RNA–Protein interactions for RNA: ENST00000296800.4

PRKAA1-201, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PRKAA1, Length 1,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAA1-201ENST00000296800 CLDN10P78369 228 aa9.57□□□□□ -0.88
PRKAA1-201ENST00000296800 U2AF1Q01081 240 aaKnown RBP eCLIP9.57□□□□□ -0.88
PRKAA1-201ENST00000296800 ADAMTS19Q8TE59 1207 aa9.57□□□□□ -0.88
PRKAA1-201ENST00000296800 TSPAN10Q9H1Z9 355 aaPredicted RBP9.57□□□□□ -0.88
PRKAA1-201ENST00000296800 MYH16Q9H6N6 1097 aa9.57□□□□□ -0.88
PRKAA1-201ENST00000296800 NOP58Q9Y2X3 529 aaKnown RBP9.57□□□□□ -0.88
PRKAA1-201ENST00000296800 HCN4Q9Y3Q4 1203 aa9.57□□□□□ -0.88
PRKAA1-201ENST00000296800 PLEKHG1Q9ULL1 1385 aa9.57□□□□□ -0.88
PRKAA1-201ENST00000296800 METP08581 1390 aa9.56□□□□□ -0.88
PRKAA1-201ENST00000296800 USP17L3A6NCW0 530 aa9.56□□□□□ -0.88
PRKAA1-201ENST00000296800 USP17L4A6NCW7 530 aa9.56□□□□□ -0.88
PRKAA1-201ENST00000296800 M0R082 166 aa9.56□□□□□ -0.88
PRKAA1-201ENST00000296800 CT47B1P0C2W7 299 aaPredicted RBP9.56□□□□□ -0.88
PRKAA1-201ENST00000296800 HIRAP54198 1017 aaPredicted RBP9.56□□□□□ -0.88
PRKAA1-201ENST00000296800 SPEM2Q0P670 501 aa9.56□□□□□ -0.88
PRKAA1-201ENST00000296800 AAMPQ13685 434 aa9.56□□□□□ -0.88
PRKAA1-201ENST00000296800 COL9A3Q14050 684 aaPredicted RBP9.56□□□□□ -0.88
PRKAA1-201ENST00000296800 USP17L2Q6R6M4 530 aa9.56□□□□□ -0.88
PRKAA1-201ENST00000296800 USP17L1Q7RTZ2 530 aa9.56□□□□□ -0.88
PRKAA1-201ENST00000296800 ZNF417Q8TAU3 575 aa9.56□□□□□ -0.88
PRKAA1-201ENST00000296800 ZNF587Q96SQ5 575 aaPredicted RBP9.56□□□□□ -0.88
PRKAA1-201ENST00000296800 KRTAP9-9Q9BYP9 154 aa9.56□□□□□ -0.88
PRKAA1-201ENST00000296800 KRTAP9-4Q9BYQ2 154 aa9.56□□□□□ -0.88
PRKAA1-201ENST00000296800 PNNQ9H307 717 aaKnown RBP9.56□□□□□ -0.88
PRKAA1-201ENST00000296800 GGNBP2Q9H3C7 697 aa9.56□□□□□ -0.88
PRKAA1-201ENST00000296800 PRDM6Q9NQX0 595 aa9.56□□□□□ -0.88
PRKAA1-201ENST00000296800 ANKIB1Q9P2G1 1089 aa9.56□□□□□ -0.88
PRKAA1-201ENST00000296800 CHMP3Q9Y3E7 222 aa9.56□□□□□ -0.88
PRKAA1-201ENST00000296800 STARD13Q9Y3M8 1113 aa9.56□□□□□ -0.88
PRKAA1-201ENST00000296800 MAP2P11137 1827 aaKnown RBP9.56□□□□□ -0.88
PRKAA1-201ENST00000296800 ADAMTS13Q76LX8 1427 aa9.56□□□□□ -0.88
PRKAA1-201ENST00000296800 ARHGAP23Q9P227 1491 aa9.55□□□□□ -0.88
PRKAA1-201ENST00000296800 AATKQ6ZMQ8 1374 aa9.55□□□□□ -0.88
PRKAA1-201ENST00000296800 FYB1O15117 783 aa9.55□□□□□ -0.88
PRKAA1-201ENST00000296800 HDGFL1Q5TGJ6 251 aa9.55□□□□□ -0.88
PRKAA1-201ENST00000296800 POTEAQ6S8J7 498 aa9.55□□□□□ -0.88
PRKAA1-201ENST00000296800 LARGE2Q8N3Y3 721 aa9.55□□□□□ -0.88
PRKAA1-201ENST00000296800 CEP63Q96MT8 703 aa9.55□□□□□ -0.88
PRKAA1-201ENST00000296800 BRD7Q9NPI1 651 aa9.55□□□□□ -0.88
PRKAA1-201ENST00000296800 RRP7AQ9Y3A4 280 aaKnown RBP9.55□□□□□ -0.88
PRKAA1-201ENST00000296800 XRN1Q8IZH2 1706 aaKnown RBP9.55□□□□□ -0.88
PRKAA1-201ENST00000296800 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.55□□□□□ -0.88
PRKAA1-201ENST00000296800 PTCH1Q13635 1447 aa9.55□□□□□ -0.88
PRKAA1-201ENST00000296800 STRCQ7RTU9 1775 aa9.55□□□□□ -0.88
PRKAA1-201ENST00000296800 IL16Q14005 1332 aa9.55□□□□□ -0.88
PRKAA1-201ENST00000296800 FMN2Q9NZ56 1722 aa9.54□□□□□ -0.88
PRKAA1-201ENST00000296800 M0R2N6 131 aa9.54□□□□□ -0.88
PRKAA1-201ENST00000296800 KCNQ4P56696 695 aa9.54□□□□□ -0.88
PRKAA1-201ENST00000296800 GRIK4Q16099 956 aa9.54□□□□□ -0.88
PRKAA1-201ENST00000296800 MICALL1Q8N3F8 863 aa9.54□□□□□ -0.88
PRKAA1-201ENST00000296800 OGFOD1Q8N543 542 aa9.54□□□□□ -0.88
PRKAA1-201ENST00000296800 HSH2DQ96JZ2 352 aa9.54□□□□□ -0.88
PRKAA1-201ENST00000296800 UCN2Q96RP3 112 aa9.54□□□□□ -0.88
PRKAA1-201ENST00000296800 BACH2Q9BYV9 841 aa9.54□□□□□ -0.88
PRKAA1-201ENST00000296800 PHACTR1Q9C0D0 580 aa9.54□□□□□ -0.88
PRKAA1-201ENST00000296800 PALM3A6NDB9 673 aaPredicted RBP9.53□□□□□ -0.88
PRKAA1-201ENST00000296800 SFI1A8K8P3 1242 aa9.53□□□□□ -0.88
PRKAA1-201ENST00000296800 U2SURPO15042 1029 aaKnown RBP9.53□□□□□ -0.88
PRKAA1-201ENST00000296800 ATP9BO43861 1147 aa9.53□□□□□ -0.88
PRKAA1-201ENST00000296800 DIAPH1O60610 1272 aaKnown RBP9.53□□□□□ -0.88
PRKAA1-201ENST00000296800 BCAR3O75815 825 aa9.53□□□□□ -0.88
PRKAA1-201ENST00000296800 ALBP02768 609 aa9.53□□□□□ -0.88
PRKAA1-201ENST00000296800 ADH7P40394 386 aa9.53□□□□□ -0.88
PRKAA1-201ENST00000296800 C8orf86Q6ZUL3 223 aa9.53□□□□□ -0.88
PRKAA1-201ENST00000296800 RAB44Q7Z6P3 723 aaPredicted RBP9.53□□□□□ -0.88
PRKAA1-201ENST00000296800 IPO9Q96P70 1041 aaKnown RBP9.53□□□□□ -0.88
PRKAA1-201ENST00000296800 RGS17Q9UGC6 210 aaPredicted RBP9.53□□□□□ -0.88
PRKAA1-201ENST00000296800 MKRN1Q9UHC7 482 aaKnown RBP9.53□□□□□ -0.88
PRKAA1-201ENST00000296800 KCNH4Q9UQ05 1017 aa9.53□□□□□ -0.88
PRKAA1-201ENST00000296800 USP54Q70EL1 1684 aa9.52□□□□□ -0.89
PRKAA1-201ENST00000296800 RARSP54136 660 aaKnown RBP9.52□□□□□ -0.89
PRKAA1-201ENST00000296800 FLIIQ13045 1269 aa9.52□□□□□ -0.89
PRKAA1-201ENST00000296800 TRIM28Q13263 835 aaKnown RBP9.52□□□□□ -0.89
PRKAA1-201ENST00000296800 KRTAP19-1Q8IUB9 90 aa9.52□□□□□ -0.89
PRKAA1-201ENST00000296800 ZNF280CQ8ND82 737 aa9.52□□□□□ -0.89
PRKAA1-201ENST00000296800 SUSD3Q96L08 255 aa9.52□□□□□ -0.89
PRKAA1-201ENST00000296800 PLEKHF1Q96S99 279 aa9.52□□□□□ -0.89
PRKAA1-201ENST00000296800 ZNF142P52746 1687 aaPredicted RBP9.51□□□□□ -0.89
PRKAA1-201ENST00000296800 TMPOP42166 694 aaKnown RBP9.51□□□□□ -0.89
PRKAA1-201ENST00000296800 WAPLQ7Z5K2 1190 aa9.51□□□□□ -0.89
PRKAA1-201ENST00000296800 CLUAP1Q96AJ1 413 aa9.51□□□□□ -0.89
PRKAA1-201ENST00000296800 NACC1Q96RE7 527 aa9.51□□□□□ -0.89
PRKAA1-201ENST00000296800 RGPD1P0DJD0 1748 aa9.51□□□□□ -0.89
PRKAA1-201ENST00000296800 ROBO2Q9HCK4 1378 aa9.5□□□□□ -0.89
PRKAA1-201ENST00000296800 DLG5Q8TDM6 1919 aa9.5□□□□□ -0.89
PRKAA1-201ENST00000296800 OVOS2A0A0J9YW53 1432 aa9.5□□□□□ -0.89
PRKAA1-201ENST00000296800 OVOS2Q6IE36 1432 aa9.5□□□□□ -0.89
PRKAA1-201ENST00000296800 PPP1R12BO60237 982 aaPredicted RBP9.5□□□□□ -0.89
PRKAA1-201ENST00000296800 NEFMP07197 916 aa9.5□□□□□ -0.89
PRKAA1-201ENST00000296800 NID1P14543 1247 aa9.5□□□□□ -0.89
PRKAA1-201ENST00000296800 TYRO3Q06418 890 aa9.5□□□□□ -0.89
PRKAA1-201ENST00000296800 C20orf204Q6ZNR8 217 aa9.5□□□□□ -0.89
PRKAA1-201ENST00000296800 SIX5Q8N196 739 aa9.5□□□□□ -0.89
PRKAA1-201ENST00000296800 TSEN2Q8NCE0 465 aaKnown RBP9.5□□□□□ -0.89
PRKAA1-201ENST00000296800 CEP170BQ9Y4F5 1589 aaPredicted RBP9.5□□□□□ -0.89
PRKAA1-201ENST00000296800 C21orf2O43822 256 aa9.49□□□□□ -0.89
PRKAA1-201ENST00000296800 DKK1O94907 266 aa9.49□□□□□ -0.89
PRKAA1-201ENST00000296800 LRP8Q14114 963 aa9.49□□□□□ -0.89
PRKAA1-201ENST00000296800 PMFBP1Q8TBY8 1022 aa9.49□□□□□ -0.89
PRKAA1-201ENST00000296800 USP6P35125 1406 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms