RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 GADL1Q6ZQY3 521 aa7.84□□□□□ -1.15
GAPVD1-202ENST00000297933 IL27Q8NEV9 243 aa7.84□□□□□ -1.15
GAPVD1-202ENST00000297933 DDX12PQ92771 950 aa7.84□□□□□ -1.15
GAPVD1-202ENST00000297933 ERVV-2B6SEH9 535 aa7.84□□□□□ -1.15
GAPVD1-202ENST00000297933 URI1O94763 535 aaPredicted RBP7.84□□□□□ -1.15
GAPVD1-202ENST00000297933 TRIM37O94972 964 aa7.84□□□□□ -1.15
GAPVD1-202ENST00000297933 KIAA0753Q2KHM9 967 aa7.84□□□□□ -1.15
GAPVD1-202ENST00000297933 FAM196AQ6ZSG2 479 aa7.84□□□□□ -1.15
GAPVD1-202ENST00000297933 CDAN1Q8IWY9 1227 aa7.84□□□□□ -1.15
GAPVD1-202ENST00000297933 SREK1Q8WXA9 508 aaKnown RBP7.84□□□□□ -1.15
GAPVD1-202ENST00000297933 CNKSR1Q969H4 720 aa7.84□□□□□ -1.15
GAPVD1-202ENST00000297933 FNBP1Q96RU3 617 aa7.84□□□□□ -1.15
GAPVD1-202ENST00000297933 PAGR1Q9BTK6 254 aa7.84□□□□□ -1.15
GAPVD1-202ENST00000297933 MROH5Q6ZUA9 1318 aa7.84□□□□□ -1.15
GAPVD1-202ENST00000297933 EDC4Q6P2E9 1401 aaKnown RBP7.84□□□□□ -1.15
GAPVD1-202ENST00000297933 COL17A1Q9UMD9 1497 aaPredicted RBP7.84□□□□□ -1.15
GAPVD1-202ENST00000297933 CCDC169A6NNP5 214 aa7.84□□□□□ -1.15
GAPVD1-202ENST00000297933 SSFA2P28290 1259 aa7.84□□□□□ -1.15
GAPVD1-202ENST00000297933 XAGE2Q96GT9 111 aa7.84□□□□□ -1.15
GAPVD1-202ENST00000297933 PIK3C2GO75747 1445 aa7.84□□□□□ -1.16
GAPVD1-202ENST00000297933 ZBTB24O43167 697 aaPredicted RBP7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 MARCKSP29966 332 aaPredicted RBP7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 DNM2P50570 870 aa7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 SMC1AQ14683 1233 aaKnown RBP7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 DCAF15Q66K64 600 aa7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 ZNF526Q8TF50 670 aaPredicted RBP7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 ATP7AQ04656 1500 aa7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 SPECC1Q5M775 1068 aa7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 LPIN2Q92539 896 aa7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 GOLGA1Q92805 767 aa7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 GDPD2Q9HCC8 539 aa7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 USP40Q9NVE5 1235 aa7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 BABAM1Q9NWV8 329 aa7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 TMEM110-MUSTN1A8MSY1 372 aa7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 PRPHP41219 470 aa7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 GSDMDP57764 484 aa7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 GTF2IP78347 998 aa7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 APOBRQ0VD83 1088 aa7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 HDAC1Q13547 482 aaPredicted RBP7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 FAM47CQ5HY64 1035 aa7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 NSMFQ6X4W1 530 aa7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 NLGN1Q8N2Q7 840 aa7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 RNF34Q969K3 372 aa7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 GLT8D2Q9H1C3 349 aa7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 SLC1A4P43007 532 aa7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 KRT24Q2M2I5 525 aa7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 LETM2Q2VYF4 491 aa7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 WDR44Q5JSH3 913 aa7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 DHX37Q8IY37 1157 aaKnown RBP7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 PPP1R14CQ8TAE6 165 aa7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 TEKT1Q969V4 418 aa7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 BICDL2A1A5D9 508 aa7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 RXRAP19793 462 aa7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 BIRC3Q13489 604 aa7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 BMS1Q14692 1282 aaKnown RBP7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 KRT27Q7Z3Y8 459 aa7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 ZNF594Q96JF6 807 aaPredicted RBP7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 GTPBP4Q9BZE4 634 aaKnown RBP7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 JADE2Q9NQC1 790 aa7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 TTF2Q9UNY4 1162 aaKnown RBP7.83□□□□□ -1.16
GAPVD1-202ENST00000297933 YEATS2Q9ULM3 1422 aa7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 DDX39AO00148 427 aaKnown RBP7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 CCT6AP40227 531 aaKnown RBP7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 CCDC65Q8IXS2 484 aa7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 FRMD4BQ9Y2L6 1034 aa7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 ZSCAN22P10073 491 aaPredicted RBP7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 SPAG1Q07617 926 aa7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 USH1GQ495M9 461 aa7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 TGFBRAP1Q8WUH2 860 aa7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 LGR6Q9HBX8 967 aa7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 POLR3AO14802 1390 aaPredicted RBP7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 ATP2B4P23634 1241 aa7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 TIMM10P62072 90 aa7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 TRPC3Q13507 836 aa7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 KMT5BQ4FZB7 885 aa7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 CCDC50Q8IVM0 306 aa7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 MAPKAPK5Q8IW41 473 aa7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 HACE1Q8IYU2 909 aa7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 PROCA1Q8NCQ7 364 aaPredicted RBP7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 EHBP1Q8NDI1 1231 aa7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 PHACTR3Q96KR7 559 aa7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 PLIN2Q99541 437 aa7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 NACA2Q9H009 215 aa7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 CFAP74Q9C0B2 1584 aa7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 TMEM2Q9UHN6 1383 aa7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 CYLC1P35663 651 aaPredicted RBP7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 TNNI3KQ59H18 835 aa7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 GSTA5Q7RTV2 222 aa7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 KIF18AQ8NI77 898 aa7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 MRPS27Q92552 414 aaKnown RBP7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 EXOC7Q9UPT5 735 aa7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 STK24Q9Y6E0 443 aa7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 FPGT-TNNI3KV9GXZ4 949 aa7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 TCP10L2B9ZVM9 353 aa7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 RPL13P26373 211 aaKnown RBP7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 UBE2HP62256 183 aa7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 BIRC2Q13490 618 aa7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 CEP85Q6P2H3 762 aa7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 SV2BQ7L1I2 683 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms