RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 IQCA1Q86XH1 822 aa14.36□□□□□ -0.11
SLC6A1-201ENST00000287766 HELLSQ9NRZ9 838 aa14.36□□□□□ -0.11
SLC6A1-201ENST00000287766 AXIN2Q9Y2T1 843 aa14.36□□□□□ -0.11
SLC6A1-201ENST00000287766 LUC7LQ9NQ29 371 aaKnown RBP14.35□□□□□ -0.11
SLC6A1-201ENST00000287766 ITGA6P23229 1130 aa14.35□□□□□ -0.11
SLC6A1-201ENST00000287766 ZNF397Q8NF99 534 aaPredicted RBP14.35□□□□□ -0.11
SLC6A1-201ENST00000287766 CTCFLQ8NI51 663 aaPredicted RBP14.35□□□□□ -0.11
SLC6A1-201ENST00000287766 NLRP5P59047 1200 aa14.35□□□□□ -0.11
SLC6A1-201ENST00000287766 SCRN1Q12765 414 aa14.35□□□□□ -0.11
SLC6A1-201ENST00000287766 IKQ13123 557 aaPredicted RBP14.35□□□□□ -0.11
SLC6A1-201ENST00000287766 SYT10Q6XYQ8 523 aa14.35□□□□□ -0.11
SLC6A1-201ENST00000287766 MYO3AQ8NEV4 1616 aa14.35□□□□□ -0.11
SLC6A1-201ENST00000287766 NLRP1Q9C000 1473 aa14.35□□□□□ -0.11
SLC6A1-201ENST00000287766 MAP2K1Q02750 393 aaPredicted RBP14.34□□□□□ -0.11
SLC6A1-201ENST00000287766 SEPT7Q16181 437 aaKnown RBP14.34□□□□□ -0.11
SLC6A1-201ENST00000287766 RTN1Q16799 776 aa14.34□□□□□ -0.11
SLC6A1-201ENST00000287766 PI16Q6UXB8 463 aa14.34□□□□□ -0.11
SLC6A1-201ENST00000287766 CDK5RAP3Q96JB5 506 aa14.34□□□□□ -0.11
SLC6A1-201ENST00000287766 ATP10DQ9P241 1426 aa14.34□□□□□ -0.11
SLC6A1-201ENST00000287766 MBD4O95243 580 aa14.34□□□□□ -0.11
SLC6A1-201ENST00000287766 CEP57Q86XR8 500 aa14.34□□□□□ -0.11
SLC6A1-201ENST00000287766 hCG_1642624A0A1W2PR95 340 aa14.34□□□□□ -0.11
SLC6A1-201ENST00000287766 HSPD1P10809 573 aaKnown RBP14.34□□□□□ -0.11
SLC6A1-201ENST00000287766 GBP2P32456 591 aaPredicted RBP14.34□□□□□ -0.11
SLC6A1-201ENST00000287766 USP5P45974 858 aa14.34□□□□□ -0.11
SLC6A1-201ENST00000287766 STIM1Q13586 685 aa14.34□□□□□ -0.11
SLC6A1-201ENST00000287766 NECTIN1Q15223 517 aa14.34□□□□□ -0.11
SLC6A1-201ENST00000287766 DZIP3Q86Y13 1208 aaKnown RBP14.34□□□□□ -0.11
SLC6A1-201ENST00000287766 CEP131Q9UPN4 1083 aa14.34□□□□□ -0.11
SLC6A1-201ENST00000287766 LMTK2Q8IWU2 1503 aa14.34□□□□□ -0.11
SLC6A1-201ENST00000287766 MATR3P43243 847 aaKnown RBP eCLIP14.34□□□□□ -0.11
SLC6A1-201ENST00000287766 MYRIPQ8NFW9 859 aa14.34□□□□□ -0.11
SLC6A1-201ENST00000287766 DHX58Q96C10 678 aa14.34□□□□□ -0.11
SLC6A1-201ENST00000287766 MKNK2Q9HBH9 465 aa14.34□□□□□ -0.11
SLC6A1-201ENST00000287766 GPHNQ9NQX3 736 aaPredicted RBP14.34□□□□□ -0.11
SLC6A1-201ENST00000287766 IGKV5-2P06315 115 aa14.33□□□□□ -0.11
SLC6A1-201ENST00000287766 ADORA1P30542 326 aa14.33□□□□□ -0.11
SLC6A1-201ENST00000287766 CYP2E1P05181 493 aaPredicted RBP14.33□□□□□ -0.12
SLC6A1-201ENST00000287766 TTC31Q49AM3 519 aaPredicted RBP14.33□□□□□ -0.12
SLC6A1-201ENST00000287766 CMTR1Q8N1G2 835 aaKnown RBP14.33□□□□□ -0.12
SLC6A1-201ENST00000287766 PRDM1O75626 825 aa14.33□□□□□ -0.12
SLC6A1-201ENST00000287766 IVLP07476 585 aa14.33□□□□□ -0.12
SLC6A1-201ENST00000287766 ADD1P35611 737 aaKnown RBP14.33□□□□□ -0.12
SLC6A1-201ENST00000287766 MICALCLQ6ZW33 695 aa14.33□□□□□ -0.12
SLC6A1-201ENST00000287766 CATIPQ7Z7H3 387 aa14.33□□□□□ -0.12
SLC6A1-201ENST00000287766 ARMT1Q9H993 441 aa14.33□□□□□ -0.12
SLC6A1-201ENST00000287766 VAT1LQ9HCJ6 419 aa14.33□□□□□ -0.12
SLC6A1-201ENST00000287766 MROH2AA6NES4 1674 aa14.33□□□□□ -0.12
SLC6A1-201ENST00000287766 NF2P35240 595 aa14.33□□□□□ -0.12
SLC6A1-201ENST00000287766 TEX13AQ9BXU3 409 aaPredicted RBP14.33□□□□□ -0.12
SLC6A1-201ENST00000287766 NRXN1Q9ULB1 1477 aa14.32□□□□□ -0.12
SLC6A1-201ENST00000287766 CRB1P82279 1406 aa14.32□□□□□ -0.12
SLC6A1-201ENST00000287766 PTPN21Q16825 1174 aa14.32□□□□□ -0.12
SLC6A1-201ENST00000287766 RNF41Q9H4P4 317 aaPredicted RBP14.32□□□□□ -0.12
SLC6A1-201ENST00000287766 CTDSPL2Q05D32 466 aa14.32□□□□□ -0.12
SLC6A1-201ENST00000287766 ZRSR2Q15696 482 aaKnown RBP14.32□□□□□ -0.12
SLC6A1-201ENST00000287766 MRVI1Q9Y6F6 885 aa14.32□□□□□ -0.12
SLC6A1-201ENST00000287766 UQCRFS1P1P0C7P4 283 aa14.32□□□□□ -0.12
SLC6A1-201ENST00000287766 HLTFQ14527 1009 aaKnown RBP eCLIP14.32□□□□□ -0.12
SLC6A1-201ENST00000287766 VPS18Q9P253 973 aa14.32□□□□□ -0.12
SLC6A1-201ENST00000287766 NIP7Q9Y221 180 aaKnown RBP eCLIP14.32□□□□□ -0.12
SLC6A1-201ENST00000287766 PTPN12Q05209 780 aaKnown RBP14.31□□□□□ -0.12
SLC6A1-201ENST00000287766 ANO1Q5XXA6 986 aa14.31□□□□□ -0.12
SLC6A1-201ENST00000287766 DZIP1Q86YF9 867 aaKnown RBP14.31□□□□□ -0.12
SLC6A1-201ENST00000287766 APPBP2Q92624 585 aa14.31□□□□□ -0.12
SLC6A1-201ENST00000287766 TAF4BQ92750 862 aa14.31□□□□□ -0.12
SLC6A1-201ENST00000287766 HAUS7Q99871 368 aa14.31□□□□□ -0.12
SLC6A1-201ENST00000287766 COPRSQ9NQ92 184 aa14.31□□□□□ -0.12
SLC6A1-201ENST00000287766 TSPY2A6NKD2 308 aa14.31□□□□□ -0.12
SLC6A1-201ENST00000287766 DDIT3P35638 169 aa14.31□□□□□ -0.12
SLC6A1-201ENST00000287766 NUP88Q99567 741 aaPredicted RBP14.31□□□□□ -0.12
SLC6A1-201ENST00000287766 UTP14AQ9BVJ6 771 aaKnown RBP14.31□□□□□ -0.12
SLC6A1-201ENST00000287766 ANKIB1Q9P2G1 1089 aa14.31□□□□□ -0.12
SLC6A1-201ENST00000287766 ZNF202O95125 648 aa14.31□□□□□ -0.12
SLC6A1-201ENST00000287766 KARSQ15046 597 aaKnown RBP14.31□□□□□ -0.12
SLC6A1-201ENST00000287766 BCL2L12Q9HB09 334 aa14.31□□□□□ -0.12
SLC6A1-201ENST00000287766 GJB4Q9NTQ9 266 aa14.31□□□□□ -0.12
SLC6A1-201ENST00000287766 ATP6V1AP38606 617 aa14.31□□□□□ -0.12
SLC6A1-201ENST00000287766 PAFAH1B1P43034 410 aa14.31□□□□□ -0.12
SLC6A1-201ENST00000287766 KRBA2Q6ZNG9 492 aa14.31□□□□□ -0.12
SLC6A1-201ENST00000287766 CCDC150Q8NCX0 1101 aa14.31□□□□□ -0.12
SLC6A1-201ENST00000287766 AK9Q5TCS8 1911 aa14.3□□□□□ -0.12
SLC6A1-201ENST00000287766 FGAP02671 866 aa14.3□□□□□ -0.12
SLC6A1-201ENST00000287766 SOGA3Q5TF21 947 aa14.3□□□□□ -0.12
SLC6A1-201ENST00000287766 KCNJ14Q9UNX9 436 aa14.3□□□□□ -0.12
SLC6A1-201ENST00000287766 IFFO1Q0D2I5 559 aa14.3□□□□□ -0.12
SLC6A1-201ENST00000287766 CCDC24Q8N4L8 307 aa14.3□□□□□ -0.12
SLC6A1-201ENST00000287766 TCEAL9Q9UHQ7 104 aa14.3□□□□□ -0.12
SLC6A1-201ENST00000287766 CCDC175P0C221 793 aa14.3□□□□□ -0.12
SLC6A1-201ENST00000287766 SPA17Q15506 151 aa14.3□□□□□ -0.12
SLC6A1-201ENST00000287766 ATRIPQ8WXE1 791 aa14.3□□□□□ -0.12
SLC6A1-201ENST00000287766 CCDC43Q96MW1 224 aaKnown RBP14.3□□□□□ -0.12
SLC6A1-201ENST00000287766 LLPHQ9BRT6 129 aaKnown RBP14.3□□□□□ -0.12
SLC6A1-201ENST00000287766 STX8Q9UNK0 236 aa14.3□□□□□ -0.12
SLC6A1-201ENST00000287766 ANGEL1Q9UNK9 670 aaKnown RBP14.3□□□□□ -0.12
SLC6A1-201ENST00000287766 PCDH11XQ9BZA7 1347 aa14.29□□□□□ -0.12
SLC6A1-201ENST00000287766 PCDH11YQ9BZA8 1340 aa14.29□□□□□ -0.12
SLC6A1-201ENST00000287766 TTC14Q96N46 770 aa14.29□□□□□ -0.12
SLC6A1-201ENST00000287766 CABP5Q9NP86 173 aa14.29□□□□□ -0.12
SLC6A1-201ENST00000287766 BTG4Q9NY30 223 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 331.7 ms