RNA–Protein interactions for RNA: ENST00000290399.10

SIM2-201, Transcript of SIM bHLH transcription factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM2, Length 4,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM2-201ENST00000290399 NPHP4O75161 1426 aaPredicted RBP20.89■□□□□ 0.93
SIM2-201ENST00000290399 PICALMQ13492 652 aa20.89■□□□□ 0.93
SIM2-201ENST00000290399 CCDC24Q8N4L8 307 aa20.89■□□□□ 0.93
SIM2-201ENST00000290399 KRI1Q8N9T8 703 aaKnown RBP20.89■□□□□ 0.93
SIM2-201ENST00000290399 TRIM47Q96LD4 638 aa20.89■□□□□ 0.93
SIM2-201ENST00000290399 CABP5Q9NP86 173 aa20.89■□□□□ 0.93
SIM2-201ENST00000290399 HSPD1P10809 573 aaKnown RBP20.89■□□□□ 0.93
SIM2-201ENST00000290399 STAT6P42226 847 aa20.89■□□□□ 0.93
SIM2-201ENST00000290399 PUS3Q9BZE2 481 aaKnown RBP20.89■□□□□ 0.93
SIM2-201ENST00000290399 LDHBP07195 334 aaKnown RBP20.88■□□□□ 0.93
SIM2-201ENST00000290399 ZNF804AQ7Z570 1209 aa20.88■□□□□ 0.93
SIM2-201ENST00000290399 CLSTN2Q9H4D0 955 aa20.88■□□□□ 0.93
SIM2-201ENST00000290399 DENND2AQ9ULE3 1009 aa20.88■□□□□ 0.93
SIM2-201ENST00000290399 ASAP1Q9ULH1 1129 aa20.88■□□□□ 0.93
SIM2-201ENST00000290399 SETBP1Q9Y6X0 1596 aa20.88■□□□□ 0.93
SIM2-201ENST00000290399 RGS12O14924 1447 aa20.88■□□□□ 0.93
SIM2-201ENST00000290399 TMEM132AQ24JP5 1023 aa20.88■□□□□ 0.93
SIM2-201ENST00000290399 GPT2Q8TD30 523 aa20.88■□□□□ 0.93
SIM2-201ENST00000290399 PAXBP1Q9Y5B6 917 aa20.88■□□□□ 0.93
SIM2-201ENST00000290399 LMTK3Q96Q04 1460 aa20.88■□□□□ 0.93
SIM2-201ENST00000290399 EIF3JO75822 258 aaKnown RBP20.88■□□□□ 0.93
SIM2-201ENST00000290399 SPATA5Q8NB90 893 aa20.88■□□□□ 0.93
SIM2-201ENST00000290399 ANKRD2Q9GZV1 360 aa20.88■□□□□ 0.93
SIM2-201ENST00000290399 QRICH2Q9H0J4 1663 aa20.88■□□□□ 0.93
SIM2-201ENST00000290399 LMTK2Q8IWU2 1503 aa20.87■□□□□ 0.93
SIM2-201ENST00000290399 FGFR1OPO95684 399 aaKnown RBP20.87■□□□□ 0.93
SIM2-201ENST00000290399 CALML3P27482 149 aa20.87■□□□□ 0.93
SIM2-201ENST00000290399 NAPAP54920 295 aa20.87■□□□□ 0.93
SIM2-201ENST00000290399 STX17P56962 302 aa20.87■□□□□ 0.93
SIM2-201ENST00000290399 CCDC178Q5BJE1 867 aa20.87■□□□□ 0.93
SIM2-201ENST00000290399 KRT2P35908 639 aa20.87■□□□□ 0.93
SIM2-201ENST00000290399 CTSWP56202 376 aa20.87■□□□□ 0.93
SIM2-201ENST00000290399 CTDSPL2Q05D32 466 aa20.87■□□□□ 0.93
SIM2-201ENST00000290399 TDRD12Q587J7 1177 aaKnown RBP20.87■□□□□ 0.93
SIM2-201ENST00000290399 DIS3L2Q8IYB7 885 aaKnown RBP20.86■□□□□ 0.93
SIM2-201ENST00000290399 ZBTB38Q8NAP3 1195 aaPredicted RBP20.86■□□□□ 0.93
SIM2-201ENST00000290399 ZC3H12CQ9C0D7 883 aaKnown RBP20.86■□□□□ 0.93
SIM2-201ENST00000290399 ZSWIM4Q9H7M6 989 aa20.86■□□□□ 0.93
SIM2-201ENST00000290399 DNAI1Q9UI46 699 aa20.86■□□□□ 0.93
SIM2-201ENST00000290399 POLA2Q14181 598 aa20.86■□□□□ 0.93
SIM2-201ENST00000290399 SETD1BQ9UPS6 1966 aaKnown RBP20.86■□□□□ 0.93
SIM2-201ENST00000290399 CCDC66A2RUB6 948 aa20.86■□□□□ 0.93
SIM2-201ENST00000290399 SASH1O94885 1247 aa20.86■□□□□ 0.93
SIM2-201ENST00000290399 PCCAP05165 728 aaPredicted RBP20.86■□□□□ 0.93
SIM2-201ENST00000290399 HIBADHP31937 336 aaKnown RBP20.86■□□□□ 0.93
SIM2-201ENST00000290399 CCDC102AQ96A19 550 aa20.86■□□□□ 0.93
SIM2-201ENST00000290399 LRRC7Q96NW7 1537 aa20.85■□□□□ 0.93
SIM2-201ENST00000290399 PPP1R12BO60237 982 aaPredicted RBP20.85■□□□□ 0.93
SIM2-201ENST00000290399 ZNF589Q86UQ0 364 aaPredicted RBP20.85■□□□□ 0.93
SIM2-201ENST00000290399 CUL5Q93034 780 aa20.85■□□□□ 0.93
SIM2-201ENST00000290399 CBX8Q9HC52 389 aa20.85■□□□□ 0.93
SIM2-201ENST00000290399 RMND1Q9NWS8 449 aa20.85■□□□□ 0.93
SIM2-201ENST00000290399 PPRC1Q5VV67 1664 aaKnown RBP20.85■□□□□ 0.93
SIM2-201ENST00000290399 GOLGA6L9A6NEM1 432 aa20.85■□□□□ 0.93
SIM2-201ENST00000290399 MCM7P33993 719 aa20.85■□□□□ 0.93
SIM2-201ENST00000290399 FAM193AP78312 1265 aa20.85■□□□□ 0.93
SIM2-201ENST00000290399 RILPL1Q5EBL4 403 aa20.85■□□□□ 0.93
SIM2-201ENST00000290399 LIG1P18858 919 aa20.85■□□□□ 0.93
SIM2-201ENST00000290399 IQCEQ6IPM2 695 aa20.85■□□□□ 0.93
SIM2-201ENST00000290399 CUL4AQ13619 759 aa20.84■□□□□ 0.93
SIM2-201ENST00000290399 FAM98CQ17RN3 349 aaKnown RBP20.84■□□□□ 0.93
SIM2-201ENST00000290399 KRT40Q6A162 431 aa20.84■□□□□ 0.93
SIM2-201ENST00000290399 AXIN2Q9Y2T1 843 aa20.84■□□□□ 0.93
SIM2-201ENST00000290399 V9GY48 417 aaPredicted RBP20.84■□□□□ 0.93
SIM2-201ENST00000290399 ELP1O95163 1332 aa20.84■□□□□ 0.93
SIM2-201ENST00000290399 FGAP02671 866 aa20.84■□□□□ 0.93
SIM2-201ENST00000290399 PI4K2BQ8TCG2 481 aa20.84■□□□□ 0.93
SIM2-201ENST00000290399 MROH5Q6ZUA9 1318 aa20.84■□□□□ 0.93
SIM2-201ENST00000290399 DNA2P51530 1060 aa20.84■□□□□ 0.93
SIM2-201ENST00000290399 CGNQ9P2M7 1197 aaKnown RBP20.84■□□□□ 0.93
SIM2-201ENST00000290399 LAMC1P11047 1609 aa20.84■□□□□ 0.93
SIM2-201ENST00000290399 DEXIO95424 95 aa20.84■□□□□ 0.93
SIM2-201ENST00000290399 CCDC40Q4G0X9 1142 aa20.84■□□□□ 0.93
SIM2-201ENST00000290399 TRMT1LQ7Z2T5 733 aaKnown RBP20.84■□□□□ 0.93
SIM2-201ENST00000290399 TTC6Q86TZ1 520 aa20.84■□□□□ 0.93
SIM2-201ENST00000290399 EXOC1Q9NV70 894 aa20.84■□□□□ 0.93
SIM2-201ENST00000290399 TFCP2L1Q9NZI6 479 aa20.84■□□□□ 0.93
SIM2-201ENST00000290399 CCNL1Q9UK58 526 aaPredicted RBP20.84■□□□□ 0.93
SIM2-201ENST00000290399 CYP21A2P08686 494 aa20.83■□□□□ 0.93
SIM2-201ENST00000290399 LEKR1Q6ZMV7 388 aa20.83■□□□□ 0.93
SIM2-201ENST00000290399 PRDM10Q9NQV6 1147 aa20.83■□□□□ 0.93
SIM2-201ENST00000290399 MYO6Q9UM54 1294 aa20.83■□□□□ 0.93
SIM2-201ENST00000290399 MED14O60244 1454 aa20.83■□□□□ 0.93
SIM2-201ENST00000290399 KIF20AO95235 890 aa20.83■□□□□ 0.92
SIM2-201ENST00000290399 TRIM21P19474 475 aaKnown RBP20.83■□□□□ 0.92
SIM2-201ENST00000290399 PTPN12Q05209 780 aaKnown RBP20.83■□□□□ 0.92
SIM2-201ENST00000290399 PPP4R3BQ5MIZ7 849 aa20.83■□□□□ 0.92
SIM2-201ENST00000290399 TAF4BQ92750 862 aa20.83■□□□□ 0.92
SIM2-201ENST00000290399 CARD10Q9BWT7 1032 aa20.83■□□□□ 0.92
SIM2-201ENST00000290399 GREM2Q9H772 168 aa20.83■□□□□ 0.92
SIM2-201ENST00000290399 ADORA1P30542 326 aa20.82■□□□□ 0.92
SIM2-201ENST00000290399 MYL5Q02045 173 aa20.82■□□□□ 0.92
SIM2-201ENST00000290399 SPAG1Q07617 926 aa20.82■□□□□ 0.92
SIM2-201ENST00000290399 ZNF174Q15697 407 aa20.82■□□□□ 0.92
SIM2-201ENST00000290399 VWA3AA6NCI4 1184 aa20.82■□□□□ 0.92
SIM2-201ENST00000290399 SPECC1Q5M775 1068 aa20.82■□□□□ 0.92
SIM2-201ENST00000290399 KCNH3Q9ULD8 1083 aa20.82■□□□□ 0.92
SIM2-201ENST00000290399 TRAPPC3LQ5T215 181 aa20.82■□□□□ 0.92
SIM2-201ENST00000290399 TCERG1LQ5VWI1 586 aa20.82■□□□□ 0.92
SIM2-201ENST00000290399 JAKMIP3Q5VZ66 844 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms