RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 RALYLQ86SE5 291 aaKnown RBP13.82□□□□□ -0.2
RHO-201ENST00000296271 LINC00116Q8NCU8 138 aa13.82□□□□□ -0.2
RHO-201ENST00000296271 NCOA7Q8NI08 942 aa13.82□□□□□ -0.2
RHO-201ENST00000296271 STRBPQ96SI9 672 aaKnown RBP13.82□□□□□ -0.2
RHO-201ENST00000296271 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.82□□□□□ -0.2
RHO-201ENST00000296271 SPATA31A5Q5VU36 1347 aa13.82□□□□□ -0.2
RHO-201ENST00000296271 SPATA31A7Q8IWB4 1347 aa13.82□□□□□ -0.2
RHO-201ENST00000296271 KIF28PB7ZC32 967 aa13.82□□□□□ -0.2
RHO-201ENST00000296271 ERFEQ4G0M1 354 aa13.82□□□□□ -0.2
RHO-201ENST00000296271 PHKBQ93100 1093 aa13.82□□□□□ -0.2
RHO-201ENST00000296271 ZKSCAN3Q9BRR0 538 aa13.82□□□□□ -0.2
RHO-201ENST00000296271 LETM1O95202 739 aaPredicted RBP13.81□□□□□ -0.2
RHO-201ENST00000296271 CDC27P30260 824 aa13.81□□□□□ -0.2
RHO-201ENST00000296271 ADGRA1Q86SQ6 560 aa13.81□□□□□ -0.2
RHO-201ENST00000296271 GYG1P46976 350 aa13.81□□□□□ -0.2
RHO-201ENST00000296271 CHRNDQ07001 517 aa13.81□□□□□ -0.2
RHO-201ENST00000296271 AMIGO3Q86WK7 504 aa13.81□□□□□ -0.2
RHO-201ENST00000296271 LCORLQ8N3X6 602 aa13.81□□□□□ -0.2
RHO-201ENST00000296271 AIDAQ96BJ3 306 aa13.81□□□□□ -0.2
RHO-201ENST00000296271 DNAJC25Q9H1X3 360 aa13.81□□□□□ -0.2
RHO-201ENST00000296271 ORC3Q9UBD5 711 aaPredicted RBP13.81□□□□□ -0.2
RHO-201ENST00000296271 CCDC39Q9UFE4 941 aa13.81□□□□□ -0.2
RHO-201ENST00000296271 CLIC4Q9Y696 253 aa13.81□□□□□ -0.2
RHO-201ENST00000296271 WNK3Q9BYP7 1800 aa13.81□□□□□ -0.2
RHO-201ENST00000296271 CCDC192P0DO97 292 aa13.8□□□□□ -0.2
RHO-201ENST00000296271 NAA16Q6N069 864 aaPredicted RBP13.8□□□□□ -0.2
RHO-201ENST00000296271 MICU3Q86XE3 530 aa13.8□□□□□ -0.2
RHO-201ENST00000296271 CCAR1Q8IX12 1150 aaKnown RBP13.8□□□□□ -0.2
RHO-201ENST00000296271 CLSTN2Q9H4D0 955 aa13.8□□□□□ -0.2
RHO-201ENST00000296271 ZSCAN16Q9H4T2 348 aaPredicted RBP13.8□□□□□ -0.2
RHO-201ENST00000296271 EVCP57679 992 aa13.8□□□□□ -0.2
RHO-201ENST00000296271 HMGN5P82970 282 aaKnown RBP13.8□□□□□ -0.2
RHO-201ENST00000296271 UBE3CQ15386 1083 aa13.8□□□□□ -0.2
RHO-201ENST00000296271 LRRFIP1Q32MZ4 808 aaKnown RBP13.8□□□□□ -0.2
RHO-201ENST00000296271 CBX8Q9HC52 389 aa13.8□□□□□ -0.2
RHO-201ENST00000296271 AHDC1Q5TGY3 1603 aaPredicted RBP13.8□□□□□ -0.2
RHO-201ENST00000296271 MROH5Q6ZUA9 1318 aa13.8□□□□□ -0.2
RHO-201ENST00000296271 SLC5A1P13866 664 aa13.79□□□□□ -0.2
RHO-201ENST00000296271 HS1BP3Q53T59 392 aa13.79□□□□□ -0.2
RHO-201ENST00000296271 RRP12Q5JTH9 1297 aaKnown RBP13.79□□□□□ -0.2
RHO-201ENST00000296271 IFNL3Q8IZI9 196 aa13.79□□□□□ -0.2
RHO-201ENST00000296271 CMTR1Q8N1G2 835 aaKnown RBP13.79□□□□□ -0.2
RHO-201ENST00000296271 SRP68Q9UHB9 627 aaKnown RBP13.79□□□□□ -0.2
RHO-201ENST00000296271 RCOR1Q9UKL0 485 aa13.79□□□□□ -0.2
RHO-201ENST00000296271 COL22A1Q8NFW1 1626 aaPredicted RBP13.79□□□□□ -0.2
RHO-201ENST00000296271 DDX60Q8IY21 1712 aaKnown RBP13.79□□□□□ -0.2
RHO-201ENST00000296271 KLRK1P26718 216 aa13.79□□□□□ -0.2
RHO-201ENST00000296271 ME1P48163 572 aa13.79□□□□□ -0.2
RHO-201ENST00000296271 EVX2Q03828 476 aa13.79□□□□□ -0.2
RHO-201ENST00000296271 UVSSAQ2YD98 709 aa13.79□□□□□ -0.2
RHO-201ENST00000296271 ZNF512BQ96KM6 892 aaPredicted RBP13.79□□□□□ -0.2
RHO-201ENST00000296271 C8orf37Q96NL8 207 aa13.79□□□□□ -0.2
RHO-201ENST00000296271 R3HCC1Q9Y3T6 440 aaKnown RBP13.79□□□□□ -0.2
RHO-201ENST00000296271 A0A1B0GVL5 298 aa13.78□□□□□ -0.2
RHO-201ENST00000296271 GSG1L2A8MUP6 293 aa13.78□□□□□ -0.2
RHO-201ENST00000296271 CPLX1O14810 134 aa13.78□□□□□ -0.2
RHO-201ENST00000296271 SNW1Q13573 536 aaKnown RBP13.78□□□□□ -0.2
RHO-201ENST00000296271 TTF1Q15361 905 aaPredicted RBP13.78□□□□□ -0.2
RHO-201ENST00000296271 CCDC82Q8N4S0 544 aa13.78□□□□□ -0.2
RHO-201ENST00000296271 SDR42E1Q8WUS8 393 aa13.78□□□□□ -0.2
RHO-201ENST00000296271 C8orf76Q96K31 380 aa13.78□□□□□ -0.2
RHO-201ENST00000296271 ZSWIM5Q9P217 1185 aa13.78□□□□□ -0.2
RHO-201ENST00000296271 ABCF2Q9UG63 623 aa13.78□□□□□ -0.2
RHO-201ENST00000296271 NRAPQ86VF7 1730 aa13.78□□□□□ -0.2
RHO-201ENST00000296271 CCDC152Q4G0S7 254 aa13.78□□□□□ -0.2
RHO-201ENST00000296271 C11orf57Q6ZUT1 292 aaPredicted RBP13.78□□□□□ -0.2
RHO-201ENST00000296271 CFAP45Q9UL16 551 aa13.78□□□□□ -0.2
RHO-201ENST00000296271 PCDHA7Q9UN72 937 aa13.78□□□□□ -0.2
RHO-201ENST00000296271 JAG2Q9Y219 1238 aa13.78□□□□□ -0.2
RHO-201ENST00000296271 PHLPP1O60346 1717 aa13.78□□□□□ -0.2
RHO-201ENST00000296271 SH2B2O14492 632 aaPredicted RBP13.78□□□□□ -0.2
RHO-201ENST00000296271 ZNF500O60304 480 aaPredicted RBP13.78□□□□□ -0.2
RHO-201ENST00000296271 OFD1O75665 1012 aa13.78□□□□□ -0.2
RHO-201ENST00000296271 UQCRFS1P1P0C7P4 283 aa13.78□□□□□ -0.2
RHO-201ENST00000296271 TRDNQ13061 729 aa13.78□□□□□ -0.2
RHO-201ENST00000296271 ZSCAN25Q6NSZ9 544 aa13.78□□□□□ -0.2
RHO-201ENST00000296271 TOMM22Q9NS69 142 aa13.78□□□□□ -0.2
RHO-201ENST00000296271 ABCC12Q96J65 1359 aa13.77□□□□□ -0.2
RHO-201ENST00000296271 MYH15Q9Y2K3 1946 aa13.77□□□□□ -0.2
RHO-201ENST00000296271 IGHMBP2P38935 993 aaKnown RBP13.77□□□□□ -0.21
RHO-201ENST00000296271 TBC1D9BQ66K14 1250 aa13.77□□□□□ -0.21
RHO-201ENST00000296271 FBXO18Q8NFZ0 1043 aa13.77□□□□□ -0.21
RHO-201ENST00000296271 FAM200AQ8TCP9 573 aa13.77□□□□□ -0.21
RHO-201ENST00000296271 IGDCC4Q8TDY8 1250 aa13.77□□□□□ -0.21
RHO-201ENST00000296271 CELF1Q92879 486 aaKnown RBP13.77□□□□□ -0.21
RHO-201ENST00000296271 ANGEL1Q9UNK9 670 aaKnown RBP13.77□□□□□ -0.21
RHO-201ENST00000296271 LRP5O75197 1615 aa13.77□□□□□ -0.21
RHO-201ENST00000296271 CYP2D7A0A087X1C5 515 aa13.77□□□□□ -0.21
RHO-201ENST00000296271 RANBP6O60518 1105 aaKnown RBP13.77□□□□□ -0.21
RHO-201ENST00000296271 APOA5Q6Q788 366 aa13.77□□□□□ -0.21
RHO-201ENST00000296271 FBXL16Q8N461 479 aa13.77□□□□□ -0.21
RHO-201ENST00000296271 FSIP1Q8NA03 581 aa13.77□□□□□ -0.21
RHO-201ENST00000296271 NAPBQ9H115 298 aa13.77□□□□□ -0.21
RHO-201ENST00000296271 KCNF1Q9H3M0 494 aa13.77□□□□□ -0.21
RHO-201ENST00000296271 FAM217BQ9NTX9 383 aaPredicted RBP13.77□□□□□ -0.21
RHO-201ENST00000296271 DDX19AQ9NUU7 478 aaKnown RBP13.77□□□□□ -0.21
RHO-201ENST00000296271 NRBP1Q9UHY1 535 aa13.77□□□□□ -0.21
RHO-201ENST00000296271 PDIA4P13667 645 aaKnown RBP13.76□□□□□ -0.21
RHO-201ENST00000296271 RBM43Q6ZSC3 357 aaKnown RBP13.76□□□□□ -0.21
RHO-201ENST00000296271 TICAM2Q86XR7 235 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms