RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 SENP2Q9HC62 589 aa15.05■□□□□ 0
HIF3A-204ENST00000300862 KIF28PB7ZC32 967 aa15.05■□□□□ -0
HIF3A-204ENST00000300862 ADD2P35612 726 aa15.05■□□□□ -0
HIF3A-204ENST00000300862 NDUFA8P51970 172 aa15.05■□□□□ -0
HIF3A-204ENST00000300862 ARID5BQ14865 1188 aa15.05■□□□□ -0
HIF3A-204ENST00000300862 SF3A1Q15459 793 aaKnown RBP15.05■□□□□ -0
HIF3A-204ENST00000300862 UTP14CQ5TAP6 766 aaKnown RBP15.05■□□□□ -0
HIF3A-204ENST00000300862 CYP19A1P11511 503 aaPredicted RBP15.04■□□□□ -0
HIF3A-204ENST00000300862 STK38Q15208 465 aa15.04■□□□□ -0
HIF3A-204ENST00000300862 STX1AQ16623 288 aa15.04■□□□□ -0
HIF3A-204ENST00000300862 ZSCAN25Q6NSZ9 544 aa15.04■□□□□ -0
HIF3A-204ENST00000300862 CYB5R4Q7L1T6 521 aa15.04■□□□□ -0
HIF3A-204ENST00000300862 SDF4Q9BRK5 362 aa15.04■□□□□ -0
HIF3A-204ENST00000300862 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.04■□□□□ -0
HIF3A-204ENST00000300862 BCL2L12Q9HB09 334 aa15.04■□□□□ -0
HIF3A-204ENST00000300862 WWC3Q9ULE0 1092 aa15.04■□□□□ -0
HIF3A-204ENST00000300862 CCDC102BQ68D86 513 aa15.04■□□□□ -0
HIF3A-204ENST00000300862 LINC00301Q8NCQ3 95 aa15.04■□□□□ -0
HIF3A-204ENST00000300862 FBXO18Q8NFZ0 1043 aa15.04■□□□□ -0
HIF3A-204ENST00000300862 CACTINQ8WUQ7 758 aaKnown RBP15.04■□□□□ -0
HIF3A-204ENST00000300862 RTEL1Q9NZ71 1219 aa15.04■□□□□ -0
HIF3A-204ENST00000300862 ZNF532Q9HCE3 1301 aa15.04■□□□□ -0
HIF3A-204ENST00000300862 BECN2A8MW95 431 aa15.03■□□□□ -0
HIF3A-204ENST00000300862 FMR1NBQ8N0W7 255 aaPredicted RBP15.03■□□□□ -0
HIF3A-204ENST00000300862 FBXL16Q8N461 479 aa15.03■□□□□ -0
HIF3A-204ENST00000300862 VGLL2Q8N8G2 317 aa15.03■□□□□ -0
HIF3A-204ENST00000300862 MRPS27Q92552 414 aaKnown RBP15.03■□□□□ -0
HIF3A-204ENST00000300862 B4E1Z4 1266 aa15.03■□□□□ -0
HIF3A-204ENST00000300862 CTAGE5O15320 804 aa15.03■□□□□ -0
HIF3A-204ENST00000300862 PDE8BO95263 885 aa15.03■□□□□ -0
HIF3A-204ENST00000300862 CBX1P83916 185 aa15.03■□□□□ -0
HIF3A-204ENST00000300862 SPEF2Q9C093 1822 aa15.03■□□□□ -0
HIF3A-204ENST00000300862 UBN2Q6ZU65 1347 aa15.02■□□□□ -0
HIF3A-204ENST00000300862 DHX16O60231 1041 aaKnown RBP15.02■□□□□ -0
HIF3A-204ENST00000300862 TRDNQ13061 729 aa15.02■□□□□ -0
HIF3A-204ENST00000300862 PPP4R3BQ5MIZ7 849 aa15.02■□□□□ -0
HIF3A-204ENST00000300862 ATL3Q6DD88 541 aa15.02■□□□□ -0
HIF3A-204ENST00000300862 DHX40Q8IX18 779 aaKnown RBP15.02■□□□□ -0
HIF3A-204ENST00000300862 PHKBQ93100 1093 aa15.02■□□□□ -0
HIF3A-204ENST00000300862 C16orf45Q96MC5 204 aaPredicted RBP15.02■□□□□ -0
HIF3A-204ENST00000300862 MYL10Q9BUA6 226 aa15.02■□□□□ -0
HIF3A-204ENST00000300862 CDHR2Q9BYE9 1310 aa15.02□□□□□ -0.01
HIF3A-204ENST00000300862 UBE2Q2LH0YL09 131 aa15.02□□□□□ -0.01
HIF3A-204ENST00000300862 PDE6AP16499 860 aa15.02□□□□□ -0.01
HIF3A-204ENST00000300862 MYSM1Q5VVJ2 828 aa15.02□□□□□ -0.01
HIF3A-204ENST00000300862 ADALQ6DHV7 355 aa15.02□□□□□ -0.01
HIF3A-204ENST00000300862 DZIP3Q86Y13 1208 aaKnown RBP15.02□□□□□ -0.01
HIF3A-204ENST00000300862 AOPEPQ8N6M6 819 aa15.02□□□□□ -0.01
HIF3A-204ENST00000300862 MYH15Q9Y2K3 1946 aa15.01□□□□□ -0.01
HIF3A-204ENST00000300862 BIN1O00499 593 aa15.01□□□□□ -0.01
HIF3A-204ENST00000300862 MARCKSP29966 332 aaPredicted RBP15.01□□□□□ -0.01
HIF3A-204ENST00000300862 MICU3Q86XE3 530 aa15.01□□□□□ -0.01
HIF3A-204ENST00000300862 STK11IPQ8N1F8 1099 aa15.01□□□□□ -0.01
HIF3A-204ENST00000300862 RIOK3O14730 519 aaKnown RBP15.01□□□□□ -0.01
HIF3A-204ENST00000300862 SPTLC2O15270 562 aa15.01□□□□□ -0.01
HIF3A-204ENST00000300862 FILIP1Q7Z7B0 1213 aa15.01□□□□□ -0.01
HIF3A-204ENST00000300862 HOMEZQ8IX15 550 aa15.01□□□□□ -0.01
HIF3A-204ENST00000300862 ANO10Q9NW15 660 aa15.01□□□□□ -0.01
HIF3A-204ENST00000300862 MYO5AQ9Y4I1 1855 aaKnown RBP15□□□□□ -0.01
HIF3A-204ENST00000300862 CDC27P30260 824 aa15□□□□□ -0.01
HIF3A-204ENST00000300862 SYNE3Q6ZMZ3 975 aa15□□□□□ -0.01
HIF3A-204ENST00000300862 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15□□□□□ -0.01
HIF3A-204ENST00000300862 ANGEL1Q9UNK9 670 aaKnown RBP15□□□□□ -0.01
HIF3A-204ENST00000300862 AKAP11Q9UKA4 1901 aa15□□□□□ -0.01
HIF3A-204ENST00000300862 NEDD4P46934 1319 aa15□□□□□ -0.01
HIF3A-204ENST00000300862 PDE8AO60658 829 aa15□□□□□ -0.01
HIF3A-204ENST00000300862 CAVIN2O95810 425 aa15□□□□□ -0.01
HIF3A-204ENST00000300862 METAP2P50579 478 aaKnown RBP eCLIP15□□□□□ -0.01
HIF3A-204ENST00000300862 KIF23Q02241 960 aaPredicted RBP15□□□□□ -0.01
HIF3A-204ENST00000300862 DPCR1Q3MIW9 517 aa15□□□□□ -0.01
HIF3A-204ENST00000300862 ISM2Q6H9L7 571 aa15□□□□□ -0.01
HIF3A-204ENST00000300862 CHMP4CQ96CF2 233 aa15□□□□□ -0.01
HIF3A-204ENST00000300862 CTDSPL2Q05D32 466 aa14.99□□□□□ -0.01
HIF3A-204ENST00000300862 AIDAQ96BJ3 306 aa14.99□□□□□ -0.01
HIF3A-204ENST00000300862 ALG1Q9BT22 464 aa14.99□□□□□ -0.01
HIF3A-204ENST00000300862 SEC31BQ9NQW1 1179 aa14.99□□□□□ -0.01
HIF3A-204ENST00000300862 TTF1Q15361 905 aaPredicted RBP14.99□□□□□ -0.01
HIF3A-204ENST00000300862 CEP57L1Q8IYX8 460 aa14.99□□□□□ -0.01
HIF3A-204ENST00000300862 KCNG4Q8TDN1 519 aa14.99□□□□□ -0.01
HIF3A-204ENST00000300862 TCRBV5S4A2TA0A5A2 114 aa14.98□□□□□ -0.01
HIF3A-204ENST00000300862 SH2B2O14492 632 aaPredicted RBP14.98□□□□□ -0.01
HIF3A-204ENST00000300862 WDHD1O75717 1129 aaPredicted RBP14.98□□□□□ -0.01
HIF3A-204ENST00000300862 CHAF1AQ13111 956 aaPredicted RBP14.98□□□□□ -0.01
HIF3A-204ENST00000300862 UBE3CQ15386 1083 aa14.98□□□□□ -0.01
HIF3A-204ENST00000300862 ANO1Q5XXA6 986 aa14.98□□□□□ -0.01
HIF3A-204ENST00000300862 APOA5Q6Q788 366 aa14.98□□□□□ -0.01
HIF3A-204ENST00000300862 NFXL1Q6ZNB6 911 aa14.98□□□□□ -0.01
HIF3A-204ENST00000300862 MAGEB6Q8N7X4 407 aa14.98□□□□□ -0.01
HIF3A-204ENST00000300862 STRBPQ96SI9 672 aaKnown RBP14.98□□□□□ -0.01
HIF3A-204ENST00000300862 POLR3EQ9NVU0 708 aa14.98□□□□□ -0.01
HIF3A-204ENST00000300862 BCL9O00512 1426 aa14.98□□□□□ -0.01
HIF3A-204ENST00000300862 A0A1W2PQ27 194 aa14.98□□□□□ -0.01
HIF3A-204ENST00000300862 A0A1W2PQ64 194 aa14.98□□□□□ -0.01
HIF3A-204ENST00000300862 A0A1W2PQD8 194 aa14.98□□□□□ -0.01
HIF3A-204ENST00000300862 RASGRF1Q13972 1273 aa14.98□□□□□ -0.01
HIF3A-204ENST00000300862 SARM1Q6SZW1 724 aa14.98□□□□□ -0.01
HIF3A-204ENST00000300862 ANKRD7Q92527 254 aa14.98□□□□□ -0.01
HIF3A-204ENST00000300862 ARMT1Q9H993 441 aa14.98□□□□□ -0.01
HIF3A-204ENST00000300862 KIAA1468Q9P260 1216 aa14.98□□□□□ -0.01
HIF3A-204ENST00000300862 ABCC12Q96J65 1359 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms