RNA–Protein interactions for RNA: ENST00000295006.5

CAPN2-201, Transcript of calpain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN2, Length 3,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-201ENST00000295006 KRT40Q6A162 431 aa17.81■□□□□ 0.44
CAPN2-201ENST00000295006 BICDL1Q6ZP65 573 aa17.81■□□□□ 0.44
CAPN2-201ENST00000295006 SMAP1Q8IYB5 467 aaPredicted RBP17.81■□□□□ 0.44
CAPN2-201ENST00000295006 TRMT44Q8IYL2 757 aaKnown RBP17.81■□□□□ 0.44
CAPN2-201ENST00000295006 MAGEB6Q8N7X4 407 aa17.81■□□□□ 0.44
CAPN2-201ENST00000295006 FBXO18Q8NFZ0 1043 aa17.81■□□□□ 0.44
CAPN2-201ENST00000295006 TULP1O00294 542 aaPredicted RBP17.8■□□□□ 0.44
CAPN2-201ENST00000295006 MAPK8IP2Q13387 824 aaPredicted RBP17.8■□□□□ 0.44
CAPN2-201ENST00000295006 SART3Q15020 963 aaKnown RBP17.8■□□□□ 0.44
CAPN2-201ENST00000295006 ERCC6LQ2NKX8 1250 aa17.8■□□□□ 0.44
CAPN2-201ENST00000295006 RAI14Q9P0K7 980 aa17.8■□□□□ 0.44
CAPN2-201ENST00000295006 ASAP1Q9ULH1 1129 aa17.8■□□□□ 0.44
CAPN2-201ENST00000295006 FANCCQ00597 558 aa17.8■□□□□ 0.44
CAPN2-201ENST00000295006 SSRP1Q08945 709 aaKnown RBP17.8■□□□□ 0.44
CAPN2-201ENST00000295006 CCDC102BQ68D86 513 aa17.8■□□□□ 0.44
CAPN2-201ENST00000295006 ZNF274Q96GC6 653 aaPredicted RBP17.8■□□□□ 0.44
CAPN2-201ENST00000295006 TEX35Q5T0J7 233 aa17.8■□□□□ 0.44
CAPN2-201ENST00000295006 LINC00301Q8NCQ3 95 aa17.8■□□□□ 0.44
CAPN2-201ENST00000295006 UBAC1Q9BSL1 405 aa17.8■□□□□ 0.44
CAPN2-201ENST00000295006 ARMT1Q9H993 441 aa17.8■□□□□ 0.44
CAPN2-201ENST00000295006 IQCB1Q15051 598 aa17.79■□□□□ 0.44
CAPN2-201ENST00000295006 USPL1Q5W0Q7 1092 aa17.79■□□□□ 0.44
CAPN2-201ENST00000295006 GREM2Q9H772 168 aa17.79■□□□□ 0.44
CAPN2-201ENST00000295006 HOOK1Q9UJC3 728 aaKnown RBP17.79■□□□□ 0.44
CAPN2-201ENST00000295006 IRS4O14654 1257 aaPredicted RBP17.79■□□□□ 0.44
CAPN2-201ENST00000295006 SLU7O95391 586 aaKnown RBP17.79■□□□□ 0.44
CAPN2-201ENST00000295006 ZNF532Q9HCE3 1301 aa17.79■□□□□ 0.44
CAPN2-201ENST00000295006 NPHP4O75161 1426 aaPredicted RBP17.79■□□□□ 0.44
CAPN2-201ENST00000295006 ZFYP08048 801 aaPredicted RBP17.79■□□□□ 0.44
CAPN2-201ENST00000295006 ANGEL1Q9UNK9 670 aaKnown RBP17.79■□□□□ 0.44
CAPN2-201ENST00000295006 UBE2Q2LH0YL09 131 aa17.78■□□□□ 0.44
CAPN2-201ENST00000295006 H7C1W4 665 aa17.78■□□□□ 0.44
CAPN2-201ENST00000295006 RANBP6O60518 1105 aaKnown RBP17.78■□□□□ 0.44
CAPN2-201ENST00000295006 MBD4O95243 580 aa17.78■□□□□ 0.44
CAPN2-201ENST00000295006 GNG11P61952 73 aa17.78■□□□□ 0.44
CAPN2-201ENST00000295006 KARSQ15046 597 aaKnown RBP17.78■□□□□ 0.44
CAPN2-201ENST00000295006 STAMQ92783 540 aa17.78■□□□□ 0.44
CAPN2-201ENST00000295006 SMARCC2Q8TAQ2 1214 aa17.78■□□□□ 0.44
CAPN2-201ENST00000295006 AKAP12Q02952 1782 aa17.78■□□□□ 0.44
CAPN2-201ENST00000295006 FDPSP14324 419 aaKnown RBP17.78■□□□□ 0.44
CAPN2-201ENST00000295006 ARHGAP29Q52LW3 1261 aa17.78■□□□□ 0.44
CAPN2-201ENST00000295006 KIF28PB7ZC32 967 aa17.77■□□□□ 0.44
CAPN2-201ENST00000295006 COBLO75128 1261 aa17.77■□□□□ 0.44
CAPN2-201ENST00000295006 PHKA1P46020 1223 aa17.77■□□□□ 0.44
CAPN2-201ENST00000295006 TSGA10IPQ3SY00 556 aa17.77■□□□□ 0.44
CAPN2-201ENST00000295006 MRFAP1L1Q96HT8 127 aa17.77■□□□□ 0.44
CAPN2-201ENST00000295006 PRDM1O75626 825 aa17.77■□□□□ 0.43
CAPN2-201ENST00000295006 IL2RBP14784 551 aa17.77■□□□□ 0.43
CAPN2-201ENST00000295006 MFSD6Q6ZSS7 791 aa17.77■□□□□ 0.43
CAPN2-201ENST00000295006 SH3TC1Q8TE82 1336 aa17.77■□□□□ 0.43
CAPN2-201ENST00000295006 SKIDA1Q1XH10 827 aa17.76■□□□□ 0.43
CAPN2-201ENST00000295006 DHX40Q8IX18 779 aaKnown RBP17.76■□□□□ 0.43
CAPN2-201ENST00000295006 NACAP1Q9BZK3 213 aa17.76■□□□□ 0.43
CAPN2-201ENST00000295006 MAP3K12Q12852 859 aa17.76■□□□□ 0.43
CAPN2-201ENST00000295006 TCIRG1Q13488 830 aa17.76■□□□□ 0.43
CAPN2-201ENST00000295006 GRAMD1CQ8IYS0 662 aa17.76■□□□□ 0.43
CAPN2-201ENST00000295006 CCDC34Q96HJ3 373 aa17.76■□□□□ 0.43
CAPN2-201ENST00000295006 JAG2Q9Y219 1238 aa17.76■□□□□ 0.43
CAPN2-201ENST00000295006 UTYO14607 1347 aa17.76■□□□□ 0.43
CAPN2-201ENST00000295006 BTBD18B2RXH4 712 aa17.76■□□□□ 0.43
CAPN2-201ENST00000295006 EXOSC10Q01780 885 aaKnown RBP17.76■□□□□ 0.43
CAPN2-201ENST00000295006 RABL6Q3YEC7 729 aaPredicted RBP17.76■□□□□ 0.43
CAPN2-201ENST00000295006 SENP2Q9HC62 589 aa17.76■□□□□ 0.43
CAPN2-201ENST00000295006 FANCLQ9NW38 375 aa17.76■□□□□ 0.43
CAPN2-201ENST00000295006 RTEL1Q9NZ71 1219 aa17.76■□□□□ 0.43
CAPN2-201ENST00000295006 SLC4A4Q9Y6R1 1079 aa17.76■□□□□ 0.43
CAPN2-201ENST00000295006 POLR2DO15514 142 aaKnown RBP17.75■□□□□ 0.43
CAPN2-201ENST00000295006 BRAPQ7Z569 592 aa17.75■□□□□ 0.43
CAPN2-201ENST00000295006 IL17RAQ96F46 866 aa17.75■□□□□ 0.43
CAPN2-201ENST00000295006 ARGLU1Q9NWB6 273 aaPredicted RBP17.75■□□□□ 0.43
CAPN2-201ENST00000295006 CBFA2T2O43439 604 aa17.75■□□□□ 0.43
CAPN2-201ENST00000295006 DHX58Q96C10 678 aa17.75■□□□□ 0.43
CAPN2-201ENST00000295006 WWC3Q9ULE0 1092 aa17.75■□□□□ 0.43
CAPN2-201ENST00000295006 ADKP55263 362 aaKnown RBP17.75■□□□□ 0.43
CAPN2-201ENST00000295006 CADPS2Q86UW7 1296 aa17.75■□□□□ 0.43
CAPN2-201ENST00000295006 FMR1NBQ8N0W7 255 aaPredicted RBP17.75■□□□□ 0.43
CAPN2-201ENST00000295006 CCDC150Q8NCX0 1101 aa17.75■□□□□ 0.43
CAPN2-201ENST00000295006 KCNH3Q9ULD8 1083 aa17.75■□□□□ 0.43
CAPN2-201ENST00000295006 NLRP12P59046 1061 aa17.74■□□□□ 0.43
CAPN2-201ENST00000295006 ACSBG1Q96GR2 724 aa17.74■□□□□ 0.43
CAPN2-201ENST00000295006 CABP5Q9NP86 173 aa17.74■□□□□ 0.43
CAPN2-201ENST00000295006 HLFQ16534 295 aa17.74■□□□□ 0.43
CAPN2-201ENST00000295006 MCAMP43121 646 aa17.74■□□□□ 0.43
CAPN2-201ENST00000295006 WTAPQ15007 396 aa17.74■□□□□ 0.43
CAPN2-201ENST00000295006 LZTFL1Q9NQ48 299 aa17.74■□□□□ 0.43
CAPN2-201ENST00000295006 PIK3C2AO00443 1686 aa17.74■□□□□ 0.43
CAPN2-201ENST00000295006 PRKAB2O43741 272 aa17.73■□□□□ 0.43
CAPN2-201ENST00000295006 MYL5Q02045 173 aa17.73■□□□□ 0.43
CAPN2-201ENST00000295006 KIF23Q02241 960 aaPredicted RBP17.73■□□□□ 0.43
CAPN2-201ENST00000295006 DIS3L2Q8IYB7 885 aaKnown RBP17.73■□□□□ 0.43
CAPN2-201ENST00000295006 KRT222Q8N1A0 295 aa17.73■□□□□ 0.43
CAPN2-201ENST00000295006 SMARCE1Q969G3 411 aa17.73■□□□□ 0.43
CAPN2-201ENST00000295006 DESI2Q9BSY9 194 aa17.73■□□□□ 0.43
CAPN2-201ENST00000295006 CARD6Q9BX69 1037 aa17.73■□□□□ 0.43
CAPN2-201ENST00000295006 OGFRQ9NZT2 677 aa17.73■□□□□ 0.43
CAPN2-201ENST00000295006 PCDHA5Q9Y5H7 936 aa17.73■□□□□ 0.43
CAPN2-201ENST00000295006 PCDH11XQ9BZA7 1347 aa17.73■□□□□ 0.43
CAPN2-201ENST00000295006 PCDH11YQ9BZA8 1340 aa17.73■□□□□ 0.43
CAPN2-201ENST00000295006 FOXN1O15353 648 aa17.73■□□□□ 0.43
CAPN2-201ENST00000295006 WDHD1O75717 1129 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms