC2Q96AC6 838 aa16.49■□□□□ 0.23
CDT1-201ENST00000301019 ECHDC1Q9NTX5 307 aa16.49■□□□□ 0.23
CDT1-201ENST00000301019 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.49■□□□□ 0.23
CDT1-201ENST00000301019 CPSF1Q10570 1443 aaKnown RBP16.49■□□□□ 0.23
CDT1-201ENST00000301019 PEX19P40855 299 aa16.49■□□□□ 0.23
CDT1-201ENST00000301019 ATP1A2P50993 1020 aa16.49■□□□□ 0.23
CDT1-201ENST00000301019 SRGAP1Q7Z6B7 1085 aa16.49■□□□□ 0.23
CDT1-201ENST00000301019 ACRBPQ8NEB7 543 aa16.49■□□□□ 0.23
CDT1-201ENST00000301019 RBM33Q96EV2 1170 aaKnown RBP16.49■□□□□ 0.23
CDT1-201ENST00000301019 EIF4E1BA6NMX2 242 aaKnown RBP16.49■□□□□ 0.23
CDT1-201ENST00000301019 MTHFSDQ2M296 383 aaKnown RBP16.49■□□□□ 0.23
CDT1-201ENST00000301019 NEK1Q96PY6 1258 aa16.49■□□□□ 0.23
CDT1-201ENST00000301019 HDAC6Q9UBN7 1215 aa16.49■□□□□ 0.23
CDT1-201ENST00000301019 STX17P56962 302 aa16.48■□□□□ 0.23
CDT1-201ENST00000301019 SLC35F6Q8N357 371 aa16.48■□□□□ 0.23
CDT1-201ENST00000301019 IQUBQ8NA54 791 aa16.48■□□□□ 0.23
CDT1-201ENST00000301019 MKRN1Q9UHC7 482 aaKnown RBP16.48■□□□□ 0.23
CDT1-201ENST00000301019 RCOR1Q9UKL0 485 aa16.48■□□□□ 0.23
CDT1-201ENST00000301019 CCP110O43303 1012 aa16.48■□□□□ 0.23
CDT1-201ENST00000301019 GGCXP38435 758 aa16.48■□□□□ 0.23
CDT1-201ENST00000301019 BRD3Q15059 726 aa16.48■□□□□ 0.23
CDT1-201ENST00000301019 PI4KAP2A4QPH2 592 aa16.47■□□□□ 0.23
CDT1-201ENST00000301019 ARHGAP6O43182 974 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms