RNA–Protein interactions for RNA: ENST00000296142.3

RTP3-201, Transcript of receptor transporter protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTP3, Length 1,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3-201ENST00000296142 DOCK3Q8IZD9 2030 aa10.63□□□□□ -0.71
RTP3-201ENST00000296142 ARAP2Q8WZ64 1704 aa10.63□□□□□ -0.71
RTP3-201ENST00000296142 PUS3Q9BZE2 481 aaKnown RBP10.63□□□□□ -0.71
RTP3-201ENST00000296142 ARHGAP39Q9C0H5 1083 aa10.63□□□□□ -0.71
RTP3-201ENST00000296142 ZNF70Q9UC06 446 aaPredicted RBP10.63□□□□□ -0.71
RTP3-201ENST00000296142 TTF2Q9UNY4 1162 aaKnown RBP10.63□□□□□ -0.71
RTP3-201ENST00000296142 PTCH2Q9Y6C5 1203 aa10.63□□□□□ -0.71
RTP3-201ENST00000296142 MYH13Q9UKX3 1938 aa10.63□□□□□ -0.71
RTP3-201ENST00000296142 IL1R1P14778 569 aa10.62□□□□□ -0.71
RTP3-201ENST00000296142 TAF1CQ15572 869 aaPredicted RBP10.62□□□□□ -0.71
RTP3-201ENST00000296142 TAF7LQ5H9L4 462 aa10.62□□□□□ -0.71
RTP3-201ENST00000296142 WWC1Q8IX03 1113 aa10.62□□□□□ -0.71
RTP3-201ENST00000296142 ANKRD13AQ8IZ07 590 aa10.62□□□□□ -0.71
RTP3-201ENST00000296142 FAM43AQ8N2R8 423 aa10.62□□□□□ -0.71
RTP3-201ENST00000296142 LINS1Q8NG48 757 aa10.62□□□□□ -0.71
RTP3-201ENST00000296142 SH3TC2Q8TF17 1288 aa10.62□□□□□ -0.71
RTP3-201ENST00000296142 BRI3BPQ8WY22 251 aa10.62□□□□□ -0.71
RTP3-201ENST00000296142 OTUD5Q96G74 571 aa10.62□□□□□ -0.71
RTP3-201ENST00000296142 MS4A4AQ96JQ5 239 aa10.62□□□□□ -0.71
RTP3-201ENST00000296142 MYH16Q9H6N6 1097 aa10.62□□□□□ -0.71
RTP3-201ENST00000296142 CNNM1Q9NRU3 951 aa10.62□□□□□ -0.71
RTP3-201ENST00000296142 ZNF521Q96K83 1311 aa10.62□□□□□ -0.71
RTP3-201ENST00000296142 CCL15-CCL14A0A0B4J2E2 113 aa10.61□□□□□ -0.71
RTP3-201ENST00000296142 FXR1P51114 621 aaKnown RBP eCLIP10.61□□□□□ -0.71
RTP3-201ENST00000296142 CHAF1AQ13111 956 aaPredicted RBP10.61□□□□□ -0.71
RTP3-201ENST00000296142 CCL15Q16663 113 aa10.61□□□□□ -0.71
RTP3-201ENST00000296142 SLC4A8Q2Y0W8 1093 aa10.61□□□□□ -0.71
RTP3-201ENST00000296142 MFSD14BQ5SR56 506 aa10.61□□□□□ -0.71
RTP3-201ENST00000296142 INTS3Q68E01 1043 aaKnown RBP10.61□□□□□ -0.71
RTP3-201ENST00000296142 OTUD7BQ6GQQ9 843 aa10.61□□□□□ -0.71
RTP3-201ENST00000296142 B4GALNT3Q6L9W6 998 aa10.61□□□□□ -0.71
RTP3-201ENST00000296142 LDHAL6AQ6ZMR3 332 aa10.61□□□□□ -0.71
RTP3-201ENST00000296142 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.61□□□□□ -0.71
RTP3-201ENST00000296142 MTMR14Q8NCE2 650 aa10.61□□□□□ -0.71
RTP3-201ENST00000296142 GCC1Q96CN9 775 aa10.61□□□□□ -0.71
RTP3-201ENST00000296142 CDCA7LQ96GN5 454 aa10.61□□□□□ -0.71
RTP3-201ENST00000296142 TEPSINQ96N21 525 aa10.61□□□□□ -0.71
RTP3-201ENST00000296142 TMEM106CQ9BVX2 250 aa10.61□□□□□ -0.71
RTP3-201ENST00000296142 COLQQ9Y215 455 aaPredicted RBP10.61□□□□□ -0.71
RTP3-201ENST00000296142 COL1A1P02452 1464 aaPredicted RBP10.61□□□□□ -0.71
RTP3-201ENST00000296142 EXOSC9Q06265 439 aaKnown RBP10.6□□□□□ -0.71
RTP3-201ENST00000296142 VGLL4Q14135 290 aa10.6□□□□□ -0.71
RTP3-201ENST00000296142 SLC9C1Q4G0N8 1177 aa10.6□□□□□ -0.71
RTP3-201ENST00000296142 DZIP1LQ8IYY4 767 aaKnown RBP10.6□□□□□ -0.71
RTP3-201ENST00000296142 ARMC5Q96C12 935 aa10.6□□□□□ -0.71
RTP3-201ENST00000296142 MGAMO43451 1857 aa10.6□□□□□ -0.71
RTP3-201ENST00000296142 H0YGN5 161 aa10.59□□□□□ -0.71
RTP3-201ENST00000296142 VAMP4O75379 141 aa10.59□□□□□ -0.71
RTP3-201ENST00000296142 CT47B1P0C2W7 299 aaPredicted RBP10.59□□□□□ -0.71
RTP3-201ENST00000296142 MS4A1P11836 297 aa10.59□□□□□ -0.71
RTP3-201ENST00000296142 CRKP46108 304 aa10.59□□□□□ -0.71
RTP3-201ENST00000296142 AAMPQ13685 434 aa10.59□□□□□ -0.71
RTP3-201ENST00000296142 CCDC57Q2TAC2 916 aa10.59□□□□□ -0.71
RTP3-201ENST00000296142 SPDYE2Q495Y8 402 aa10.59□□□□□ -0.71
RTP3-201ENST00000296142 BEND3Q5T5X7 828 aa10.59□□□□□ -0.71
RTP3-201ENST00000296142 SLC4A10Q6U841 1118 aa10.59□□□□□ -0.71
RTP3-201ENST00000296142 C15orf52Q6ZUT6 534 aaKnown RBP10.59□□□□□ -0.71
RTP3-201ENST00000296142 ZKSCAN4Q969J2 545 aaPredicted RBP10.59□□□□□ -0.71
RTP3-201ENST00000296142 ZNF333Q96JL9 665 aa10.59□□□□□ -0.71
RTP3-201ENST00000296142 PPP2R3BQ9Y5P8 575 aa10.59□□□□□ -0.71
RTP3-201ENST00000296142 FANCIQ9NVI1 1328 aa10.59□□□□□ -0.71
RTP3-201ENST00000296142 TESPA1A2RU30 521 aaPredicted RBP10.58□□□□□ -0.71
RTP3-201ENST00000296142 HIBADHP31937 336 aaKnown RBP10.58□□□□□ -0.71
RTP3-201ENST00000296142 MMP14P50281 582 aa10.58□□□□□ -0.71
RTP3-201ENST00000296142 MAP3K9P80192 1104 aa10.58□□□□□ -0.71
RTP3-201ENST00000296142 MIGA2Q7L4E1 593 aa10.58□□□□□ -0.71
RTP3-201ENST00000296142 TRMT2AQ8IZ69 625 aaKnown RBP10.58□□□□□ -0.71
RTP3-201ENST00000296142 TDRD7Q8NHU6 1098 aaKnown RBP10.58□□□□□ -0.71
RTP3-201ENST00000296142 FAM84BQ96KN1 310 aaPredicted RBP10.58□□□□□ -0.71
RTP3-201ENST00000296142 CHMP4AQ9BY43 222 aa10.58□□□□□ -0.71
RTP3-201ENST00000296142 ZFYVE28Q9HCC9 887 aa10.58□□□□□ -0.71
RTP3-201ENST00000296142 SPINK5Q9NQ38 1064 aaPredicted RBP10.58□□□□□ -0.71
RTP3-201ENST00000296142 SZT2Q5T011 3432 aa10.58□□□□□ -0.72
RTP3-201ENST00000296142 MTFR1Q15390 333 aa10.58□□□□□ -0.72
RTP3-201ENST00000296142 LRRC24Q50LG9 513 aa10.58□□□□□ -0.72
RTP3-201ENST00000296142 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.58□□□□□ -0.72
RTP3-201ENST00000296142 KLHDC4Q8TBB5 520 aa10.58□□□□□ -0.72
RTP3-201ENST00000296142 SUCLG2Q96I99 432 aa10.58□□□□□ -0.72
RTP3-201ENST00000296142 C9orf78Q9NZ63 289 aaPredicted RBP10.58□□□□□ -0.72
RTP3-201ENST00000296142 CSADQ9Y600 493 aa10.58□□□□□ -0.72
RTP3-201ENST00000296142 FAM205AQ6ZU69 1335 aa10.57□□□□□ -0.72
RTP3-201ENST00000296142 BTBD19C9JJ37 291 aa10.57□□□□□ -0.72
RTP3-201ENST00000296142 GRM8O00222 908 aa10.57□□□□□ -0.72
RTP3-201ENST00000296142 IRF6O14896 467 aa10.57□□□□□ -0.72
RTP3-201ENST00000296142 FRAT2O75474 233 aaPredicted RBP10.57□□□□□ -0.72
RTP3-201ENST00000296142 CTGFP29279 349 aa10.57□□□□□ -0.72
RTP3-201ENST00000296142 GTF2A2P52657 109 aa10.57□□□□□ -0.72
RTP3-201ENST00000296142 FKBP1AP62942 108 aaKnown RBP10.57□□□□□ -0.72
RTP3-201ENST00000296142 TNFAIP1Q13829 316 aa10.57□□□□□ -0.72
RTP3-201ENST00000296142 WRNIP1Q96S55 665 aa10.57□□□□□ -0.72
RTP3-201ENST00000296142 CPA4Q9UI42 421 aa10.57□□□□□ -0.72
RTP3-201ENST00000296142 RANBP2P49792 3224 aaKnown RBP10.56□□□□□ -0.72
RTP3-201ENST00000296142 INPP5BP32019 993 aa10.56□□□□□ -0.72
RTP3-201ENST00000296142 BCAMP50895 628 aa10.56□□□□□ -0.72
RTP3-201ENST00000296142 CHRDL2Q6WN34 429 aa10.56□□□□□ -0.72
RTP3-201ENST00000296142 NBPF11Q86T75 865 aa10.56□□□□□ -0.72
RTP3-201ENST00000296142 VPS37DQ86XT2 251 aa10.56□□□□□ -0.72
RTP3-201ENST00000296142 KAZALD1Q96I82 304 aa10.56□□□□□ -0.72
RTP3-201ENST00000296142 SERPINA10Q9UK55 444 aa10.56□□□□□ -0.72
RTP3-201ENST00000296142 SNCAIPQ9Y6H5 919 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms