RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 DHX16O60231 1041 aaKnown RBP15.59■□□□□ 0.09
CTDP1-202ENST00000299543 RRP12Q5JTH9 1297 aaKnown RBP15.59■□□□□ 0.09
CTDP1-202ENST00000299543 GREM2Q9H772 168 aa15.59■□□□□ 0.09
CTDP1-202ENST00000299543 ITGA6P23229 1130 aa15.59■□□□□ 0.09
CTDP1-202ENST00000299543 HLFQ16534 295 aa15.59■□□□□ 0.09
CTDP1-202ENST00000299543 KLHL34Q8N239 644 aa15.59■□□□□ 0.09
CTDP1-202ENST00000299543 TBC1D2BQ9UPU7 963 aa15.59■□□□□ 0.09
CTDP1-202ENST00000299543 CCDC69A6NI79 296 aa15.58■□□□□ 0.09
CTDP1-202ENST00000299543 USP27XA6NNY8 438 aa15.58■□□□□ 0.09
CTDP1-202ENST00000299543 ERVV-2B6SEH9 535 aa15.58■□□□□ 0.09
CTDP1-202ENST00000299543 CCDC112Q8NEF3 446 aa15.58■□□□□ 0.09
CTDP1-202ENST00000299543 NEK11Q8NG66 645 aa15.58■□□□□ 0.09
CTDP1-202ENST00000299543 APPBP2Q92624 585 aa15.58■□□□□ 0.09
CTDP1-202ENST00000299543 FEZ2Q9UHY8 353 aaPredicted RBP15.58■□□□□ 0.09
CTDP1-202ENST00000299543 TRMT112Q9UI30 125 aaKnown RBP15.58■□□□□ 0.09
CTDP1-202ENST00000299543 ATP2B1P20020 1258 aa15.58■□□□□ 0.08
CTDP1-202ENST00000299543 DPCR1Q3MIW9 517 aa15.58■□□□□ 0.08
CTDP1-202ENST00000299543 LRRC8AQ8IWT6 810 aa15.58■□□□□ 0.08
CTDP1-202ENST00000299543 NAT10Q9H0A0 1025 aaKnown RBP15.58■□□□□ 0.08
CTDP1-202ENST00000299543 B4E1Z4 1266 aa15.58■□□□□ 0.08
CTDP1-202ENST00000299543 WDR17Q8IZU2 1322 aa15.57■□□□□ 0.08
CTDP1-202ENST00000299543 SLC3A2P08195 630 aaKnown RBP15.57■□□□□ 0.08
CTDP1-202ENST00000299543 HSP90AA4PQ58FG1 418 aa15.57■□□□□ 0.08
CTDP1-202ENST00000299543 LINC00301Q8NCQ3 95 aa15.57■□□□□ 0.08
CTDP1-202ENST00000299543 FBXO18Q8NFZ0 1043 aa15.57■□□□□ 0.08
CTDP1-202ENST00000299543 MCAMP43121 646 aa15.57■□□□□ 0.08
CTDP1-202ENST00000299543 PTPN21Q16825 1174 aa15.57■□□□□ 0.08
CTDP1-202ENST00000299543 KRT222Q8N1A0 295 aa15.57■□□□□ 0.08
CTDP1-202ENST00000299543 ENGASEQ8NFI3 743 aa15.57■□□□□ 0.08
CTDP1-202ENST00000299543 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.57■□□□□ 0.08
CTDP1-202ENST00000299543 MORC2Q9Y6X9 1032 aaPredicted RBP15.57■□□□□ 0.08
CTDP1-202ENST00000299543 KIF28PB7ZC32 967 aa15.56■□□□□ 0.08
CTDP1-202ENST00000299543 TULP2O00295 520 aa15.56■□□□□ 0.08
CTDP1-202ENST00000299543 CIAO1O76071 339 aa15.56■□□□□ 0.08
CTDP1-202ENST00000299543 ZFYP08048 801 aaPredicted RBP15.56■□□□□ 0.08
CTDP1-202ENST00000299543 LMOD1P29536 600 aaPredicted RBP15.56■□□□□ 0.08
CTDP1-202ENST00000299543 RBM6P78332 1123 aaKnown RBP15.56■□□□□ 0.08
CTDP1-202ENST00000299543 ELF2Q15723 593 aa15.56■□□□□ 0.08
CTDP1-202ENST00000299543 MYSM1Q5VVJ2 828 aa15.56■□□□□ 0.08
CTDP1-202ENST00000299543 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.56■□□□□ 0.08
CTDP1-202ENST00000299543 ALG1Q9BT22 464 aa15.56■□□□□ 0.08
CTDP1-202ENST00000299543 RFX7Q2KHR2 1363 aa15.56■□□□□ 0.08
CTDP1-202ENST00000299543 METAP2P50579 478 aaKnown RBP eCLIP15.56■□□□□ 0.08
CTDP1-202ENST00000299543 ANTXR2P58335 489 aa15.56■□□□□ 0.08
CTDP1-202ENST00000299543 CEP135Q66GS9 1140 aa15.56■□□□□ 0.08
CTDP1-202ENST00000299543 ADALQ6DHV7 355 aa15.56■□□□□ 0.08
CTDP1-202ENST00000299543 FBXO38Q6PIJ6 1188 aa15.56■□□□□ 0.08
CTDP1-202ENST00000299543 DHX40Q8IX18 779 aaKnown RBP15.56■□□□□ 0.08
CTDP1-202ENST00000299543 SENP2Q9HC62 589 aa15.56■□□□□ 0.08
CTDP1-202ENST00000299543 TRIM66O15016 1216 aa15.56■□□□□ 0.08
CTDP1-202ENST00000299543 FOXP2O15409 715 aa15.56■□□□□ 0.08
CTDP1-202ENST00000299543 CAVIN2O95810 425 aa15.56■□□□□ 0.08
CTDP1-202ENST00000299543 PRR29P0C7W0 189 aa15.56■□□□□ 0.08
CTDP1-202ENST00000299543 RAD51AP2Q09MP3 1159 aa15.56■□□□□ 0.08
CTDP1-202ENST00000299543 TMC6Q7Z403 805 aa15.56■□□□□ 0.08
CTDP1-202ENST00000299543 ISCA1Q9BUE6 129 aa15.56■□□□□ 0.08
CTDP1-202ENST00000299543 AGXT2Q9BYV1 514 aa15.56■□□□□ 0.08
CTDP1-202ENST00000299543 IFNKQ9P0W0 207 aa15.56■□□□□ 0.08
CTDP1-202ENST00000299543 ZNF215Q9UL58 517 aaPredicted RBP15.56■□□□□ 0.08
CTDP1-202ENST00000299543 ZNF202O95125 648 aa15.55■□□□□ 0.08
CTDP1-202ENST00000299543 STARD3NLO95772 234 aa15.55■□□□□ 0.08
CTDP1-202ENST00000299543 PTPN14Q15678 1187 aa15.55■□□□□ 0.08
CTDP1-202ENST00000299543 FMR1NBQ8N0W7 255 aaPredicted RBP15.55■□□□□ 0.08
CTDP1-202ENST00000299543 NKX2-3Q8TAU0 364 aa15.55■□□□□ 0.08
CTDP1-202ENST00000299543 MST1RQ04912 1400 aa15.55■□□□□ 0.08
CTDP1-202ENST00000299543 ANKRD18BA2A2Z9 1011 aa15.55■□□□□ 0.08
CTDP1-202ENST00000299543 UBE2Q2LH0YL09 131 aa15.55■□□□□ 0.08
CTDP1-202ENST00000299543 POLR3GO15318 223 aaPredicted RBP15.55■□□□□ 0.08
CTDP1-202ENST00000299543 SPECC1Q5M775 1068 aa15.55■□□□□ 0.08
CTDP1-202ENST00000299543 BRINP3Q76B58 766 aa15.55■□□□□ 0.08
CTDP1-202ENST00000299543 AIDAQ96BJ3 306 aa15.55■□□□□ 0.08
CTDP1-202ENST00000299543 RTEL1Q9NZ71 1219 aa15.55■□□□□ 0.08
CTDP1-202ENST00000299543 KIAA1468Q9P260 1216 aa15.55■□□□□ 0.08
CTDP1-202ENST00000299543 HPS5Q9UPZ3 1129 aa15.55■□□□□ 0.08
CTDP1-202ENST00000299543 AFDNP55196 1824 aaKnown RBP15.55■□□□□ 0.08
CTDP1-202ENST00000299543 IRS4O14654 1257 aaPredicted RBP15.55■□□□□ 0.08
CTDP1-202ENST00000299543 PHKA1P46020 1223 aa15.55■□□□□ 0.08
CTDP1-202ENST00000299543 PIGBQ92521 554 aa15.55■□□□□ 0.08
CTDP1-202ENST00000299543 ZKSCAN3Q9BRR0 538 aa15.55■□□□□ 0.08
CTDP1-202ENST00000299543 ANO1Q5XXA6 986 aa15.54■□□□□ 0.08
CTDP1-202ENST00000299543 EP400NLQ6ZTU2 488 aa15.54■□□□□ 0.08
CTDP1-202ENST00000299543 MB21D2Q8IYB1 491 aaPredicted RBP15.54■□□□□ 0.08
CTDP1-202ENST00000299543 KCNG4Q8TDN1 519 aa15.54■□□□□ 0.08
CTDP1-202ENST00000299543 RSPH14Q9UHP6 348 aa15.54■□□□□ 0.08
CTDP1-202ENST00000299543 TNS3Q68CZ2 1445 aa15.54■□□□□ 0.08
CTDP1-202ENST00000299543 ZBTB38Q8NAP3 1195 aaPredicted RBP15.54■□□□□ 0.08
CTDP1-202ENST00000299543 PIH1D3Q9NQM4 214 aaKnown RBP15.54■□□□□ 0.08
CTDP1-202ENST00000299543 IQSEC3Q9UPP2 1182 aaPredicted RBP15.54■□□□□ 0.08
CTDP1-202ENST00000299543 ZNF532Q9HCE3 1301 aa15.54■□□□□ 0.08
CTDP1-202ENST00000299543 SALL1Q9NSC2 1324 aa15.54■□□□□ 0.08
CTDP1-202ENST00000299543 CPLX2Q6PUV4 134 aaKnown RBP15.53■□□□□ 0.08
CTDP1-202ENST00000299543 CYB5R4Q7L1T6 521 aa15.53■□□□□ 0.08
CTDP1-202ENST00000299543 TBC1D10CQ8IV04 446 aa15.53■□□□□ 0.08
CTDP1-202ENST00000299543 DHX37Q8IY37 1157 aaKnown RBP15.53■□□□□ 0.08
CTDP1-202ENST00000299543 CLIC6Q96NY7 704 aa15.53■□□□□ 0.08
CTDP1-202ENST00000299543 XPO4Q9C0E2 1151 aaKnown RBP15.53■□□□□ 0.08
CTDP1-202ENST00000299543 LOC102724159A0A0B4J2E5 919 aa15.53■□□□□ 0.08
CTDP1-202ENST00000299543 PCCAP05165 728 aaPredicted RBP15.53■□□□□ 0.08
CTDP1-202ENST00000299543 CTDSPL2Q05D32 466 aa15.53■□□□□ 0.08
CTDP1-202ENST00000299543 PWP2Q15269 919 aaKnown RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms