RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 MAP3K11Q16584 847 aa11.8□□□□□ -0.52
FOXN4-201ENST00000299162 ISM2Q6H9L7 571 aa11.8□□□□□ -0.52
FOXN4-201ENST00000299162 MYRIPQ8NFW9 859 aa11.8□□□□□ -0.52
FOXN4-201ENST00000299162 USP28Q96RU2 1077 aa11.8□□□□□ -0.52
FOXN4-201ENST00000299162 GTPBP4Q9BZE4 634 aaKnown RBP11.8□□□□□ -0.52
FOXN4-201ENST00000299162 BCL2L12Q9HB09 334 aa11.8□□□□□ -0.52
FOXN4-201ENST00000299162 ORC3Q9UBD5 711 aaPredicted RBP11.8□□□□□ -0.52
FOXN4-201ENST00000299162 SMIM22K7EJ46 135 aa11.8□□□□□ -0.52
FOXN4-201ENST00000299162 FOXP2O15409 715 aa11.8□□□□□ -0.52
FOXN4-201ENST00000299162 PDE6AP16499 860 aa11.8□□□□□ -0.52
FOXN4-201ENST00000299162 GYG1P46976 350 aa11.8□□□□□ -0.52
FOXN4-201ENST00000299162 RASGRF1Q13972 1273 aa11.8□□□□□ -0.52
FOXN4-201ENST00000299162 HS1BP3Q53T59 392 aa11.8□□□□□ -0.52
FOXN4-201ENST00000299162 VPS37DQ86XT2 251 aa11.8□□□□□ -0.52
FOXN4-201ENST00000299162 HMGB1P09429 215 aaKnown RBP11.79□□□□□ -0.52
FOXN4-201ENST00000299162 TERF1P54274 439 aa11.79□□□□□ -0.52
FOXN4-201ENST00000299162 LRRFIP1Q32MZ4 808 aaKnown RBP11.79□□□□□ -0.52
FOXN4-201ENST00000299162 ANO6Q4KMQ2 910 aa11.79□□□□□ -0.52
FOXN4-201ENST00000299162 TBC1D10CQ8IV04 446 aa11.79□□□□□ -0.52
FOXN4-201ENST00000299162 SCAND2PQ9GZW5 306 aaPredicted RBP11.79□□□□□ -0.52
FOXN4-201ENST00000299162 DNAJC25Q9H1X3 360 aa11.79□□□□□ -0.52
FOXN4-201ENST00000299162 CTNNA3Q9UI47 895 aa11.79□□□□□ -0.52
FOXN4-201ENST00000299162 PFKFB2O60825 505 aa11.79□□□□□ -0.52
FOXN4-201ENST00000299162 CCDC192P0DO97 292 aa11.79□□□□□ -0.52
FOXN4-201ENST00000299162 MCM5P33992 734 aa11.79□□□□□ -0.52
FOXN4-201ENST00000299162 IGHMBP2P38935 993 aaKnown RBP11.79□□□□□ -0.52
FOXN4-201ENST00000299162 TDO2P48775 406 aa11.79□□□□□ -0.52
FOXN4-201ENST00000299162 TSGA10IPQ3SY00 556 aa11.79□□□□□ -0.52
FOXN4-201ENST00000299162 PIBF1Q8WXW3 757 aa11.79□□□□□ -0.52
FOXN4-201ENST00000299162 XIRP1Q702N8 1843 aaKnown RBP11.79□□□□□ -0.52
FOXN4-201ENST00000299162 IL6STP40189 918 aaPredicted RBP11.79□□□□□ -0.52
FOXN4-201ENST00000299162 TRIM28Q13263 835 aaKnown RBP11.79□□□□□ -0.52
FOXN4-201ENST00000299162 INTS5Q6P9B9 1019 aaKnown RBP11.79□□□□□ -0.52
FOXN4-201ENST00000299162 CNPY4Q8N129 248 aa11.79□□□□□ -0.52
FOXN4-201ENST00000299162 NCOA7Q8NI08 942 aa11.79□□□□□ -0.52
FOXN4-201ENST00000299162 NAPBQ9H115 298 aa11.79□□□□□ -0.52
FOXN4-201ENST00000299162 RAI14Q9P0K7 980 aa11.79□□□□□ -0.52
FOXN4-201ENST00000299162 BCL9O00512 1426 aa11.79□□□□□ -0.52
FOXN4-201ENST00000299162 PALLDQ8WX93 1383 aa11.78□□□□□ -0.52
FOXN4-201ENST00000299162 SRCAPQ6ZRS2 3230 aa11.78□□□□□ -0.52
FOXN4-201ENST00000299162 RESTQ13127 1097 aa11.78□□□□□ -0.52
FOXN4-201ENST00000299162 C3orf67Q6ZVT6 689 aa11.78□□□□□ -0.52
FOXN4-201ENST00000299162 SLC51AQ86UW1 340 aa11.78□□□□□ -0.52
FOXN4-201ENST00000299162 SPATA5Q8NB90 893 aa11.78□□□□□ -0.52
FOXN4-201ENST00000299162 C8orf76Q96K31 380 aa11.78□□□□□ -0.52
FOXN4-201ENST00000299162 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.78□□□□□ -0.52
FOXN4-201ENST00000299162 SRP68Q9UHB9 627 aaKnown RBP11.78□□□□□ -0.52
FOXN4-201ENST00000299162 MTMR7Q9Y216 660 aa11.78□□□□□ -0.52
FOXN4-201ENST00000299162 V9GYY5 206 aaPredicted RBP11.78□□□□□ -0.52
FOXN4-201ENST00000299162 SLC5A1P13866 664 aa11.78□□□□□ -0.52
FOXN4-201ENST00000299162 MARCKSP29966 332 aaPredicted RBP11.78□□□□□ -0.52
FOXN4-201ENST00000299162 EXOSC10Q01780 885 aaKnown RBP11.78□□□□□ -0.52
FOXN4-201ENST00000299162 TYRO3Q06418 890 aa11.78□□□□□ -0.52
FOXN4-201ENST00000299162 PUM3Q15397 648 aaKnown RBP11.78□□□□□ -0.52
FOXN4-201ENST00000299162 CCAR1Q8IX12 1150 aaKnown RBP11.78□□□□□ -0.52
FOXN4-201ENST00000299162 TMEM87AQ8NBN3 555 aa11.78□□□□□ -0.52
FOXN4-201ENST00000299162 NUP133Q8WUM0 1156 aa11.78□□□□□ -0.52
FOXN4-201ENST00000299162 SDR42E1Q8WUS8 393 aa11.78□□□□□ -0.52
FOXN4-201ENST00000299162 ADAMTS7Q9UKP4 1686 aa11.78□□□□□ -0.52
FOXN4-201ENST00000299162 A0A1B0GVL5 298 aa11.78□□□□□ -0.52
FOXN4-201ENST00000299162 BIN1O00499 593 aa11.78□□□□□ -0.52
FOXN4-201ENST00000299162 RIOK3O14730 519 aaKnown RBP11.78□□□□□ -0.52
FOXN4-201ENST00000299162 ADD2P35612 726 aa11.78□□□□□ -0.52
FOXN4-201ENST00000299162 NAA30Q147X3 362 aaPredicted RBP11.78□□□□□ -0.52
FOXN4-201ENST00000299162 CYB5R4Q7L1T6 521 aa11.78□□□□□ -0.52
FOXN4-201ENST00000299162 C16orf45Q96MC5 204 aaPredicted RBP11.78□□□□□ -0.52
FOXN4-201ENST00000299162 AP5Z1O43299 807 aa11.77□□□□□ -0.53
FOXN4-201ENST00000299162 PRDM1O75626 825 aa11.77□□□□□ -0.53
FOXN4-201ENST00000299162 ANTXR2P58335 489 aa11.77□□□□□ -0.53
FOXN4-201ENST00000299162 ERFEQ4G0M1 354 aa11.77□□□□□ -0.53
FOXN4-201ENST00000299162 PKD1L3Q7Z443 1732 aa11.77□□□□□ -0.53
FOXN4-201ENST00000299162 hCG_1642624A0A1W2PR95 340 aa11.77□□□□□ -0.53
FOXN4-201ENST00000299162 ZFYP08048 801 aaPredicted RBP11.77□□□□□ -0.53
FOXN4-201ENST00000299162 EIF5P55010 431 aaKnown RBP11.77□□□□□ -0.53
FOXN4-201ENST00000299162 TNS2Q63HR2 1409 aa11.77□□□□□ -0.53
FOXN4-201ENST00000299162 STK38Q15208 465 aa11.76□□□□□ -0.53
FOXN4-201ENST00000299162 FSIP1Q8NA03 581 aa11.76□□□□□ -0.53
FOXN4-201ENST00000299162 LPIN2Q92539 896 aa11.76□□□□□ -0.53
FOXN4-201ENST00000299162 TFCP2L1Q9NZI6 479 aa11.76□□□□□ -0.53
FOXN4-201ENST00000299162 SLC4A4Q9Y6R1 1079 aa11.76□□□□□ -0.53
FOXN4-201ENST00000299162 STRCQ7RTU9 1775 aa11.76□□□□□ -0.53
FOXN4-201ENST00000299162 CYP2D7A0A087X1C5 515 aa11.76□□□□□ -0.53
FOXN4-201ENST00000299162 FDPSP14324 419 aaKnown RBP11.76□□□□□ -0.53
FOXN4-201ENST00000299162 HMGN5P82970 282 aaKnown RBP11.76□□□□□ -0.53
FOXN4-201ENST00000299162 CHRNDQ07001 517 aa11.76□□□□□ -0.53
FOXN4-201ENST00000299162 MAP3K12Q12852 859 aa11.76□□□□□ -0.53
FOXN4-201ENST00000299162 CCDC152Q4G0S7 254 aa11.76□□□□□ -0.53
FOXN4-201ENST00000299162 TMEM67Q5HYA8 995 aa11.76□□□□□ -0.53
FOXN4-201ENST00000299162 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.76□□□□□ -0.53
FOXN4-201ENST00000299162 SDF4Q9BRK5 362 aa11.76□□□□□ -0.53
FOXN4-201ENST00000299162 RIC1Q4ADV7 1423 aa11.76□□□□□ -0.53
FOXN4-201ENST00000299162 IFIT3O14879 490 aaKnown RBP11.76□□□□□ -0.53
FOXN4-201ENST00000299162 CCDC73Q6ZRK6 1079 aa11.76□□□□□ -0.53
FOXN4-201ENST00000299162 ZNF34Q8IZ26 560 aa11.76□□□□□ -0.53
FOXN4-201ENST00000299162 LCORLQ8N3X6 602 aa11.76□□□□□ -0.53
FOXN4-201ENST00000299162 TRIM5Q9C035 493 aa11.76□□□□□ -0.53
FOXN4-201ENST00000299162 CFAP45Q9UL16 551 aa11.76□□□□□ -0.53
FOXN4-201ENST00000299162 CRYBG1Q9Y4K1 1723 aa11.76□□□□□ -0.53
FOXN4-201ENST00000299162 MYCNP04198 464 aaPredicted RBP11.75□□□□□ -0.53
FOXN4-201ENST00000299162 NEDD4P46934 1319 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms