RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 CHAF1AQ13111 956 aaPredicted RBP17.14■□□□□ 0.33
SMG8-201ENST00000300917 MICU3Q86XE3 530 aa17.14■□□□□ 0.33
SMG8-201ENST00000300917 RTCBQ9Y3I0 505 aaKnown RBP17.14■□□□□ 0.33
SMG8-201ENST00000300917 TDO2P48775 406 aa17.13■□□□□ 0.33
SMG8-201ENST00000300917 CKAP2LQ8IYA6 745 aa17.13■□□□□ 0.33
SMG8-201ENST00000300917 MB21D2Q8IYB1 491 aaPredicted RBP17.13■□□□□ 0.33
SMG8-201ENST00000300917 CCDC82Q8N4S0 544 aa17.13■□□□□ 0.33
SMG8-201ENST00000300917 BICD2Q8TD16 824 aa17.13■□□□□ 0.33
SMG8-201ENST00000300917 ARHGEF1Q92888 912 aaKnown RBP17.13■□□□□ 0.33
SMG8-201ENST00000300917 EPB41L4AQ9HCS5 686 aaPredicted RBP17.13■□□□□ 0.33
SMG8-201ENST00000300917 TCRBV5S4A2TA0A5A2 114 aa17.13■□□□□ 0.33
SMG8-201ENST00000300917 CYP7A1P22680 504 aa17.13■□□□□ 0.33
SMG8-201ENST00000300917 UBE3CQ15386 1083 aa17.13■□□□□ 0.33
SMG8-201ENST00000300917 CCDC183Q5T5S1 534 aa17.13■□□□□ 0.33
SMG8-201ENST00000300917 NFXL1Q6ZNB6 911 aa17.13■□□□□ 0.33
SMG8-201ENST00000300917 SLC4A4Q9Y6R1 1079 aa17.13■□□□□ 0.33
SMG8-201ENST00000300917 MINDY4BA8MYZ0 360 aa17.13■□□□□ 0.33
SMG8-201ENST00000300917 HSPA1LP34931 641 aa17.13■□□□□ 0.33
SMG8-201ENST00000300917 ADGRA1Q86SQ6 560 aa17.13■□□□□ 0.33
SMG8-201ENST00000300917 NEDD4P46934 1319 aa17.12■□□□□ 0.33
SMG8-201ENST00000300917 POLR3DP05423 398 aaPredicted RBP17.12■□□□□ 0.33
SMG8-201ENST00000300917 ADD1P35611 737 aaKnown RBP17.12■□□□□ 0.33
SMG8-201ENST00000300917 TMEM87AQ8NBN3 555 aa17.12■□□□□ 0.33
SMG8-201ENST00000300917 AIFM3Q96NN9 605 aa17.12■□□□□ 0.33
SMG8-201ENST00000300917 MINPP1Q9UNW1 487 aa17.12■□□□□ 0.33
SMG8-201ENST00000300917 FAM196AQ6ZSG2 479 aa17.12■□□□□ 0.33
SMG8-201ENST00000300917 FNBP4Q8N3X1 1017 aaPredicted RBP17.12■□□□□ 0.33
SMG8-201ENST00000300917 LEO1Q8WVC0 666 aaPredicted RBP17.12■□□□□ 0.33
SMG8-201ENST00000300917 TAF1P21675 1872 aa17.12■□□□□ 0.33
SMG8-201ENST00000300917 MYO5AQ9Y4I1 1855 aaKnown RBP17.12■□□□□ 0.33
SMG8-201ENST00000300917 IFNL3Q8IZI9 196 aa17.11■□□□□ 0.33
SMG8-201ENST00000300917 AK7Q96M32 723 aa17.11■□□□□ 0.33
SMG8-201ENST00000300917 RESTQ13127 1097 aa17.11■□□□□ 0.33
SMG8-201ENST00000300917 CLEC4GQ6UXB4 293 aa17.11■□□□□ 0.33
SMG8-201ENST00000300917 NLRP3Q96P20 1036 aa17.11■□□□□ 0.33
SMG8-201ENST00000300917 GPR101Q96P66 508 aaPredicted RBP17.11■□□□□ 0.33
SMG8-201ENST00000300917 AFF2P51816 1311 aa17.11■□□□□ 0.33
SMG8-201ENST00000300917 UBE2Q2LH0YL09 131 aa17.11■□□□□ 0.33
SMG8-201ENST00000300917 FDPSP14324 419 aaKnown RBP17.11■□□□□ 0.33
SMG8-201ENST00000300917 RFC4P35249 363 aa17.11■□□□□ 0.33
SMG8-201ENST00000300917 CSPP1Q1MSJ5 1256 aa17.11■□□□□ 0.33
SMG8-201ENST00000300917 PHKBQ93100 1093 aa17.11■□□□□ 0.33
SMG8-201ENST00000300917 CHMP4CQ96CF2 233 aa17.11■□□□□ 0.33
SMG8-201ENST00000300917 DACT1Q9NYF0 836 aa17.11■□□□□ 0.33
SMG8-201ENST00000300917 CYP2D7A0A087X1C5 515 aa17.1■□□□□ 0.33
SMG8-201ENST00000300917 RPS6KA4O75676 772 aa17.1■□□□□ 0.33
SMG8-201ENST00000300917 FAM43AQ8N2R8 423 aa17.1■□□□□ 0.33
SMG8-201ENST00000300917 SMARCC2Q8TAQ2 1214 aa17.1■□□□□ 0.33
SMG8-201ENST00000300917 ORC3Q9UBD5 711 aaPredicted RBP17.1■□□□□ 0.33
SMG8-201ENST00000300917 DYNLL1P63167 89 aaKnown RBP17.1■□□□□ 0.33
SMG8-201ENST00000300917 ZNF512BQ96KM6 892 aaPredicted RBP17.1■□□□□ 0.33
SMG8-201ENST00000300917 GJD4Q96KN9 370 aaPredicted RBP17.1■□□□□ 0.33
SMG8-201ENST00000300917 NARFQ9UHQ1 456 aa17.1■□□□□ 0.33
SMG8-201ENST00000300917 TACC3Q9Y6A5 838 aa17.1■□□□□ 0.33
SMG8-201ENST00000300917 MYH3P11055 1940 aa17.1■□□□□ 0.33
SMG8-201ENST00000300917 ANKRD36CQ5JPF3 1778 aa17.09■□□□□ 0.33
SMG8-201ENST00000300917 SEPT12Q8IYM1 358 aa17.09■□□□□ 0.33
SMG8-201ENST00000300917 HPS5Q9UPZ3 1129 aa17.09■□□□□ 0.33
SMG8-201ENST00000300917 WNK3Q9BYP7 1800 aa17.09■□□□□ 0.33
SMG8-201ENST00000300917 RPS8P62241 208 aaKnown RBP17.09■□□□□ 0.33
SMG8-201ENST00000300917 CCDC173Q0VFZ6 552 aa17.09■□□□□ 0.33
SMG8-201ENST00000300917 CMTR1Q8N1G2 835 aaKnown RBP17.09■□□□□ 0.33
SMG8-201ENST00000300917 AGXT2Q9BYV1 514 aa17.09■□□□□ 0.33
SMG8-201ENST00000300917 GSG1L2A8MUP6 293 aa17.09■□□□□ 0.33
SMG8-201ENST00000300917 ZNF274Q96GC6 653 aaPredicted RBP17.09■□□□□ 0.33
SMG8-201ENST00000300917 PGBD1Q96JS3 809 aa17.09■□□□□ 0.33
SMG8-201ENST00000300917 AKAP11Q9UKA4 1901 aa17.09■□□□□ 0.33
SMG8-201ENST00000300917 CAVIN4Q5BKX8 364 aa17.08■□□□□ 0.33
SMG8-201ENST00000300917 TXNRD3Q86VQ6 643 aa17.08■□□□□ 0.33
SMG8-201ENST00000300917 USP25Q9UHP3 1055 aa17.08■□□□□ 0.33
SMG8-201ENST00000300917 PATL2C9JE40 543 aaKnown RBP17.08■□□□□ 0.32
SMG8-201ENST00000300917 PRDM1O75626 825 aa17.08■□□□□ 0.32
SMG8-201ENST00000300917 TMEM67Q5HYA8 995 aa17.08■□□□□ 0.32
SMG8-201ENST00000300917 FBXW7Q969H0 707 aa17.08■□□□□ 0.32
SMG8-201ENST00000300917 USP28Q96RU2 1077 aa17.08■□□□□ 0.32
SMG8-201ENST00000300917 ESPNB1AK53 854 aa17.08■□□□□ 0.32
SMG8-201ENST00000300917 IFIT3O14879 490 aaKnown RBP17.08■□□□□ 0.32
SMG8-201ENST00000300917 HMGN5P82970 282 aaKnown RBP17.08■□□□□ 0.32
SMG8-201ENST00000300917 TPTE2Q6XPS3 522 aa17.08■□□□□ 0.32
SMG8-201ENST00000300917 CARMIL3Q8ND23 1372 aa17.08■□□□□ 0.32
SMG8-201ENST00000300917 SCAND2PQ9GZW5 306 aaPredicted RBP17.08■□□□□ 0.32
SMG8-201ENST00000300917 LRRC4BQ9NT99 713 aa17.08■□□□□ 0.32
SMG8-201ENST00000300917 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.08■□□□□ 0.32
SMG8-201ENST00000300917 ZSWIM5Q9P217 1185 aa17.08■□□□□ 0.32
SMG8-201ENST00000300917 NR1I2O75469 434 aa17.07■□□□□ 0.32
SMG8-201ENST00000300917 EVX2Q03828 476 aa17.07■□□□□ 0.32
SMG8-201ENST00000300917 FAM84BQ96KN1 310 aaPredicted RBP17.07■□□□□ 0.32
SMG8-201ENST00000300917 BSDC1Q9NW68 430 aaPredicted RBP17.07■□□□□ 0.32
SMG8-201ENST00000300917 A0A087WWV3 80 aa17.07■□□□□ 0.32
SMG8-201ENST00000300917 C8orf76Q96K31 380 aa17.07■□□□□ 0.32
SMG8-201ENST00000300917 LLPHQ9BRT6 129 aaKnown RBP17.07■□□□□ 0.32
SMG8-201ENST00000300917 ANGEL1Q9UNK9 670 aaKnown RBP17.07■□□□□ 0.32
SMG8-201ENST00000300917 CNTNAP4Q9C0A0 1308 aa17.06■□□□□ 0.32
SMG8-201ENST00000300917 METAP2P50579 478 aaKnown RBP eCLIP17.06■□□□□ 0.32
SMG8-201ENST00000300917 SF3B3Q15393 1217 aaKnown RBP17.06■□□□□ 0.32
SMG8-201ENST00000300917 TRAPPC3LQ5T215 181 aa17.06■□□□□ 0.32
SMG8-201ENST00000300917 ERCC4Q92889 916 aaPredicted RBP17.06■□□□□ 0.32
SMG8-201ENST00000300917 CDC27P30260 824 aa17.06■□□□□ 0.32
SMG8-201ENST00000300917 GNL3LQ9NVN8 582 aaKnown RBP17.06■□□□□ 0.32
SMG8-201ENST00000300917 LAMA4Q16363 1823 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms