RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 CEP126Q9P2H0 1117 aa13.05□□□□□ -0.32
SNF8-201ENST00000290330 ZNF70Q9UC06 446 aaPredicted RBP13.05□□□□□ -0.32
SNF8-201ENST00000290330 ANGEL1Q9UNK9 670 aaKnown RBP13.05□□□□□ -0.32
SNF8-201ENST00000290330 FZD1Q9UP38 647 aa13.05□□□□□ -0.32
SNF8-201ENST00000290330 TNNQ9UQP3 1299 aa13.05□□□□□ -0.32
SNF8-201ENST00000290330 GNAI3P08754 354 aa13.04□□□□□ -0.32
SNF8-201ENST00000290330 HDLBPQ00341 1268 aaKnown RBP13.04□□□□□ -0.32
SNF8-201ENST00000290330 RASA3Q14644 834 aa13.04□□□□□ -0.32
SNF8-201ENST00000290330 MAP3K11Q16584 847 aa13.04□□□□□ -0.32
SNF8-201ENST00000290330 SUPT20HL1Q3ZLR7 823 aa13.04□□□□□ -0.32
SNF8-201ENST00000290330 COPRSQ9NQ92 184 aa13.04□□□□□ -0.32
SNF8-201ENST00000290330 PA2G4Q9UQ80 394 aaKnown RBP13.04□□□□□ -0.32
SNF8-201ENST00000290330 SSC5DA1L4H1 1573 aa13.03□□□□□ -0.32
SNF8-201ENST00000290330 PPP1R12BO60237 982 aaPredicted RBP13.03□□□□□ -0.32
SNF8-201ENST00000290330 IL15P40933 162 aaPredicted RBP13.03□□□□□ -0.32
SNF8-201ENST00000290330 TNFAIP1Q13829 316 aa13.03□□□□□ -0.32
SNF8-201ENST00000290330 ATP2B3Q16720 1220 aa13.03□□□□□ -0.32
SNF8-201ENST00000290330 NBPF12Q5TAG4 269 aaPredicted RBP13.03□□□□□ -0.32
SNF8-201ENST00000290330 CLUAP1Q96AJ1 413 aa13.03□□□□□ -0.32
SNF8-201ENST00000290330 ABHD8Q96I13 439 aa13.03□□□□□ -0.32
SNF8-201ENST00000290330 MRIQ9BWK5 157 aa13.03□□□□□ -0.32
SNF8-201ENST00000290330 SUGT1Q9Y2Z0 365 aa13.03□□□□□ -0.32
SNF8-201ENST00000290330 SRGAP3O43295 1099 aa13.02□□□□□ -0.33
SNF8-201ENST00000290330 MKRN3Q13064 507 aaKnown RBP13.02□□□□□ -0.33
SNF8-201ENST00000290330 MTX1Q13505 466 aa13.02□□□□□ -0.33
SNF8-201ENST00000290330 TEKT1Q969V4 418 aa13.02□□□□□ -0.33
SNF8-201ENST00000290330 YTHDC1Q96MU7 727 aaKnown RBP13.02□□□□□ -0.33
SNF8-201ENST00000290330 ECM29Q5VYK3 1845 aa13.02□□□□□ -0.33
SNF8-201ENST00000290330 TCP10L2B9ZVM9 353 aa13.01□□□□□ -0.33
SNF8-201ENST00000290330 USP2O75604 605 aaPredicted RBP13.01□□□□□ -0.33
SNF8-201ENST00000290330 TM4SF4P48230 202 aa13.01□□□□□ -0.33
SNF8-201ENST00000290330 SPRYD7Q5W111 196 aa13.01□□□□□ -0.33
SNF8-201ENST00000290330 ZKSCAN2Q63HK3 967 aa13.01□□□□□ -0.33
SNF8-201ENST00000290330 WDR66Q8TBY9 1149 aa13.01□□□□□ -0.33
SNF8-201ENST00000290330 SLC10A4Q96EP9 437 aa13.01□□□□□ -0.33
SNF8-201ENST00000290330 CLMNQ96JQ2 1002 aa13.01□□□□□ -0.33
SNF8-201ENST00000290330 ZDHHC15Q96MV8 337 aa13.01□□□□□ -0.33
SNF8-201ENST00000290330 TEPSINQ96N21 525 aa13.01□□□□□ -0.33
SNF8-201ENST00000290330 ARAP2Q8WZ64 1704 aa13□□□□□ -0.33
SNF8-201ENST00000290330 MAST3O60307 1309 aa13□□□□□ -0.33
SNF8-201ENST00000290330 UNCXA6NJT0 531 aa13□□□□□ -0.33
SNF8-201ENST00000290330 APOBEC3HQ6NTF7 200 aaKnown RBP13□□□□□ -0.33
SNF8-201ENST00000290330 HHIPL2Q6UWX4 724 aa13□□□□□ -0.33
SNF8-201ENST00000290330 CDAN1Q8IWY9 1227 aa13□□□□□ -0.33
SNF8-201ENST00000290330 MCOLN1Q9GZU1 580 aa13□□□□□ -0.33
SNF8-201ENST00000290330 GNL3LQ9NVN8 582 aaKnown RBP13□□□□□ -0.33
SNF8-201ENST00000290330 CASP8AP2Q9UKL3 1982 aa13□□□□□ -0.33
SNF8-201ENST00000290330 ZBTB22O15209 634 aa12.99□□□□□ -0.33
SNF8-201ENST00000290330 GNAI2P04899 355 aa12.99□□□□□ -0.33
SNF8-201ENST00000290330 PHKA1P46020 1223 aa12.99□□□□□ -0.33
SNF8-201ENST00000290330 IREB2P48200 963 aaKnown RBP12.99□□□□□ -0.33
SNF8-201ENST00000290330 TNNI2P48788 182 aa12.99□□□□□ -0.33
SNF8-201ENST00000290330 CACNB3P54284 484 aa12.99□□□□□ -0.33
SNF8-201ENST00000290330 TIMM10P62072 90 aa12.99□□□□□ -0.33
SNF8-201ENST00000290330 SREBF2Q12772 1141 aa12.99□□□□□ -0.33
SNF8-201ENST00000290330 DGKZQ13574 1117 aa12.99□□□□□ -0.33
SNF8-201ENST00000290330 TMEM57Q8N5G2 664 aa12.99□□□□□ -0.33
SNF8-201ENST00000290330 TMEM39BQ9GZU3 492 aa12.99□□□□□ -0.33
SNF8-201ENST00000290330 ZBED9Q6R2W3 1325 aa12.98□□□□□ -0.33
SNF8-201ENST00000290330 SALL1Q9NSC2 1324 aa12.98□□□□□ -0.33
SNF8-201ENST00000290330 PNMA6EA0A0J9YXQ4 647 aa12.98□□□□□ -0.33
SNF8-201ENST00000290330 SEMA3EO15041 775 aa12.98□□□□□ -0.33
SNF8-201ENST00000290330 TBC1D8O95759 1140 aa12.98□□□□□ -0.33
SNF8-201ENST00000290330 ZBTB48P10074 688 aaPredicted RBP12.98□□□□□ -0.33
SNF8-201ENST00000290330 PRDX5P30044 214 aa12.98□□□□□ -0.33
SNF8-201ENST00000290330 ADORA1P30542 326 aa12.98□□□□□ -0.33
SNF8-201ENST00000290330 TFCP2Q12800 502 aa12.98□□□□□ -0.33
SNF8-201ENST00000290330 CCDC102BQ68D86 513 aa12.98□□□□□ -0.33
SNF8-201ENST00000290330 ANKRD13AQ8IZ07 590 aa12.98□□□□□ -0.33
SNF8-201ENST00000290330 WNK4Q96J92 1243 aa12.98□□□□□ -0.33
SNF8-201ENST00000290330 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.98□□□□□ -0.33
SNF8-201ENST00000290330 DENND2AQ9ULE3 1009 aa12.98□□□□□ -0.33
SNF8-201ENST00000290330 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.98□□□□□ -0.33
SNF8-201ENST00000290330 A0A1B0GUL7 405 aa12.97□□□□□ -0.33
SNF8-201ENST00000290330 INHBEP58166 350 aa12.97□□□□□ -0.33
SNF8-201ENST00000290330 DIXDC1Q155Q3 683 aa12.97□□□□□ -0.33
SNF8-201ENST00000290330 FKBP1CQ5VVH2 108 aa12.97□□□□□ -0.33
SNF8-201ENST00000290330 FAM83AQ86UY5 434 aa12.97□□□□□ -0.33
SNF8-201ENST00000290330 TMOD2Q9NZR1 351 aa12.97□□□□□ -0.33
SNF8-201ENST00000290330 AKAP2Q9Y2D5 859 aa12.97□□□□□ -0.33
SNF8-201ENST00000290330 AKAP11Q9UKA4 1901 aa12.97□□□□□ -0.33
SNF8-201ENST00000290330 MANSC4A6NHS7 340 aaPredicted RBP12.96□□□□□ -0.33
SNF8-201ENST00000290330 LDHBP07195 334 aaKnown RBP12.96□□□□□ -0.33
SNF8-201ENST00000290330 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.96□□□□□ -0.33
SNF8-201ENST00000290330 XAGE2Q96GT9 111 aa12.96□□□□□ -0.33
SNF8-201ENST00000290330 CFHR5Q9BXR6 569 aa12.96□□□□□ -0.33
SNF8-201ENST00000290330 DAGLAQ9Y4D2 1042 aa12.96□□□□□ -0.33
SNF8-201ENST00000290330 CCDC85CA6NKD9 419 aa12.95□□□□□ -0.34
SNF8-201ENST00000290330 RLBP1P12271 317 aa12.95□□□□□ -0.34
SNF8-201ENST00000290330 GJA5P36382 358 aa12.95□□□□□ -0.34
SNF8-201ENST00000290330 RASGRF1Q13972 1273 aa12.95□□□□□ -0.34
SNF8-201ENST00000290330 NOM1Q5C9Z4 860 aaKnown RBP12.95□□□□□ -0.34
SNF8-201ENST00000290330 CDC42EP5Q6NZY7 148 aa12.95□□□□□ -0.34
SNF8-201ENST00000290330 IFNL1Q8IU54 200 aa12.95□□□□□ -0.34
SNF8-201ENST00000290330 FTSJ3Q8IY81 847 aaKnown RBP12.95□□□□□ -0.34
SNF8-201ENST00000290330 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.95□□□□□ -0.343e-6■■■■■ 38.3
SNF8-201ENST00000290330 ZNF296Q8WUU4 475 aaPredicted RBP12.95□□□□□ -0.34
SNF8-201ENST00000290330 ELP3Q9H9T3 547 aa12.95□□□□□ -0.34
SNF8-201ENST00000290330 PDS5AQ29RF7 1337 aaKnown RBP12.94□□□□□ -0.34
SNF8-201ENST00000290330 GPR25O00155 361 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms