RNA–Protein interactions for RNA: ENST00000299855.9

MMP3-201, Transcript of matrix metallopeptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP3, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3-201ENST00000299855 ARNT2Q9HBZ2 717 aa10.58□□□□□ -0.72
MMP3-201ENST00000299855 ZNF69Q9UC07 566 aa10.58□□□□□ -0.72
MMP3-201ENST00000299855 KNDC1Q76NI1 1749 aa10.58□□□□□ -0.72
MMP3-201ENST00000299855 XRN1Q8IZH2 1706 aaKnown RBP10.58□□□□□ -0.72
MMP3-201ENST00000299855 ATF3P18847 181 aa10.58□□□□□ -0.72
MMP3-201ENST00000299855 TWISTNBQ3B726 338 aaPredicted RBP10.58□□□□□ -0.72
MMP3-201ENST00000299855 INO80DQ53TQ3 878 aaPredicted RBP10.58□□□□□ -0.72
MMP3-201ENST00000299855 LDLRAD1Q5T700 205 aa10.58□□□□□ -0.72
MMP3-201ENST00000299855 C16orf87Q6PH81 154 aa10.58□□□□□ -0.72
MMP3-201ENST00000299855 SSH2Q76I76 1423 aa10.57□□□□□ -0.72
MMP3-201ENST00000299855 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.57□□□□□ -0.72
MMP3-201ENST00000299855 A0A1W2PRQ8 180 aa10.57□□□□□ -0.72
MMP3-201ENST00000299855 KIF5CO60282 957 aa10.57□□□□□ -0.72
MMP3-201ENST00000299855 NBPF7P0C2Y1 421 aaPredicted RBP10.57□□□□□ -0.72
MMP3-201ENST00000299855 NOS2P35228 1153 aa10.57□□□□□ -0.72
MMP3-201ENST00000299855 ZNF131P52739 623 aa10.57□□□□□ -0.72
MMP3-201ENST00000299855 TMEM259Q4ZIN3 620 aa10.57□□□□□ -0.72
MMP3-201ENST00000299855 DZIP3Q86Y13 1208 aaKnown RBP10.57□□□□□ -0.72
MMP3-201ENST00000299855 RAVER1Q8IY67 606 aaKnown RBP10.57□□□□□ -0.72
MMP3-201ENST00000299855 METP08581 1390 aa10.57□□□□□ -0.72
MMP3-201ENST00000299855 CDC27P30260 824 aa10.57□□□□□ -0.72
MMP3-201ENST00000299855 PIK3CAP42336 1068 aa10.57□□□□□ -0.72
MMP3-201ENST00000299855 USP48Q86UV5 1035 aa10.57□□□□□ -0.72
MMP3-201ENST00000299855 C16orf71Q8IYS4 520 aaPredicted RBP10.57□□□□□ -0.72
MMP3-201ENST00000299855 CPSF1Q10570 1443 aaKnown RBP10.56□□□□□ -0.72
MMP3-201ENST00000299855 SETD1AO15047 1707 aaKnown RBP10.56□□□□□ -0.72
MMP3-201ENST00000299855 PHLPP1O60346 1717 aa10.56□□□□□ -0.72
MMP3-201ENST00000299855 TCHHQ07283 1943 aa10.56□□□□□ -0.72
MMP3-201ENST00000299855 SLC26A4O43511 780 aa10.56□□□□□ -0.72
MMP3-201ENST00000299855 MYL1P05976 194 aa10.56□□□□□ -0.72
MMP3-201ENST00000299855 CTHP32929 405 aa10.56□□□□□ -0.72
MMP3-201ENST00000299855 UBE2HP62256 183 aa10.56□□□□□ -0.72
MMP3-201ENST00000299855 NYAP1Q6ZVC0 841 aa10.56□□□□□ -0.72
MMP3-201ENST00000299855 TAS1R3Q7RTX0 852 aa10.56□□□□□ -0.72
MMP3-201ENST00000299855 POLR3CQ9BUI4 534 aaPredicted RBP10.56□□□□□ -0.72
MMP3-201ENST00000299855 GGNBP2Q9H3C7 697 aa10.56□□□□□ -0.72
MMP3-201ENST00000299855 TTC12Q9H892 705 aaPredicted RBP10.56□□□□□ -0.72
MMP3-201ENST00000299855 PPCSQ9HAB8 311 aa10.56□□□□□ -0.72
MMP3-201ENST00000299855 TFIP11Q9UBB9 837 aaKnown RBP10.56□□□□□ -0.72
MMP3-201ENST00000299855 SUN2Q9UH99 717 aa10.56□□□□□ -0.72
MMP3-201ENST00000299855 EVLQ9UI08 416 aaPredicted RBP10.56□□□□□ -0.72
MMP3-201ENST00000299855 DCCP43146 1447 aa10.56□□□□□ -0.72
MMP3-201ENST00000299855 ATP10DQ9P241 1426 aa10.56□□□□□ -0.72
MMP3-201ENST00000299855 PAX7P23759 505 aa10.55□□□□□ -0.72
MMP3-201ENST00000299855 PRKAR2BP31323 418 aa10.55□□□□□ -0.72
MMP3-201ENST00000299855 TRPC1P48995 793 aa10.55□□□□□ -0.72
MMP3-201ENST00000299855 TMEM164Q5U3C3 297 aa10.55□□□□□ -0.72
MMP3-201ENST00000299855 CEP85Q6P2H3 762 aa10.55□□□□□ -0.72
MMP3-201ENST00000299855 HDGFL2Q7Z4V5 671 aaPredicted RBP10.55□□□□□ -0.72
MMP3-201ENST00000299855 TSPYL6Q8N831 410 aa10.55□□□□□ -0.72
MMP3-201ENST00000299855 SMARCC1Q92922 1105 aaPredicted RBP10.55□□□□□ -0.72
MMP3-201ENST00000299855 PDGFDQ9GZP0 370 aaPredicted RBP10.55□□□□□ -0.72
MMP3-201ENST00000299855 ACBD3Q9H3P7 528 aa10.55□□□□□ -0.72
MMP3-201ENST00000299855 CD248Q9HCU0 757 aa10.55□□□□□ -0.72
MMP3-201ENST00000299855 MAFFQ9ULX9 164 aa10.55□□□□□ -0.72
MMP3-201ENST00000299855 ATP6V1DQ9Y5K8 247 aa10.55□□□□□ -0.72
MMP3-201ENST00000299855 GJA3Q9Y6H8 435 aa10.55□□□□□ -0.72
MMP3-201ENST00000299855 ERICH4A6NGS2 130 aa10.55□□□□□ -0.72
MMP3-201ENST00000299855 MYL3P08590 195 aa10.55□□□□□ -0.72
MMP3-201ENST00000299855 TNNI2P48788 182 aa10.55□□□□□ -0.72
MMP3-201ENST00000299855 TMEM132EQ6IEE7 984 aa10.55□□□□□ -0.72
MMP3-201ENST00000299855 OTUD6AQ7L8S5 288 aa10.55□□□□□ -0.72
MMP3-201ENST00000299855 IWS1Q96ST2 819 aa10.55□□□□□ -0.72
MMP3-201ENST00000299855 FUCA2Q9BTY2 467 aa10.55□□□□□ -0.72
MMP3-201ENST00000299855 MBIPQ9NS73 344 aa10.55□□□□□ -0.72
MMP3-201ENST00000299855 IP6K2Q9UHH9 426 aa10.55□□□□□ -0.72
MMP3-201ENST00000299855 RGS12O14924 1447 aa10.55□□□□□ -0.72
MMP3-201ENST00000299855 JCADQ9P266 1359 aa10.54□□□□□ -0.72
MMP3-201ENST00000299855 CABP2Q9NPB3 220 aa10.54□□□□□ -0.72
MMP3-201ENST00000299855 FBXO2Q9UK22 296 aaPredicted RBP10.54□□□□□ -0.72
MMP3-201ENST00000299855 MRPS23Q9Y3D9 190 aaKnown RBP10.54□□□□□ -0.72
MMP3-201ENST00000299855 CEP83Q9Y592 693 aa10.54□□□□□ -0.72
MMP3-201ENST00000299855 PTPRCP08575 1304 aa10.54□□□□□ -0.72
MMP3-201ENST00000299855 CTAGE5O15320 804 aa10.53□□□□□ -0.72
MMP3-201ENST00000299855 HELQQ8TDG4 1101 aa10.53□□□□□ -0.72
MMP3-201ENST00000299855 ESYT1Q9BSJ8 1104 aa10.53□□□□□ -0.72
MMP3-201ENST00000299855 CGNQ9P2M7 1197 aaKnown RBP10.53□□□□□ -0.72
MMP3-201ENST00000299855 PAXBP1Q9Y5B6 917 aa10.53□□□□□ -0.72
MMP3-201ENST00000299855 RPAP1Q9BWH6 1393 aaPredicted RBP10.53□□□□□ -0.72
MMP3-201ENST00000299855 KIF20BQ96Q89 1820 aa10.53□□□□□ -0.72
MMP3-201ENST00000299855 COL16A1Q07092 1604 aaPredicted RBP10.53□□□□□ -0.72
MMP3-201ENST00000299855 AHDC1Q5TGY3 1603 aaPredicted RBP10.53□□□□□ -0.72
MMP3-201ENST00000299855 GADD45BO75293 160 aaPredicted RBP10.53□□□□□ -0.72
MMP3-201ENST00000299855 PDE1AP54750 535 aa10.53□□□□□ -0.72
MMP3-201ENST00000299855 CAMK2BQ13554 666 aa10.53□□□□□ -0.72
MMP3-201ENST00000299855 TOMM20Q15388 145 aa10.53□□□□□ -0.72
MMP3-201ENST00000299855 PLEKHG4Q58EX7 1191 aa10.53□□□□□ -0.72
MMP3-201ENST00000299855 ARMC3Q5W041 872 aa10.53□□□□□ -0.72
MMP3-201ENST00000299855 ARHGEF25Q86VW2 580 aa10.53□□□□□ -0.72
MMP3-201ENST00000299855 IQCF2Q8IXL9 164 aa10.53□□□□□ -0.72
MMP3-201ENST00000299855 ENAMQ9NRM1 1142 aa10.53□□□□□ -0.72
MMP3-201ENST00000299855 TUBGCP6Q96RT7 1819 aa10.53□□□□□ -0.72
MMP3-201ENST00000299855 GRXCR2A6NFK2 248 aa10.52□□□□□ -0.73
MMP3-201ENST00000299855 TRIM6-TRIM34B2RNG4 842 aa10.52□□□□□ -0.73
MMP3-201ENST00000299855 GNPATO15228 680 aa10.52□□□□□ -0.73
MMP3-201ENST00000299855 HNRNPCP07910 306 aaKnown RBP eCLIP10.52□□□□□ -0.73
MMP3-201ENST00000299855 CCDC175P0C221 793 aa10.52□□□□□ -0.73
MMP3-201ENST00000299855 TSPAN7P41732 249 aa10.52□□□□□ -0.73
MMP3-201ENST00000299855 MFSD10Q14728 455 aa10.52□□□□□ -0.73
MMP3-201ENST00000299855 MFSD4BQ5TF39 518 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms