RNA–Protein interactions for RNA: ENST00000296930.9

NPM1-201, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-201ENST00000296930 ZNF70Q9UC06 446 aaPredicted RBP20.37■□□□□ 0.85
NPM1-201ENST00000296930 SLC5A1P13866 664 aa20.36■□□□□ 0.85
NPM1-201ENST00000296930 CRKP46108 304 aa20.36■□□□□ 0.85
NPM1-201ENST00000296930 IRX6P78412 446 aaPredicted RBP20.36■□□□□ 0.85
NPM1-201ENST00000296930 HDLBPQ00341 1268 aaKnown RBP20.36■□□□□ 0.85
NPM1-201ENST00000296930 DGKZQ13574 1117 aa20.36■□□□□ 0.85
NPM1-201ENST00000296930 RASA3Q14644 834 aa20.36■□□□□ 0.85
NPM1-201ENST00000296930 LPIN2Q92539 896 aa20.36■□□□□ 0.85
NPM1-201ENST00000296930 MCOLN1Q9GZU1 580 aa20.36■□□□□ 0.85
NPM1-201ENST00000296930 SSC5DA1L4H1 1573 aa20.36■□□□□ 0.85
NPM1-201ENST00000296930 CIAO1O76071 339 aa20.36■□□□□ 0.85
NPM1-201ENST00000296930 TM4SF4P48230 202 aa20.36■□□□□ 0.85
NPM1-201ENST00000296930 ATG9AQ7Z3C6 839 aa20.36■□□□□ 0.85
NPM1-201ENST00000296930 TDRD3Q9H7E2 651 aaKnown RBP20.36■□□□□ 0.85
NPM1-201ENST00000296930 LRRFIP2Q9Y608 721 aaKnown RBP20.36■□□□□ 0.85
NPM1-201ENST00000296930 UNCXA6NJT0 531 aa20.35■□□□□ 0.85
NPM1-201ENST00000296930 SREBF2Q12772 1141 aa20.35■□□□□ 0.85
NPM1-201ENST00000296930 NBPF12Q5TAG4 269 aaPredicted RBP20.35■□□□□ 0.85
NPM1-201ENST00000296930 INTS3Q68E01 1043 aaKnown RBP20.35■□□□□ 0.85
NPM1-201ENST00000296930 FZD1Q9UP38 647 aa20.35■□□□□ 0.85
NPM1-201ENST00000296930 MKRN3Q13064 507 aaKnown RBP20.34■□□□□ 0.85
NPM1-201ENST00000296930 SPRYD7Q5W111 196 aa20.34■□□□□ 0.85
NPM1-201ENST00000296930 SLC10A4Q96EP9 437 aa20.34■□□□□ 0.85
NPM1-201ENST00000296930 SIL1Q9H173 461 aa20.34■□□□□ 0.85
NPM1-201ENST00000296930 SUGT1Q9Y2Z0 365 aa20.34■□□□□ 0.85
NPM1-201ENST00000296930 IPO8O15397 1037 aaKnown RBP20.34■□□□□ 0.85
NPM1-201ENST00000296930 GRIK5Q16478 980 aa20.34■□□□□ 0.85
NPM1-201ENST00000296930 TEKT1Q969V4 418 aa20.34■□□□□ 0.85
NPM1-201ENST00000296930 MEIS3Q99687 375 aa20.34■□□□□ 0.85
NPM1-201ENST00000296930 CEP126Q9P2H0 1117 aa20.34■□□□□ 0.85
NPM1-201ENST00000296930 MAST3O60307 1309 aa20.34■□□□□ 0.85
NPM1-201ENST00000296930 CCDC85CA6NKD9 419 aa20.33■□□□□ 0.84
NPM1-201ENST00000296930 GNAI3P08754 354 aa20.33■□□□□ 0.84
NPM1-201ENST00000296930 IREB2P48200 963 aaKnown RBP20.33■□□□□ 0.84
NPM1-201ENST00000296930 MRIQ9BWK5 157 aa20.33■□□□□ 0.84
NPM1-201ENST00000296930 TNNI2P48788 182 aa20.32■□□□□ 0.84
NPM1-201ENST00000296930 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.32■□□□□ 0.84
NPM1-201ENST00000296930 IL15P40933 162 aaPredicted RBP20.31■□□□□ 0.84
NPM1-201ENST00000296930 ATP2B3Q16720 1220 aa20.31■□□□□ 0.84
NPM1-201ENST00000296930 WDR66Q8TBY9 1149 aa20.31■□□□□ 0.84
NPM1-201ENST00000296930 COPRSQ9NQ92 184 aa20.31■□□□□ 0.84
NPM1-201ENST00000296930 LAMB1P07942 1786 aa20.31■□□□□ 0.84
NPM1-201ENST00000296930 TCP10L2B9ZVM9 353 aa20.31■□□□□ 0.84
NPM1-201ENST00000296930 USP2O75604 605 aaPredicted RBP20.31■□□□□ 0.84
NPM1-201ENST00000296930 ZBTB48P10074 688 aaPredicted RBP20.31■□□□□ 0.84
NPM1-201ENST00000296930 CLMNQ96JQ2 1002 aa20.31■□□□□ 0.84
NPM1-201ENST00000296930 ZDHHC15Q96MV8 337 aa20.31■□□□□ 0.84
NPM1-201ENST00000296930 MANSC4A6NHS7 340 aaPredicted RBP20.3■□□□□ 0.84
NPM1-201ENST00000296930 TBC1D8O95759 1140 aa20.3■□□□□ 0.84
NPM1-201ENST00000296930 INHBEP58166 350 aa20.3■□□□□ 0.84
NPM1-201ENST00000296930 ANKRD13AQ8IZ07 590 aa20.3■□□□□ 0.84
NPM1-201ENST00000296930 GNL3LQ9NVN8 582 aaKnown RBP20.3■□□□□ 0.84
NPM1-201ENST00000296930 C20orf194Q5TEA3 1177 aa20.29■□□□□ 0.84
NPM1-201ENST00000296930 FRAT1Q92837 279 aaPredicted RBP20.29■□□□□ 0.84
NPM1-201ENST00000296930 WNK4Q96J92 1243 aa20.29■□□□□ 0.84
NPM1-201ENST00000296930 TEPSINQ96N21 525 aa20.29■□□□□ 0.84
NPM1-201ENST00000296930 PA2G4Q9UQ80 394 aaKnown RBP20.29■□□□□ 0.84
NPM1-201ENST00000296930 ALDH1A1P00352 501 aa20.29■□□□□ 0.84
NPM1-201ENST00000296930 TRIM27P14373 513 aa20.29■□□□□ 0.84
NPM1-201ENST00000296930 NOM1Q5C9Z4 860 aaKnown RBP20.29■□□□□ 0.84
NPM1-201ENST00000296930 HHIPL2Q6UWX4 724 aa20.29■□□□□ 0.84
NPM1-201ENST00000296930 ATF7IPQ6VMQ6 1270 aa20.29■□□□□ 0.84
NPM1-201ENST00000296930 CFHR5Q9BXR6 569 aa20.29■□□□□ 0.84
NPM1-201ENST00000296930 TMOD2Q9NZR1 351 aa20.29■□□□□ 0.84
NPM1-201ENST00000296930 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.29■□□□□ 0.84
NPM1-201ENST00000296930 OTOFQ9HC10 1997 aa20.28■□□□□ 0.84
NPM1-201ENST00000296930 CTU1Q7Z7A3 348 aaKnown RBP20.28■□□□□ 0.84
NPM1-201ENST00000296930 TMEM39BQ9GZU3 492 aa20.28■□□□□ 0.84
NPM1-201ENST00000296930 MTX1Q13505 466 aa20.27■□□□□ 0.84
NPM1-201ENST00000296930 SEMA3EO15041 775 aa20.26■□□□□ 0.83
NPM1-201ENST00000296930 SRGAP3O43295 1099 aa20.26■□□□□ 0.83
NPM1-201ENST00000296930 FKBP1CQ5VVH2 108 aa20.26■□□□□ 0.83
NPM1-201ENST00000296930 APOBEC3HQ6NTF7 200 aaKnown RBP20.26■□□□□ 0.83
NPM1-201ENST00000296930 ZNF296Q8WUU4 475 aaPredicted RBP20.26■□□□□ 0.83
NPM1-201ENST00000296930 FAM83AQ86UY5 434 aa20.26■□□□□ 0.83
NPM1-201ENST00000296930 CDAN1Q8IWY9 1227 aa20.26■□□□□ 0.83
NPM1-201ENST00000296930 DENND2AQ9ULE3 1009 aa20.26■□□□□ 0.83
NPM1-201ENST00000296930 TNNQ9UQP3 1299 aa20.26■□□□□ 0.83
NPM1-201ENST00000296930 GPR25O00155 361 aa20.25■□□□□ 0.83
NPM1-201ENST00000296930 ZBTB22O15209 634 aa20.25■□□□□ 0.83
NPM1-201ENST00000296930 CACNB3P54284 484 aa20.25■□□□□ 0.83
NPM1-201ENST00000296930 ZKSCAN2Q63HK3 967 aa20.25■□□□□ 0.83
NPM1-201ENST00000296930 IFNL1Q8IU54 200 aa20.25■□□□□ 0.83
NPM1-201ENST00000296930 PHKA1P46020 1223 aa20.24■□□□□ 0.83
NPM1-201ENST00000296930 PDE3AQ14432 1141 aa20.24■□□□□ 0.83
NPM1-201ENST00000296930 CLUAP1Q96AJ1 413 aa20.24■□□□□ 0.83
NPM1-201ENST00000296930 HOOK2Q96ED9 719 aa20.24■□□□□ 0.83
NPM1-201ENST00000296930 SALL1Q9NSC2 1324 aa20.24■□□□□ 0.83
NPM1-201ENST00000296930 GNAI2P04899 355 aa20.23■□□□□ 0.83
NPM1-201ENST00000296930 ELP3Q9H9T3 547 aa20.23■□□□□ 0.83
NPM1-201ENST00000296930 LDHBP07195 334 aaKnown RBP20.23■□□□□ 0.83
NPM1-201ENST00000296930 GJA5P36382 358 aa20.23■□□□□ 0.83
NPM1-201ENST00000296930 RGS19P49795 217 aa20.23■□□□□ 0.83
NPM1-201ENST00000296930 MAP3K9P80192 1104 aa20.23■□□□□ 0.83
NPM1-201ENST00000296930 PKN2Q16513 984 aaKnown RBP20.23■□□□□ 0.83
NPM1-201ENST00000296930 CCDC102BQ68D86 513 aa20.23■□□□□ 0.83
NPM1-201ENST00000296930 AKAP2Q9Y2D5 859 aa20.23■□□□□ 0.83
NPM1-201ENST00000296930 PRDX5P30044 214 aa20.22■□□□□ 0.83
NPM1-201ENST00000296930 ERICH6BQ5W0A0 696 aa20.22■□□□□ 0.83
NPM1-201ENST00000296930 OTUD7BQ6GQQ9 843 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms