RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 TRMT1Q9NXH9 659 aaKnown RBP18.14■□□□□ 0.49
UBAP1-201ENST00000297661 SH3TC1Q8TE82 1336 aa18.13■□□□□ 0.49
UBAP1-201ENST00000297661 SKILP12757 684 aa18.13■□□□□ 0.49
UBAP1-201ENST00000297661 CDC25BP30305 580 aa18.13■□□□□ 0.49
UBAP1-201ENST00000297661 KCNQ4P56696 695 aa18.13■□□□□ 0.49
UBAP1-201ENST00000297661 DDX19AQ9NUU7 478 aaKnown RBP18.13■□□□□ 0.49
UBAP1-201ENST00000297661 PFKFB2O60825 505 aa18.13■□□□□ 0.49
UBAP1-201ENST00000297661 BMS1Q14692 1282 aaKnown RBP18.13■□□□□ 0.49
UBAP1-201ENST00000297661 PI16Q6UXB8 463 aa18.13■□□□□ 0.49
UBAP1-201ENST00000297661 EYA2O00167 538 aa18.12■□□□□ 0.49
UBAP1-201ENST00000297661 RBM43Q6ZSC3 357 aaKnown RBP18.12■□□□□ 0.49
UBAP1-201ENST00000297661 OSBP2Q969R2 916 aa18.12■□□□□ 0.49
UBAP1-201ENST00000297661 GOLPH3LQ9H4A5 285 aa18.12■□□□□ 0.49
UBAP1-201ENST00000297661 ADD1P35611 737 aaKnown RBP18.12■□□□□ 0.49
UBAP1-201ENST00000297661 ZMYM1Q5SVZ6 1142 aa18.12■□□□□ 0.49
UBAP1-201ENST00000297661 USP28Q96RU2 1077 aa18.12■□□□□ 0.49
UBAP1-201ENST00000297661 NEMFO60524 1076 aa18.11■□□□□ 0.49
UBAP1-201ENST00000297661 IL15P40933 162 aaPredicted RBP18.11■□□□□ 0.49
UBAP1-201ENST00000297661 WASHC4Q2M389 1173 aa18.11■□□□□ 0.49
UBAP1-201ENST00000297661 SYNE4Q8N205 404 aa18.11■□□□□ 0.49
UBAP1-201ENST00000297661 SMARCC2Q8TAQ2 1214 aa18.11■□□□□ 0.49
UBAP1-201ENST00000297661 TSPYL1Q9H0U9 437 aa18.11■□□□□ 0.49
UBAP1-201ENST00000297661 SCARF1Q14162 830 aa18.11■□□□□ 0.49
UBAP1-201ENST00000297661 CCAR1Q8IX12 1150 aaKnown RBP18.11■□□□□ 0.49
UBAP1-201ENST00000297661 RNF113AO15541 343 aaKnown RBP18.1■□□□□ 0.49
UBAP1-201ENST00000297661 GORABQ5T7V8 394 aa18.1■□□□□ 0.49
UBAP1-201ENST00000297661 C11orf57Q6ZUT1 292 aaPredicted RBP18.1■□□□□ 0.49
UBAP1-201ENST00000297661 FAM89AQ96GI7 184 aa18.1■□□□□ 0.49
UBAP1-201ENST00000297661 HELLSQ9NRZ9 838 aa18.1■□□□□ 0.49
UBAP1-201ENST00000297661 GJB4Q9NTQ9 266 aa18.1■□□□□ 0.49
UBAP1-201ENST00000297661 H2AFXP16104 143 aaPredicted RBP18.1■□□□□ 0.49
UBAP1-201ENST00000297661 EXOSC10Q01780 885 aaKnown RBP18.1■□□□□ 0.49
UBAP1-201ENST00000297661 FEZ2Q9UHY8 353 aaPredicted RBP18.1■□□□□ 0.49
UBAP1-201ENST00000297661 FHOD1Q9Y613 1164 aa18.1■□□□□ 0.49
UBAP1-201ENST00000297661 PKD1L3Q7Z443 1732 aa18.1■□□□□ 0.49
UBAP1-201ENST00000297661 PDIA3P30101 505 aaKnown RBP18.09■□□□□ 0.49
UBAP1-201ENST00000297661 ERCC6LQ2NKX8 1250 aa18.09■□□□□ 0.49
UBAP1-201ENST00000297661 CCAR2Q8N163 923 aaKnown RBP18.09■□□□□ 0.49
UBAP1-201ENST00000297661 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.09■□□□□ 0.49
UBAP1-201ENST00000297661 CFAP45Q9UL16 551 aa18.09■□□□□ 0.49
UBAP1-201ENST00000297661 CCDC69A6NI79 296 aa18.09■□□□□ 0.49
UBAP1-201ENST00000297661 GOLGA6L19H0YKK7 550 aa18.09■□□□□ 0.49
UBAP1-201ENST00000297661 DSCC1Q9BVC3 393 aa18.09■□□□□ 0.49
UBAP1-201ENST00000297661 PALLDQ8WX93 1383 aa18.09■□□□□ 0.49
UBAP1-201ENST00000297661 RAD51AP2Q09MP3 1159 aa18.08■□□□□ 0.49
UBAP1-201ENST00000297661 PIGBQ92521 554 aa18.08■□□□□ 0.49
UBAP1-201ENST00000297661 MRFAP1L1Q96HT8 127 aa18.08■□□□□ 0.49
UBAP1-201ENST00000297661 ZSCAN16Q9H4T2 348 aaPredicted RBP18.08■□□□□ 0.49
UBAP1-201ENST00000297661 ME1P48163 572 aa18.08■□□□□ 0.48
UBAP1-201ENST00000297661 CCZ1BP86790 482 aa18.08■□□□□ 0.48
UBAP1-201ENST00000297661 CCZ1P86791 482 aaPredicted RBP18.08■□□□□ 0.48
UBAP1-201ENST00000297661 FILIP1Q7Z7B0 1213 aa18.08■□□□□ 0.48
UBAP1-201ENST00000297661 CEP126Q9P2H0 1117 aa18.08■□□□□ 0.48
UBAP1-201ENST00000297661 ASAP1Q9ULH1 1129 aa18.08■□□□□ 0.48
UBAP1-201ENST00000297661 LAMA4Q16363 1823 aa18.08■□□□□ 0.48
UBAP1-201ENST00000297661 RFX7Q2KHR2 1363 aa18.07■□□□□ 0.48
UBAP1-201ENST00000297661 HMGB1P09429 215 aaKnown RBP18.07■□□□□ 0.48
UBAP1-201ENST00000297661 CLCN6P51797 869 aa18.07■□□□□ 0.48
UBAP1-201ENST00000297661 SARM1Q6SZW1 724 aa18.07■□□□□ 0.48
UBAP1-201ENST00000297661 CCDC57Q2TAC2 916 aa18.07■□□□□ 0.48
UBAP1-201ENST00000297661 TTC39AQ5SRH9 613 aa18.07■□□□□ 0.48
UBAP1-201ENST00000297661 XAGE2Q96GT9 111 aa18.07■□□□□ 0.48
UBAP1-201ENST00000297661 POLR3DP05423 398 aaPredicted RBP18.07■□□□□ 0.48
UBAP1-201ENST00000297661 IQCB1Q15051 598 aa18.07■□□□□ 0.48
UBAP1-201ENST00000297661 FAM196AQ6ZSG2 479 aa18.07■□□□□ 0.48
UBAP1-201ENST00000297661 CCDC191Q8NCU4 936 aa18.07■□□□□ 0.48
UBAP1-201ENST00000297661 DENND2AQ9ULE3 1009 aa18.07■□□□□ 0.48
UBAP1-201ENST00000297661 FOXP2O15409 715 aa18.06■□□□□ 0.48
UBAP1-201ENST00000297661 PNMA6AP0CW24 399 aaPredicted RBP18.06■□□□□ 0.48
UBAP1-201ENST00000297661 FDPSP14324 419 aaKnown RBP18.06■□□□□ 0.48
UBAP1-201ENST00000297661 TMOD3Q9NYL9 352 aa18.06■□□□□ 0.48
UBAP1-201ENST00000297661 CAVIN2O95810 425 aa18.06■□□□□ 0.48
UBAP1-201ENST00000297661 GPTP24298 496 aa18.06■□□□□ 0.48
UBAP1-201ENST00000297661 ZAP70P43403 619 aa18.06■□□□□ 0.48
UBAP1-201ENST00000297661 PLA2G4AP47712 749 aa18.06■□□□□ 0.48
UBAP1-201ENST00000297661 TAF7LQ5H9L4 462 aa18.06■□□□□ 0.48
UBAP1-201ENST00000297661 LLPHQ9BRT6 129 aaKnown RBP18.06■□□□□ 0.48
UBAP1-201ENST00000297661 PUS7LQ9H0K6 701 aaKnown RBP18.06■□□□□ 0.48
UBAP1-201ENST00000297661 TOGARAM1Q9Y4F4 1720 aa18.05■□□□□ 0.48
UBAP1-201ENST00000297661 DEFB132Q7Z7B7 95 aa18.05■□□□□ 0.48
UBAP1-201ENST00000297661 FSIP1Q8NA03 581 aa18.05■□□□□ 0.48
UBAP1-201ENST00000297661 LRRN4CLQ8ND94 238 aa18.05■□□□□ 0.48
UBAP1-201ENST00000297661 DOT1LQ8TEK3 1739 aa18.05■□□□□ 0.48
UBAP1-201ENST00000297661 KIF2AO00139 706 aaPredicted RBP18.05■□□□□ 0.48
UBAP1-201ENST00000297661 SNW1Q13573 536 aaKnown RBP18.05■□□□□ 0.48
UBAP1-201ENST00000297661 NAA16Q6N069 864 aaPredicted RBP18.05■□□□□ 0.48
UBAP1-201ENST00000297661 L2HGDHQ9H9P8 463 aa18.05■□□□□ 0.48
UBAP1-201ENST00000297661 RCOR1Q9UKL0 485 aa18.05■□□□□ 0.48
UBAP1-201ENST00000297661 NKX1-1Q15270 411 aaPredicted RBP18.04■□□□□ 0.48
UBAP1-201ENST00000297661 NEK11Q8NG66 645 aa18.04■□□□□ 0.48
UBAP1-201ENST00000297661 CARMIL3Q8ND23 1372 aa18.04■□□□□ 0.48
UBAP1-201ENST00000297661 A0A1B0GVL5 298 aa18.04■□□□□ 0.48
UBAP1-201ENST00000297661 FGAP02671 866 aa18.04■□□□□ 0.48
UBAP1-201ENST00000297661 CCDC158Q5M9N0 1113 aa18.04■□□□□ 0.48
UBAP1-201ENST00000297661 CCDC73Q6ZRK6 1079 aa18.04■□□□□ 0.48
UBAP1-201ENST00000297661 NKX2-3Q8TAU0 364 aa18.04■□□□□ 0.48
UBAP1-201ENST00000297661 GPR108Q9NPR9 543 aa18.04■□□□□ 0.48
UBAP1-201ENST00000297661 AGXT2Q9BYV1 514 aa18.03■□□□□ 0.48
UBAP1-201ENST00000297661 SALL1Q9NSC2 1324 aa18.03■□□□□ 0.48
UBAP1-201ENST00000297661 APBA3O96018 575 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms